RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 TRAK2O60296 914 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 GJB6O95452 261 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 FAM87AP0C7U9 286 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 GCFC2P16383 781 aaKnown RBP9.6□□□□□ -0.87
PACS1-213ENST00000533756 PROZP22891 400 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 CD27P26842 260 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 RBMS1P29558 406 aaKnown RBP9.6□□□□□ -0.87
PACS1-213ENST00000533756 GPR15P49685 360 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 CDR1P51861 262 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 STARD3Q14849 445 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 NOLC1Q14978 699 aaKnown RBP eCLIP9.6□□□□□ -0.87
PACS1-213ENST00000533756 NFE2Q16621 373 aaPredicted RBP9.6□□□□□ -0.87
PACS1-213ENST00000533756 ZSCAN23Q3MJ62 389 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 KCNT1Q5JUK3 1230 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 CDCP2Q5VXM1 449 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 ADAT2Q7Z6V5 191 aaKnown RBP9.6□□□□□ -0.87
PACS1-213ENST00000533756 METTL23Q86XA0 190 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SLFN12Q8IYM2 578 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 NAT16Q8N8M0 369 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 PIGOQ8TEQ8 1089 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SNX19Q92543 992 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SKA1Q96BD8 255 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 ERLEC1Q96DZ1 483 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SGF29Q96ES7 293 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SIPA1Q96FS4 1042 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 SLC46A1Q96NT5 459 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 DEPDC7Q96QD5 511 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 TCHPQ9BT92 498 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 GEMIN8Q9NWZ8 242 aaKnown RBP9.6□□□□□ -0.87
PACS1-213ENST00000533756 VPS54Q9P1Q0 977 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 RCAN3Q9UKA8 241 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 PCDHA4Q9UN74 947 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 FBN3Q75N90 2809 aa9.6□□□□□ -0.87
PACS1-213ENST00000533756 MYO18AQ92614 2054 aaKnown RBP9.6□□□□□ -0.87
PACS1-213ENST00000533756 ZFHX3Q15911 3703 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 VILLO15195 856 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 EFSO43281 561 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 XPOTO43592 962 aaKnown RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 BAG4O95429 457 aaKnown RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 GRIK1P39086 918 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 CASRP41180 1078 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 C21orf59P57076 290 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 HNRNPUQ00839 825 aaKnown RBP eCLIP9.59□□□□□ -0.87
PACS1-213ENST00000533756 CLN3Q13286 438 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 SAFBQ15424 915 aaKnown RBP eCLIP9.59□□□□□ -0.87
PACS1-213ENST00000533756 SHBQ15464 509 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 DDR2Q16832 855 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 FUT11Q495W5 492 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 SDHAF4Q5VUM1 108 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 MPZL3Q6UWV2 235 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 DDX42Q86XP3 938 aaKnown RBP eCLIP9.59□□□□□ -0.87
PACS1-213ENST00000533756 TMPRSS6Q8IU80 811 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 NSUN7Q8NE18 718 aaKnown RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 STKLD1Q8NE28 680 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 ZNF564Q8TBZ8 553 aaPredicted RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 PRCCQ92733 491 aaPredicted RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 IFT74Q96LB3 600 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 TSPAN18Q96SJ8 248 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 KIFC3Q9BVG8 833 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 RNF26Q9BY78 433 aaPredicted RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 MRPL4Q9BYD3 311 aaKnown RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 ACE2Q9BYF1 805 aaPredicted RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 MKRN2Q9H000 416 aaKnown RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 ABCB6Q9NP58 842 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 TMPRSS4Q9NRS4 437 aa9.59□□□□□ -0.87
PACS1-213ENST00000533756 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
PACS1-213ENST00000533756 CACNA1DQ01668 2161 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 KLF18A0A0U1RQI7 1052 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 WASH3PC4AMC7 463 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 ABLIM1O14639 778 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 SGSM2O43147 1006 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 OLFM2O95897 454 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 ACADMP11310 421 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 CYP11B2P19099 503 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 RACK1P63244 317 aaKnown RBP9.58□□□□□ -0.88
PACS1-213ENST00000533756 DSG2Q14126 1118 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 SKIDA1Q1XH10 827 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 PRAMEF14Q5SWL7 426 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 GRAMD4Q6IC98 578 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 PLPP6Q8IY26 295 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 BLIDQ8IZY5 108 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 LEO1Q8WVC0 666 aaPredicted RBP9.58□□□□□ -0.88
PACS1-213ENST00000533756 NAP1L4Q99733 375 aaKnown RBP9.58□□□□□ -0.88
PACS1-213ENST00000533756 SLC4A5Q9BY07 1137 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 RNF38Q9H0F5 515 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 C6orf106Q9H6K1 298 aaPredicted RBP9.58□□□□□ -0.88
PACS1-213ENST00000533756 CFAP97Q9P2B7 532 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 ANAPC2Q9UJX6 822 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 CPQQ9Y646 472 aa9.58□□□□□ -0.88
PACS1-213ENST00000533756 TLN1Q9Y490 2541 aaKnown RBP9.57□□□□□ -0.88
PACS1-213ENST00000533756 A0A087WWV3 80 aa9.57□□□□□ -0.88
PACS1-213ENST00000533756 PRRT4C9JH25 899 aa9.57□□□□□ -0.88
PACS1-213ENST00000533756 NPC1O15118 1278 aa9.57□□□□□ -0.88
PACS1-213ENST00000533756 TRIM24O15164 1050 aa9.57□□□□□ -0.88
PACS1-213ENST00000533756 TSPAN3O60637 253 aa9.57□□□□□ -0.88
PACS1-213ENST00000533756 NUDT7P0C024 238 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms