Protein–RNA interactions for Protein: Q6QR59

Tcaf3, TRPM8 channel-associated factor 3, mousemouse

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf3Q6QR59 Gm25239-201ENSMUST00000174915 86 ntBASIC43.27■■■■■ 4.52
Tcaf3Q6QR59 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.17■■■■■ 4.02
Tcaf3Q6QR59 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
Tcaf3Q6QR59 Gm24109-201ENSMUST00000175489 103 ntBASIC37.64■■■■□ 3.62
Tcaf3Q6QR59 Gm15042-201ENSMUST00000120212 883 ntBASIC37.51■■■■□ 3.6
Tcaf3Q6QR59 Gm15045-201ENSMUST00000117359 883 ntBASIC36.64■■■■□ 3.46
Tcaf3Q6QR59 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Tcaf3Q6QR59 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.51■■■■□ 3.44
Tcaf3Q6QR59 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
Tcaf3Q6QR59 Gm23366-201ENSMUST00000175022 89 ntBASIC36.06■■■■□ 3.36
Tcaf3Q6QR59 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Tcaf3Q6QR59 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Tcaf3Q6QR59 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Tcaf3Q6QR59 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.25■■■■□ 3.23
Tcaf3Q6QR59 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Tcaf3Q6QR59 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.96■■■■□ 3.19
Tcaf3Q6QR59 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.85■■■■□ 3.17
Tcaf3Q6QR59 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Tcaf3Q6QR59 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
Tcaf3Q6QR59 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
Tcaf3Q6QR59 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Tcaf3Q6QR59 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Tcaf3Q6QR59 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Tcaf3Q6QR59 Gm25238-201ENSMUST00000174914 89 ntBASIC34.27■■■■□ 3.08
Tcaf3Q6QR59 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Tcaf3Q6QR59 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.19■■■■□ 3.06
Tcaf3Q6QR59 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Tcaf3Q6QR59 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.13■■■■□ 3.05
Tcaf3Q6QR59 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Tcaf3Q6QR59 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Tcaf3Q6QR59 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.82■■■■□ 3
Tcaf3Q6QR59 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
Tcaf3Q6QR59 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.95
Tcaf3Q6QR59 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.43■■■□□ 2.94
Tcaf3Q6QR59 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Tcaf3Q6QR59 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Tcaf3Q6QR59 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
Tcaf3Q6QR59 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.18■■■□□ 2.9
Tcaf3Q6QR59 Psd-208ENSMUST00000224556 2034 ntBASIC33.13■■■□□ 2.89
Tcaf3Q6QR59 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Tcaf3Q6QR59 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
Tcaf3Q6QR59 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Tcaf3Q6QR59 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.01■■■□□ 2.87
Tcaf3Q6QR59 Gm25262-201ENSMUST00000174934 133 ntBASIC32.91■■■□□ 2.86
Tcaf3Q6QR59 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.82■■■□□ 2.84
Tcaf3Q6QR59 Gm27325-201ENSMUST00000175467 74 ntBASIC32.81■■■□□ 2.84
Tcaf3Q6QR59 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.72■■■□□ 2.83
Tcaf3Q6QR59 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Tcaf3Q6QR59 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Tcaf3Q6QR59 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Tcaf3Q6QR59 Rab21-202ENSMUST00000218831 843 ntBASIC32.38■■■□□ 2.77
Tcaf3Q6QR59 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.35■■■□□ 2.77
Tcaf3Q6QR59 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.33■■■□□ 2.77
Tcaf3Q6QR59 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
Tcaf3Q6QR59 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.32■■■□□ 2.76
Tcaf3Q6QR59 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Tcaf3Q6QR59 Gm26115-201ENSMUST00000175605 87 ntBASIC32.2■■■□□ 2.75
Tcaf3Q6QR59 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.2■■■□□ 2.74
Tcaf3Q6QR59 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Tcaf3Q6QR59 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Tcaf3Q6QR59 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.06■■■□□ 2.72
Tcaf3Q6QR59 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Tcaf3Q6QR59 Gm8109-201ENSMUST00000194076 746 ntBASIC32.05■■■□□ 2.72
Tcaf3Q6QR59 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.05■■■□□ 2.72
Tcaf3Q6QR59 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.04■■■□□ 2.72
Tcaf3Q6QR59 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Tcaf3Q6QR59 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.01■■■□□ 2.72
Tcaf3Q6QR59 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Tcaf3Q6QR59 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Tcaf3Q6QR59 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Tcaf3Q6QR59 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
Tcaf3Q6QR59 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Tcaf3Q6QR59 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tcaf3Q6QR59 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tcaf3Q6QR59 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.76■■■□□ 2.68
Tcaf3Q6QR59 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Tcaf3Q6QR59 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.71■■■□□ 2.67
Tcaf3Q6QR59 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tcaf3Q6QR59 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.67■■■□□ 2.66
Tcaf3Q6QR59 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Tcaf3Q6QR59 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Tcaf3Q6QR59 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tcaf3Q6QR59 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Tcaf3Q6QR59 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Tcaf3Q6QR59 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tcaf3Q6QR59 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tcaf3Q6QR59 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.37■■■□□ 2.61
Tcaf3Q6QR59 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tcaf3Q6QR59 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Tcaf3Q6QR59 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.28■■■□□ 2.6
Tcaf3Q6QR59 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tcaf3Q6QR59 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.27■■■□□ 2.6
Tcaf3Q6QR59 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.22■■■□□ 2.59
Tcaf3Q6QR59 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Tcaf3Q6QR59 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Tcaf3Q6QR59 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
Tcaf3Q6QR59 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tcaf3Q6QR59 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.13■■■□□ 2.57
Tcaf3Q6QR59 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tcaf3Q6QR59 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms