RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 TTI2Q6NXR4 508 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 C1orf186Q6ZWK4 172 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 APBB1IPQ7Z5R6 666 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 PHTF2Q8N3S3 785 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 TTC16Q8NEE8 873 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 IFT74Q96LB3 600 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 MED15Q96RN5 788 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 THAP9Q9H5L6 903 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 FANCLQ9NW38 375 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 PTPN13Q12923 2485 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 A0A0A0MRY4 1105 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 C2orf78A6NCI8 922 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 LACTBL1A8MY62 500 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 TLX3O43711 291 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 FAM189A1O60320 539 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 ALDH1A2O94788 518 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 CYP17A1P05093 508 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 MAPTP10636 758 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 CYP3A5P20815 502 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 ABCG1P45844 678 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 GRIK2Q13002 908 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 ALCAMQ13740 583 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 CCDC142Q17RM4 750 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 STXBP4Q6ZWJ1 553 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 ARL14EPQ8N8R7 260 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 KIFAP3Q92845 792 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 TSG101Q99816 390 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 TCHPQ9BT92 498 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 RUSC1Q9BVN2 902 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 PARVGQ9HBI0 331 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 CALCOCO1Q9P1Z2 691 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 IMPACTQ9P2X3 320 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 PCDHB9Q9Y5E1 797 aa12.71□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 COL12A1Q99715 3063 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 CCDC169A6NNP5 214 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 FAM13AO94988 1023 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 SERPINC1P01008 464 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 ADRB2P07550 413 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 TCF3P15923 654 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 SCP2P22307 547 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 MCL1Q07820 350 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 NOLC1Q14978 699 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 DBX2Q6ZNG2 339 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 EPM2AIP1Q7L775 607 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 MIB1Q86YT6 1006 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 LSM14AQ8ND56 463 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 EXOC4Q96A65 974 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 DRC1Q96MC2 740 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 HSPA12BQ96MM6 686 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 PLEKHA5Q9HAU0 1116 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 UBQLN1Q9UMX0 589 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 MAGED2Q9UNF1 606 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 CEP192Q8TEP8 1941 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 ANK1P16157 1881 aa12.7□□□□□ -0.38
VPS9D1-207ENST00000568691 MUC22E2RYF6 1773 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 A0A1B0GTH6 734 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 A0A1W2PQF6 199 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 PIRO00625 290 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 SLC16A4O15374 487 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 TOM1L1O75674 476 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 NOL4O94818 638 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 KAT7O95251 611 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 PTMAP06454 111 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 SYPP08247 313 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ODC1P11926 461 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 MAOBP27338 520 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ABCD1P33897 745 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 UBASH3AP57075 661 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 GSDMDP57764 484 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ENOX2Q16206 610 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 DDR2Q16832 855 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 PLEKHG6Q3KR16 790 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 LMBRD2Q68DH5 695 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 SFR1Q86XK3 245 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ZC3H3Q8IXZ2 948 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ADGRG2Q8IZP9 1017 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 CCDC26Q8TAB7 109 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 SPPL2BQ8TCT7 592 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 MYRFLQ96LU7 910 aa12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 XPO4Q9C0E2 1151 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-207ENST00000568691 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms