RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ACOT1Q86TX2 421 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BANPQ8N9N5 519 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PAFAH2Q99487 392 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PTPN18Q99952 460 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KLC2Q9H0B6 622 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SLC40A1Q9NP59 571 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TBK1Q9UHD2 729 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 IQANK1A0A1B0GTG1 560 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KPNA6O60684 536 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DHRS4L1P0CG22 281 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GNAT1P11488 350 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MLNP12872 115 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CCNB1P14635 433 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FOXN2P32314 431 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC45A4Q5BKX6 768 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZNF276Q8N554 614 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FBF1Q8TES7 1133 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 OLFM3Q96PB7 478 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC9A7Q96T83 725 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 EIF2B3Q9NR50 452 aaKnown RBP11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TMEM51Q9NW97 253 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KLHL14Q9P2G3 628 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RAD54BQ9Y620 910 aa11.15□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TCRBV7S3A2A0A539 114 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 A8MXQ7 604 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GABRDO14764 452 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PPEF2O14830 753 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 EDF1O60869 148 aaKnown RBP11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DAB1O75553 588 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ATP5HO75947 161 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KRT15P19012 456 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PAX3P23760 479 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RPAINQ86UA6 219 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PALM2Q8IXS6 379 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ANKRD42Q8N9B4 389 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KLC4Q9NSK0 619 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 KLF11O14901 512 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MATKP42679 507 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MSH2P43246 934 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SEMA5AQ13591 1074 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DBN1Q16643 649 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC25A52Q3SY17 297 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TMEM130Q8N3G9 435 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 C2orf69Q8N8R5 385 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 APPL2Q8NEU8 664 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 OSMRQ99650 979 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NXF3Q9H4D5 531 aaKnown RBP11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GJD2Q9UKL4 321 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TRPM7Q96QT4 1865 aa11.14□□□□□ -0.63
TRAF3IP2-201ENST00000340026 C9IYK1 514 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 POC1B-GALNT4F8VUJ3 575 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PPP1R12AO14974 1030 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DGKIO75912 1065 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TGDSO95455 350 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SSTR1P30872 391 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 GJA9P57773 515 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FBXW10Q5XX13 1052 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 OR6B3Q8NGW1 331 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MGARPQ8TDB4 240 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 C18orf25Q96B23 403 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SLC2A13Q96QE2 648 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 DUSP16Q9BY84 665 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TRIM6Q9C030 488 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CDHR5Q9HBB8 845 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 XAB2Q9HCS7 855 aaKnown RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 USH1CQ9Y6N9 552 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 TCRBV9S1A1TA0A576 114 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZBED1O96006 694 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 FGFR1P11362 822 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CYP2F1P24903 491 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 RPA3P35244 121 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CCNFP41002 786 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NEK3P51956 506 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 YWHAZP63104 245 aaKnown RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 BASP1P80723 227 aaKnown RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CYB5D1Q6P9G0 228 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 ASRGL1Q7L266 308 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 SCUBE3Q8IX30 993 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 MTBPQ96DY7 904 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PGAP3Q96FM1 320 aaPredicted RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PPP1R10Q96QC0 940 aaKnown RBP11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 PPP1R16BQ96T49 567 aa11.13□□□□□ -0.63
TRAF3IP2-201ENST00000340026 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms