RNA–Protein interactions for RNA: ENST00000559659.1

NUSAP1-209, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 2

Gene NUSAP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-209ENST00000559659 RTP3Q9BQQ7 232 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 ZNF670Q9BS34 389 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 DDX23Q9BUQ8 820 aaKnown RBP8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 ULBP1Q9BZM6 244 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 VIPAS39Q9H9C1 493 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 PRDM16Q9HAZ2 1276 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 KLHL11Q9NVR0 708 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 RCOR3Q9P2K3 495 aaPredicted RBP8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 DNAJB4Q9UDY4 337 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 MTRF1LQ9UGC7 380 aaKnown RBP8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 DNAH12Q6ZR08 3092 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 PCNTO95613 3336 aa8.48□□□□□ -1.05
NUSAP1-209ENST00000559659 GREB1Q4ZG55 1949 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 BHMG1C9JSJ3 638 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 PI4K2BG5E9Z4 385 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 NRP1O14786 923 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 KIAA0355O15063 1070 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 MCF2LO15068 1137 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 B4GALT3O60512 393 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ZMYND10O75800 440 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 SEC31AO94979 1220 aaKnown RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ZBED1O96006 694 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 TIMP1P01033 207 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 LTFP02788 710 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ALDH2P05091 517 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 TCF4P15884 667 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 RAG1P15918 1043 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ZFXP17010 805 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 FGFR3P22607 806 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 BDNFP23560 247 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 KDELR1P24390 212 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 IL1R2P27930 398 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 MAGEA11P43364 429 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 SLC11A1P49279 550 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ZNF135P52742 658 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 LBX1P52954 281 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 DRG2P55039 364 aaKnown RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CDH6P55285 790 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 HDAC4P56524 1084 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 YWHAZP63104 245 aaKnown RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 KRT17Q04695 432 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CALCOCO2Q13137 446 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 PTK6Q13882 451 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CASP8Q14790 479 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 TAZQ16635 292 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CCDC142Q17RM4 750 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 C15orf59Q2T9L4 293 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CTXN3Q4LDR2 81 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 FAM171A1Q5VUB5 890 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 KAZNQ674X7 775 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CEP128Q6ZU80 1094 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ZNF365Q70YC5 407 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 BEND5Q7L4P6 421 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 RFX6Q8HWS3 928 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ARHGAP18Q8N392 663 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 TMEM199Q8N511 208 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 GOLGA6L1Q8N7Z2 621 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CCDC89Q8N998 374 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 BBOF1Q8ND07 529 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CMASQ8NFW8 434 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ATL2Q8NHH9 583 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 SPPL2BQ8TCT7 592 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 HDAC7Q8WUI4 952 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CASKIN2Q8WXE0 1202 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 IFT81Q8WYA0 676 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 RAPGEF5Q92565 580 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 HSPH1Q92598 858 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CENPIQ92674 756 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 LRRC45Q96CN5 670 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 PAWRQ96IZ0 340 aaKnown RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 RUFY1Q96T51 708 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 SLC9A7Q96T83 725 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 FMO2Q99518 471 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ERP44Q9BS26 406 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 TRIM51Q9BSJ1 452 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 C11orf84Q9BUA3 381 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 SNRNP25Q9BV90 132 aaKnown RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 CALN1Q9BXU9 219 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 MAK16Q9BXY0 300 aaKnown RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 PRDM5Q9NQX1 630 aaPredicted RBP8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 MARCH5Q9NX47 278 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 STK39Q9UEW8 545 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ASIC3Q9UHC3 531 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 PCSK1NQ9UHG2 260 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 PCDHB5Q9Y5E4 795 aa8.47□□□□□ -1.05
NUSAP1-209ENST00000559659 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
NUSAP1-209ENST00000559659 COL4A6Q14031 1691 aa8.46□□□□□ -1.05
NUSAP1-209ENST00000559659 TCRBV7S2A1N4TA0A589 114 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 ESYT3A0FGR9 886 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 C3orf70A6NLC5 250 aaPredicted RBP8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 HHLA1C9JL84 531 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 APOC4-APOC2K7ER74 178 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 LIASO43766 372 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 BEST1O76090 585 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 F9P00740 461 aa8.46□□□□□ -1.06
NUSAP1-209ENST00000559659 APOC2P02655 101 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms