RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 ICAM1P05362 532 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 ATP5BP06576 529 aaKnown RBP17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 FDFT1P37268 417 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 NPTX2P47972 431 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 OGDHQ02218 1023 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 ENPEPQ07075 957 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 UGCGQ16739 394 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 WDR44Q5JSH3 913 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 SLC39A4Q6P5W5 647 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 PGM2L1Q6PCE3 622 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 TMEM270Q6UE05 265 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 CTAGE3PQ8IX95 158 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 ZFP28Q8NHY6 868 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 TMEM165Q9HC07 324 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 PCDHB4Q9Y5E5 795 aa17.84■□□□□ 0.45
SCUBE2-202ENST00000450649 CASQ2O14958 399 aaPredicted RBP17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 ACO1P21399 889 aaKnown RBP17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 MTMR1Q13613 665 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 ZYXQ15942 572 aaKnown RBP17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 DENND5BQ6ZUT9 1274 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 SLC26A11Q86WA9 606 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 UNC45BQ8IWX7 931 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 PPM1NQ8N819 430 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 IRGQQ8WZA9 623 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 GRIP2Q9C0E4 1043 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 RBM38Q9H0Z9 239 aaKnown RBP17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 CYP4F11Q9HBI6 524 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 ANKEF1Q9NU02 776 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 CCPG1Q9ULG6 757 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 AGTPBP1Q9UPW5 1226 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 INPP5FQ9Y2H2 1132 aa17.83■□□□□ 0.45
SCUBE2-202ENST00000450649 TTLL13PA6NNM8 815 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 STRNO43815 780 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 PEX1O43933 1283 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 SNNO75324 88 aaPredicted RBP17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 PROCP04070 461 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 PMLP29590 882 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 MRPS9P82933 396 aaKnown RBP17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 TMED1Q13445 227 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 SNAPC2Q13487 334 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 SYCP2LQ5T4T6 812 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 PLA2G4FQ68DD2 849 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 ZCCHC23Q6ZST2 131 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 MARVELD2Q8N4S9 558 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 UBAP1Q9NZ09 502 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 CDH22Q9UJ99 828 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 POMPQ9Y244 141 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 SSX2IPQ9Y2D8 614 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 DTNAQ9Y4J8 743 aa17.83■□□□□ 0.44
SCUBE2-202ENST00000450649 GALK1P51570 392 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 COPAP53621 1224 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 IRX4P78413 519 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 SULT2A1Q06520 285 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 WASHC5Q12768 1159 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 DMP1Q13316 513 aaPredicted RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 DUS1LQ6P1R4 473 aaKnown RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 GAB3Q8WWW8 586 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 DDX56Q9NY93 547 aaKnown RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 TMOD2Q9NZR1 351 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 PCDHGB4Q9UN71 923 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 PCDHGB5Q9Y5G0 923 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 COL11A2P13942 1736 aaPredicted RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 TCP10L2B9ZVM9 353 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 CST8O60676 142 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 CSDE1O75534 798 aaKnown RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 SNRPAP09012 282 aaKnown RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 ATP6V1B1P15313 513 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 PTGER2P43116 358 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 NRLP54845 237 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 GHRHRQ02643 423 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 MYLK3Q32MK0 819 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 TCHHL1Q5QJ38 904 aaPredicted RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 DCUN1D2Q6PH85 259 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 EFCAB3Q8N7B9 438 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 JDP2Q8WYK2 163 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 FAM213AQ9BRX8 229 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 NTPCRQ9BSD7 190 aaKnown RBP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 SHCBP1LQ9BZQ2 653 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 TIMMDC1Q9NPL8 285 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 TEX264Q9Y6I9 313 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 H3BNX3 289 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 NFIBO00712 420 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 KRT37O76014 449 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 HLA-DRAP01903 254 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 HNRNPCP07910 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 YY1P25490 414 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 EMP3P54852 163 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 HPS6Q86YV9 775 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 MAP7D3Q8IWC1 876 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 FAM71DQ8N9W8 422 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 ACTRT2Q8TDY3 377 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 CLEC4DQ8WXI8 215 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 APOL6Q9BWW8 343 aa17.82■□□□□ 0.44
SCUBE2-202ENST00000450649 SF3B1O75533 1304 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCUBE2-202ENST00000450649 KAT6AQ92794 2004 aa17.81■□□□□ 0.44
SCUBE2-202ENST00000450649 A0A0B4J269 797 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms