RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SRP72O76094 671 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SERPINF2P08697 491 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 PYGBP11216 843 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 LAG3P18627 525 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ACAP1Q15027 740 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SHROOM1Q2M3G4 852 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 LGI2Q8N0V4 545 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 RIBC1Q8N443 379 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SKA1Q96BD8 255 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 WWP1Q9H0M0 922 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 KCNF1Q9H3M0 494 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 NCKAP1Q9Y2A7 1128 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 CASZ1Q86V15 1759 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 GOLGA8RI6L899 631 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SOAT2O75908 522 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 PCDH8O95206 1070 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ATP5BP06576 529 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 CARSP49589 748 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SCNN1BP51168 640 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 EIF2B5Q13144 721 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 HSDL1Q3SXM5 330 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ANO5Q75V66 913 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 EFL1Q7Z2Z2 1120 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 LPPQ93052 612 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 PCMTD2Q9NV79 361 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 MARCH2Q9P0N8 246 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 MRPS23Q9Y3D9 190 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 RPS6KL1Q9Y6S9 549 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 H2AFYO75367 372 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 VPS26AO75436 327 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 INHAP05111 366 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ICAM3P32942 547 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 PPP3CCP48454 512 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 NCKAP1LP55160 1127 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 PSMD5Q16401 504 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 NFIL3Q16649 462 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 FAM83EQ2M2I3 478 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 HECTD3Q5T447 861 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 DDX42Q86XP3 938 aaKnown RBP eCLIP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SCUBE3Q8IX30 993 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 MTBPQ96DY7 904 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ULBP1Q9BZM6 244 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ROPN1BQ9BZX4 212 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 UBE2OQ9C0C9 1292 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 LRRC40Q9H9A6 602 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SLC28A3Q9HAS3 691 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ROPN1Q9HAT0 212 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 GYG2O15488 501 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 FGBP02675 491 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SPDYE7PQ495Y7 208 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 DUSP9Q99956 384 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 FAM167BQ9BTA0 163 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 RBM22Q9NW64 420 aaKnown RBP eCLIP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 STK39Q9UEW8 545 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 ANGPTL2Q9UKU9 493 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SLC39A10Q9ULF5 831 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 GRID1Q9ULK0 1009 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
NIPAL3-201ENST00000003912 SHPRHQ149N8 1683 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 IGSF6O95976 241 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SGCGQ13326 291 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SNCBQ16143 134 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 FAXCQ5TGI0 409 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 PACSIN1Q9BY11 444 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 CLPBQ9H078 707 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 ISCUQ9H1K1 167 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SMYD3Q9H7B4 428 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 DERAQ9Y315 318 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 RBAK-RBAKDNI3L0D1 243 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 TADA3O75528 432 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 MAP3K6O95382 1288 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 DARSP14868 501 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 NPR3P17342 541 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 VCPP55072 806 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 LRRC14Q15048 493 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 UGCGQ16739 394 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 BEND6Q5SZJ8 279 aaPredicted RBP10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 TEDDM1Q5T9Z0 273 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 PKN3Q6P5Z2 889 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SLC9A9Q8IVB4 645 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 MMGT1Q8N4V1 131 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 FICDQ9BVA6 458 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SPG21Q9NZD8 308 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 GMNCA6NCL1 334 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 OR6C75A6NL08 312 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 TISP43B9A030 160 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 E2F6O75461 281 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 VSNL1P62760 191 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 MAPK7Q13164 816 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 STX3Q13277 289 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 CNGA2Q16280 664 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 LRRC8DQ7L1W4 858 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 SH3RF1Q7Z6J0 888 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 LRRC52Q8N7C0 313 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 AGR3Q8TD06 166 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 HSFY1Q96LI6 401 aa10.69□□□□□ -0.7
NIPAL3-201ENST00000003912 LRRC37BQ96QE4 947 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms