RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 EIF2AQ9BY44 585 aaKnown RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 CDT1Q9H211 546 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 TMEM8AQ9HCN3 771 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 CPSF3Q9UKF6 684 aaKnown RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 PRKCBP05771 671 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 HOXD8P13378 290 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 CREB1P16220 341 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 HALP42357 657 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 SLC34A1Q06495 639 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 PSMD6Q15008 389 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 INAQ16352 499 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 C1orf146Q5VVC0 180 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 TMC3Q7Z5M5 1100 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 DCUN1D5Q9BTE7 237 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 PDZD7Q9H5P4 517 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 ARMC7Q9H6L4 198 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 C17orf75Q9HAS0 396 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 ASIC3Q9UHC3 531 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 PDCD11Q14690 1871 aaKnown RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 HTR3EA5X5Y0 456 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 POC1B-GALNT4F8VUJ3 575 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 GPR32O75388 356 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 GARTP22102 1010 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 CDH8P55286 799 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 MYL6P60660 151 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 ADAM17P78536 824 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 IL9RQ01113 521 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 DSG1Q02413 1049 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 OVGP1Q12889 678 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 MYBPC2Q14324 1141 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 TAF1BQ53T94 588 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 KRT39Q6A163 491 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 PASD1Q8IV76 773 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 USP33Q8TEY7 942 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 RUBCNQ92622 972 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 OXCT2Q9BYC2 517 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-216ENST00000534765 XYLT2Q9H1B5 865 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 SEMA4AQ9H3S1 761 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 SYNCQ9H7C4 482 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 GINS2Q9Y248 185 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 STXBP5LQ9Y2K9 1186 aa9.41□□□□□ -0.9
SF3B2-216ENST00000534765 INO80B-WBP1J3KQ70 363 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 GH1P01241 217 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 TCF4P15884 667 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 PGM1P36871 562 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 EPHB1P54762 984 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 PTENP60484 403 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 FKBP1BP68106 108 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 DR1Q01658 176 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 GRIK4Q16099 956 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 ZNF394Q53GI3 561 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 OR6J1Q8NGC5 347 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 SLC35G2Q8TBE7 412 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-216ENST00000534765 PARK7Q99497 189 aaKnown RBP9.4□□□□□ -0.9
SF3B2-216ENST00000534765 INO80BQ9C086 356 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-216ENST00000534765 ERAP1Q9NZ08 941 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 RNF14Q9UBS8 474 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 APPL1Q9UKG1 709 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 DSEQ9UL01 958 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 ASB14A6NK59 587 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 SRRM3A6NNA2 597 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-216ENST00000534765 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.9
SF3B2-216ENST00000534765 MCF2LO15068 1137 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 CYP11B1P15538 503 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 NEK2P51955 445 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 MEI1Q5TIA1 1274 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 FAAH2Q6GMR7 532 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 DSTYKQ6XUX3 929 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 GALNT4Q8N4A0 578 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 FBXL13Q8NEE6 735 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 TPCN2Q8NHX9 752 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 ALG3Q92685 438 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 KRT35Q92764 455 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 CCT7Q99832 543 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 RNF39Q9H2S5 420 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 ADAMTS10Q9H324 1103 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 NRBP2Q9NSY0 501 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 CYTH4Q9UIA0 394 aa9.4□□□□□ -0.9
SF3B2-216ENST00000534765 ARIH1Q9Y4X5 557 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-216ENST00000534765 TCRBV7S2A1N4TA0A589 114 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 E7ENQ6 273 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 EIF3FO00303 357 aaPredicted RBP9.4□□□□□ -0.91
SF3B2-216ENST00000534765 PGK1P00558 417 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 MX2P20592 715 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 TMEM132AQ24JP5 1023 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 FAM160B1Q5W0V3 765 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 PIGWQ7Z7B1 504 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 ABRAQ8N0Z2 381 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 MREGQ8N565 214 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 TRIML2Q8N7C3 387 aa9.4□□□□□ -0.91
SF3B2-216ENST00000534765 ZNF317Q96PQ6 595 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms