RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CSNK1G1Q9HCP0 422 aa9.98□□□□□ -0.81
APOBEC1-202ENST00000467171 WHRNQ9P202 907 aa9.98□□□□□ -0.81
APOBEC1-202ENST00000467171 R3HDM2Q9Y2K5 976 aaKnown RBP9.98□□□□□ -0.81
APOBEC1-202ENST00000467171 NEU2Q9Y3R4 380 aa9.98□□□□□ -0.81
APOBEC1-202ENST00000467171 MYBPHLA2RUH7 354 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 PI4K2BG5E9Z4 385 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 HOXA2O43364 376 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 LIASO43766 372 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 PRPSAP2O60256 369 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 DAB1O75553 588 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 CXCL10P02778 98 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM153BP0C7A2 387 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 CCL5P13501 91 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 ITIH2P19823 946 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 GJC1P36383 396 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 KCNJ1P48048 391 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 MTMR3Q13615 1198 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 TAF5Q15542 800 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM153CQ494X1 144 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 ZDHHC24Q6UX98 284 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 STRADAQ7RTN6 431 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 BNIPLQ7Z465 357 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 PSTKQ8IV42 348 aaKnown RBP9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 MAP7D3Q8IWC1 876 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 COLGALT2Q8IYK4 626 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 IQCKQ8N0W5 287 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 THEM5Q8N1Q8 247 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 CCDC89Q8N998 374 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 KCTD6Q8NC69 237 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 BBOF1Q8ND07 529 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 DBF4BQ8NFT6 615 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC35B2Q8TB61 432 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 NT5C3BQ969T7 300 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 SMARCD1Q96GM5 515 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 PCED1BQ96HM7 432 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 SLC2A13Q96QE2 648 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 FMO2Q99518 471 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 NEUROG2Q9H2A3 272 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 PLEKHA4Q9H4M7 779 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 ZWILCHQ9H900 591 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 LRRC4Q9HBW1 653 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 PNPLA8Q9NP80 782 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 CNGB3Q9NQW8 809 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 GRHL1Q9NZI5 618 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 CACNG4Q9UBN1 327 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 FAM153AQ9UHL3 310 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 SCN1AP35498 2009 aa9.97□□□□□ -0.81
APOBEC1-202ENST00000467171 GOLGA6BA6NDN3 693 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 AGPSO00116 658 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 PIK3R2O00459 728 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 CLDN5O00501 218 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 NDC80O14777 642 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 SYN3O14994 580 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 GPR37O15354 613 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 TRAPPC3O43617 180 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 PPFIA2O75334 1257 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 GRAP2O75791 330 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 AP1G2O75843 785 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 BEST1O76090 585 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 OAZ2O95190 189 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 ITGAVP06756 1048 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 KRT10P13645 584 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 LCP1P13796 627 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 IVDP26440 423 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 NOS2P35228 1153 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 MATKP42679 507 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 BRCC3P46736 316 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 VCPP55072 806 aaKnown RBP9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 HDAC4P56524 1084 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 CAV1Q03135 178 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 KRT17Q04695 432 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 ADCY2Q08462 1091 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 BYSLQ13895 437 aaKnown RBP9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 TFDP2Q14188 446 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 MTFR1Q15390 333 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 PPP1R7Q15435 360 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 SLC25A52Q3SY17 297 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 HSP90B2PQ58FF3 399 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 KCNT1Q5JUK3 1230 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 ZFYVE27Q5T4F4 411 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 LRIG3Q6UXM1 1119 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 BEND5Q7L4P6 421 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 DDX42Q86XP3 938 aaKnown RBP eCLIP9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 SIX6OS1Q8N1H7 587 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 TSEN2Q8NCE0 465 aaKnown RBP9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 FAM172AQ8WUF8 416 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 ATG4AQ8WYN0 398 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 IRGQQ8WZA9 623 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 ART4Q93070 314 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 MYLPFQ96A32 169 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 CFAP57Q96MR6 1250 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 GDAP1L1Q96MZ0 367 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 PEBP4Q96S96 227 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 SMOQ99835 787 aa9.96□□□□□ -0.82
APOBEC1-202ENST00000467171 SH3GL2Q99962 352 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms