RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W IML1P47170 1584 aa-1.97□□□□□ -2.72
LOC1YFR001W YOR093CQ12275 1648 aa-1.97□□□□□ -2.72
LOC1YFR001W YSY6P38374 65 aa-1.97□□□□□ -2.72
LOC1YFR001W BCK1Q01389 1478 aa-1.97□□□□□ -2.72
LOC1YFR001W RPO31P04051 1460 aa-1.98□□□□□ -2.73
LOC1YFR001W YMR105W-AQ8TGS8 64 aa-1.98□□□□□ -2.73
LOC1YFR001W TY1B-DR4Q07793 1604 aa-1.99□□□□□ -2.73
LOC1YFR001W RRP5Q05022 1729 aaKnown RBP-1.99□□□□□ -2.73
LOC1YFR001W YFL041W-AQ3E817 63 aa-2□□□□□ -2.73
LOC1YFR001W FLO1P32768 1537 aa-2.02□□□□□ -2.73
LOC1YFR001W PDR5P33302 1511 aaKnown RBP-2.02□□□□□ -2.73
LOC1YFR001W VMR1P38735 1592 aa-2.06□□□□□ -2.74
LOC1YFR001W YHR213W-AQ8TGT4 77 aa-2.07□□□□□ -2.74
LOC1YFR001W YIL102C-AQ2V2P5 75 aa-2.09□□□□□ -2.74
LOC1YFR001W TCB3Q03640 1545 aaKnown RBP-2.1□□□□□ -2.75
LOC1YFR001W YPR010C-AA5Z2X5 72 aa-2.11□□□□□ -2.75
LOC1YFR001W YHR073W-AP0C5N7 58 aa-2.13□□□□□ -2.75
LOC1YFR001W YCF1P39109 1515 aaKnown RBP-2.13□□□□□ -2.75
LOC1YFR001W DOP1Q03921 1698 aa-2.14□□□□□ -2.75
LOC1YFR001W SSK2P53599 1579 aa-2.15□□□□□ -2.75
LOC1YFR001W PAI3P01094 68 aa-2.16□□□□□ -2.76
LOC1YFR001W NUP159P40477 1460 aa-2.17□□□□□ -2.76
LOC1YFR001W YJL133C-AQ3E7A3 74 aa-2.18□□□□□ -2.76
LOC1YFR001W VPS13Q07878 3144 aa-2.19□□□□□ -2.76
LOC1YFR001W SCC2Q04002 1493 aa-2.19□□□□□ -2.76
LOC1YFR001W DDR2P89113 61 aa-2.26□□□□□ -2.77
LOC1YFR001W ULS1Q08562 1619 aa-2.27□□□□□ -2.77
LOC1YFR001W COX9P07255 59 aa-2.27□□□□□ -2.77
LOC1YFR001W MYO4P32492 1471 aa-2.27□□□□□ -2.77
LOC1YFR001W YBT1P32386 1661 aa-2.28□□□□□ -2.77
LOC1YFR001W STU1P38198 1513 aa-2.29□□□□□ -2.78
LOC1YFR001W NUP188P52593 1655 aaKnown RBP-2.29□□□□□ -2.78
LOC1YFR001W GCN2P15442 1659 aa-2.34□□□□□ -2.78
LOC1YFR001W CDC25P04821 1589 aa-2.35□□□□□ -2.79
LOC1YFR001W ATG2P53855 1592 aa-2.36□□□□□ -2.79
LOC1YFR001W YKL023C-AQ2V2P3 75 aa-2.38□□□□□ -2.79
LOC1YFR001W SKI3P17883 1432 aaKnown RBP-2.39□□□□□ -2.79
LOC1YFR001W VMA9Q3E7B6 73 aa-2.39□□□□□ -2.79
LOC1YFR001W BUD3P25558 1636 aa-2.42□□□□□ -2.8
LOC1YFR001W YLR342W-AQ3E810 57 aa-2.42□□□□□ -2.8
LOC1YFR001W NUP170P38181 1502 aa-2.47□□□□□ -2.8
LOC1YFR001W YJL127C-BQ3E828 52 aa-2.51□□□□□ -2.81
LOC1YFR001W PMP3P87284 55 aa-2.57□□□□□ -2.82
LOC1YFR001W PEP1P32319 1579 aa-2.57□□□□□ -2.82
LOC1YFR001W HIR3P47171 1648 aa-2.6□□□□□ -2.83
LOC1YFR001W YFR010W-AP0C5N0 62 aa-2.63□□□□□ -2.83
LOC1YFR001W SMX2P40204 77 aaKnown RBP-2.63□□□□□ -2.83
LOC1YFR001W NUP192P47054 1683 aa-2.63□□□□□ -2.83
LOC1YFR001W YLL066W-BQ8TGJ7 56 aa-2.64□□□□□ -2.83
LOC1YFR001W TOM1Q03280 3268 aa-2.69□□□□□ -2.84
LOC1YFR001W USO1P25386 1790 aa-2.74□□□□□ -2.85
LOC1YFR001W HOR7Q05827 59 aa-2.75□□□□□ -2.85
LOC1YFR001W SPT6P23615 1451 aaKnown RBP-2.78□□□□□ -2.86
LOC1YFR001W RKR1Q04781 1562 aa-2.78□□□□□ -2.86
LOC1YFR001W MON2P48563 1636 aaPredicted RBP-2.86□□□□□ -2.87
LOC1YFR001W CHC1P22137 1653 aaKnown RBP-2.95□□□□□ -2.88
LOC1YFR001W TOM7P53507 60 aa-2.98□□□□□ -2.89
LOC1YFR001W MLP2P40457 1679 aa-3.06□□□□□ -2.9
LOC1YFR001W NCE101Q02820 53 aa-3.29□□□□□ -2.94
LOC1YFR001W Q0297Q9ZZV8 51 aa-3.54□□□□□ -2.98
LOC1YFR001W RPL39P04650 51 aa-3.59□□□□□ -2.98
LOC1YFR001W YIL046W-AQ3E7Z4 54 aa-3.96□□□□□ -3.04
LOC1YFR001W YDR034W-BQ6Q5X2 51 aa-4.43□□□□□ -3.12
Retrieved 63 of 5,963 RNA–protein pairs in 197.9 ms