RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SLC39A12Q504Y0 691 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 ZC2HC1CQ53FD0 456 aaPredicted RBP7.55□□□□□ -1.2
VCAN-206ENST00000505615 PIK3AP1Q6ZUJ8 805 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 USP37Q86T82 979 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 LRRTM3Q86VH5 581 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 C12orf40Q86WS4 652 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 GALNT15Q8N3T1 639 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 TRIML1Q8N9V2 468 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 MRPS31Q92665 395 aaKnown RBP7.55□□□□□ -1.2
VCAN-206ENST00000505615 ZBTB45Q96K62 511 aaPredicted RBP7.55□□□□□ -1.2
VCAN-206ENST00000505615 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 PI4K2AQ9BTU6 479 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 TARS2Q9BW92 718 aaKnown RBP7.55□□□□□ -1.2
VCAN-206ENST00000505615 SEMA4CQ9C0C4 833 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 IL21RQ9HBE5 538 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 GCNT4Q9P109 453 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 CALCOCO1Q9P1Z2 691 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 BTBD3Q9Y2F9 522 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 FNDC3AQ9Y2H6 1198 aaKnown RBP7.55□□□□□ -1.2
VCAN-206ENST00000505615 BSNQ9UPA5 3926 aa7.55□□□□□ -1.2
VCAN-206ENST00000505615 CAPN8A6NHC0 703 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 PLK4O00444 970 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 BAG4O95429 457 aaKnown RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 CYP17A1P05093 508 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 CYP11A1P05108 521 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 ZNF883P0CG24 379 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 CXCL8P10145 99 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 HARSP12081 509 aaKnown RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 SLC6A11P48066 632 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 ZXDBP98169 803 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 SPAG1Q07617 926 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 SSRP1Q08945 709 aaKnown RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 KRT32Q14532 448 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 SEZ6Q53EL9 994 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 EOGTQ5NDL2 527 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 MPZL3Q6UWV2 235 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 DSTYKQ6XUX3 929 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 DBX2Q6ZNG2 339 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.22e-6■■■■■ 27.7
VCAN-206ENST00000505615 GPR155Q7Z3F1 870 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 CATSPER3Q86XQ3 398 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 PHTF2Q8N3S3 785 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 SH3RF2Q8TEC5 729 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 KCNB2Q92953 911 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 ZNF419Q96HQ0 510 aaPredicted RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 SENP8Q96LD8 212 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 CYP2S1Q96SQ9 504 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 NAP1L4Q99733 375 aaKnown RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 MRPL4Q9BYD3 311 aaKnown RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 TTC12Q9H892 705 aaPredicted RBP7.54□□□□□ -1.2
VCAN-206ENST00000505615 PRDM16Q9HAZ2 1276 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 CD248Q9HCU0 757 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 CD93Q9NPY3 652 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 ARHGAP28Q9P2N2 729 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 PCDHA12Q9UN75 941 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 CKAP5Q14008 2032 aa7.54□□□□□ -1.2
VCAN-206ENST00000505615 STK36Q9NRP7 1315 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 A0A0A0MRY4 1105 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 TTC26A0AVF1 554 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 ARHGEF35A5YM69 484 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 K7ERI5 159 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CILPO75339 1184 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 KAT7O95251 611 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 WISP1O95388 367 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 NFATC1O95644 943 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 STAU1O95793 577 aaKnown RBP7.53□□□□□ -1.2
VCAN-206ENST00000505615 HLA-EP13747 358 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CYP3A5P20815 502 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 LILRA4P59901 499 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 MYO1EQ12965 1108 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 NOLC1Q14978 699 aaKnown RBP eCLIP7.53□□□□□ -1.2
VCAN-206ENST00000505615 TAF12Q16514 161 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CALCRLQ16602 461 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 SDHAF4Q5VUM1 108 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 ARMCX5Q6P1M9 558 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 FIGNL1Q6PIW4 674 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CHSY3Q70JA7 882 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 DAW1Q8N136 415 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 ARL14EPQ8N8R7 260 aaPredicted RBP7.53□□□□□ -1.2
VCAN-206ENST00000505615 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 TTC16Q8NEE8 873 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 SPPL2BQ8TCT7 592 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 LRRC15Q8TF66 581 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 SETD7Q8WTS6 366 aaKnown RBP7.53□□□□□ -1.2
VCAN-206ENST00000505615 TNFRSF25Q93038 417 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CALR3Q96L12 384 aaKnown RBP7.53□□□□□ -1.2
VCAN-206ENST00000505615 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 MTMR9Q96QG7 549 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CDC6Q99741 560 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 FAM124BQ9H5Z6 455 aaPredicted RBP7.53□□□□□ -1.2
VCAN-206ENST00000505615 TUFT1Q9NNX1 390 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 GJB4Q9NTQ9 266 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 ARHGAP26Q9UNA1 814 aa7.53□□□□□ -1.2
VCAN-206ENST00000505615 CYP8B1Q9UNU6 501 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms