RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 KXD1Q9BQD3 176 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 FAM126AQ9BYI3 521 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-204ENST00000405578 SEMA4GQ9NTN9 838 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 TSPAN16Q9UKR8 245 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 CDH7Q9ULB5 785 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 LUC7L2Q9Y383 392 aaKnown RBP11.14□□□□□ -0.63
RPAIN-204ENST00000405578 IGF2RP11717 2491 aa11.14□□□□□ -0.63
RPAIN-204ENST00000405578 A0A1W2PQJ5 194 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 GOLGA6L6A8MZA4 724 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 F8VP50 259 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 RNF225M0QZC1 329 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 O00370 1275 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 CLDN5O00501 218 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 EPHB6O15197 1021 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 NCAM2O15394 837 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 CCL16O15467 120 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 GFPT2O94808 682 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 RETP07949 1114 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 TDGF1P13385 188 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 PTPN2P17706 415 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 BRD2P25440 801 aaKnown RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 PBX1P40424 430 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 RPS9P46781 194 aaKnown RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 CDR1P51861 262 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 JAM2P57087 298 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 SNX16P57768 344 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 SHC2P98077 582 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 MTAPQ13126 283 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 DDR2Q16832 855 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 N4BP2L1Q5TBK1 243 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 SFMBT2Q5VUG0 894 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 LCLAT1Q6UWP7 414 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 DENND5BQ6ZUT9 1274 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 GRASPQ7Z6J2 395 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 ZNF677Q86XU0 584 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 DRC7Q8IY82 874 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 DDX1Q92499 740 aaKnown RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 PSMG2Q969U7 264 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 MRFAP1L1Q96HT8 127 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 SPATA17Q96L03 361 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 NOX5Q96PH1 765 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 LPIN3Q9BQK8 851 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 DUSP16Q9BY84 665 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 PNPLA8Q9NP80 782 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 ASAH2Q9NR71 780 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 ZNHIT6Q9NWK9 470 aaKnown RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-204ENST00000405578 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
RPAIN-204ENST00000405578 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 VWA8A3KMH1 1905 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 M0QYV0 167 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ZNF197O14709 1029 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 SOAT2O75908 522 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 VNN2O95498 520 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 PROS1P07225 676 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CYP11B1P15538 503 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ZNF75DP51815 510 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ZBED6P86452 979 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ARID5AQ03989 594 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 BST2Q10589 180 aaKnown RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ASIC2Q16515 512 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CSRP2Q16527 193 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 IL31Q6EBC2 164 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 PDZD4Q76G19 769 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 DNAJB7Q7Z6W7 309 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 SLC47A2Q86VL8 602 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CELF5Q8N6W0 485 aaKnown RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 GIPC2Q8TF65 315 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ZNF606Q8WXB4 792 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 SYN2Q92777 582 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 FGF13Q92913 245 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 NELL2Q99435 816 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CORO1BQ9BR76 489 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 UBXN6Q9BZV1 441 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 GPR88Q9GZN0 384 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CRISPLD1Q9H336 500 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CSNK1G1Q9HCP0 422 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 COMMD8Q9NX08 183 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 AJAP1Q9UKB5 411 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 CAPN11Q9UMQ6 739 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 BZW2Q9Y6E2 419 aaKnown RBP11.12□□□□□ -0.63
RPAIN-204ENST00000405578 SCN1AP35498 2009 aa11.12□□□□□ -0.63
RPAIN-204ENST00000405578 SPEGQ15772 3267 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 LRRC53A6NM62 1247 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 XPO1O14980 1071 aaKnown RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 MICAL2O94851 1124 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 PNMA6AP0CW24 399 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-204ENST00000405578 ATF6P18850 670 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 CLCN1P35523 988 aa11.11□□□□□ -0.63
RPAIN-204ENST00000405578 NRLP54845 237 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms