RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Cul2Q9D4H8 745 aa17.12■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 AlpiF8VPQ6 554 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rrm1P07742 792 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rgs9bpQ148R9 237 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Cyp2c66Q5GLZ0 490 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tas2r115Q7M719 310 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rpp40Q8R1F9 363 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 PdgfdQ925I7 370 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Oxct1Q9D0K2 520 aaKnown RBP17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Bmpr2O35607 1038 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Mgat3Q10470 538 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 HexdcQ3U4H6 486 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gcnt3Q5JCT0 437 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ccdc85bQ6PDY0 202 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rnf135Q9CWS1 417 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 MsraQ9D6Y7 233 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Sfmbt1Q9JMD1 863 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pon1P52430 355 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CkbQ04447 381 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fbxw2Q60584 422 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Dna2Q6ZQJ5 1062 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Nxnl1Q8VC33 217 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rwdd4Q9CPR1 188 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Sun1Q9D666 913 aaKnown RBP17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Krt6bQ9Z331 562 aa17.11■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fam83fQ3UKU4 495 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pick1Q62083 416 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tcaf3Q6QR59 914 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Suz12Q80U70 741 aaKnown RBP17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Igdcc3Q8BQC3 813 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 4932414N04RikQ8CEQ9 752 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tp53bp2Q8CG79 1128 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Cd300ldQ8VCH2 221 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Foxn2E9Q7L6 429 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Usp17ldG5E8G2 545 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Usp17lcG5E8I7 545 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gm3755K7N743 167 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Clk2O35491 499 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Elk3P41971 409 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pcyt1aP49586 367 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CamkvQ3UHL1 512 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Cyp3a13Q64464 503 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Vwa1Q8R2Z5 415 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Caap1Q8VDY9 356 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Cldn3Q9Z0G9 219 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Magea10A2AMW4 325 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Dennd5bA2RSQ0 1274 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tcp10cE9Q046 482 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Tmc8Q7TN58 722 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Disc1Q811T9 852 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gga3Q8BMI3 718 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Prl7b1Q8CGZ9 251 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Dis3Q9CSH3 958 aaKnown RBP17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ttll9A2APC3 461 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ssxb9A2BI93 185 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Slc27a6E9Q9W4 619 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfr611K7N609 323 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfr612L7N462 323 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ctnnd2O35927 1247 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Srpk1O70551 648 aaKnown RBP17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 IgfalsP70389 603 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rbp1Q00915 135 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Kirrel3Q8BR86 778 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Sirt2Q8VDQ8 389 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rab11fip1Q9D620 645 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 S1pr4Q9Z0L1 386 aa17.1■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ttc30a2A2AKQ8 664 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pola2P33611 600 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 AurkaP97477 395 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pla2g4dQ50L43 825 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gba2Q69ZF3 918 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Ppp1r3gQ9CW07 347 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CinpQ9D0V8 212 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 TcimQ9D915 106 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 AvenQ9D9K3 342 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rnf25Q9QZR0 456 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Znf804aA2AKY4 1200 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Lilra5D3Z7A9 295 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Kcnu1O54982 1121 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 TpbpaP13438 124 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fgfr1P16092 822 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Glud1P26443 558 aaKnown RBP17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 AmhP27106 555 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rpl10aP53026 217 aaKnown RBP17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CartptP56388 129 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Plk4Q64702 925 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Rtl3Q6P1Y1 553 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Olfr1057Q7TR75 315 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Aldh4a1Q8CHT0 562 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Eif3lQ8QZY1 564 aaKnown RBP17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 CoprsQ9CQ13 173 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Gipc2Q9Z2H7 314 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Orm2P07361 207 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pou2f3P31362 431 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pkn2Q8BWW9 983 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Pqbp1Q91VJ5 263 aaKnown RBP17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Txndc9Q9CQ79 226 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Fam227bQ9D518 532 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Acsl4Q9QUJ7 711 aa17.09■□□□□ 0.33
Ubfd1-201ENSMUST00000033158 Prrg1A2BFE8 218 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms