RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 VCPP55072 806 aaKnown RBP16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 IL9RQ01113 521 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SF3A3Q12874 501 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MORF4L2Q15014 288 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 KAZNQ674X7 775 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NIPA2Q8N8Q9 360 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 GDAP1Q8TB36 358 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NKD2Q969F2 451 aaPredicted RBP16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SNX27Q96L92 541 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TSPAN18Q96SJ8 248 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LBHD1Q9BQE6 289 aaPredicted RBP16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 APOL6Q9BWW8 343 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 NIF3L1Q9GZT8 377 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 KLHL11Q9NVR0 708 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TBK1Q9UHD2 729 aa16.65■□□□□ 0.26
CHRFAM7A-203ENST00000401522 EXOC1LA0A1B0GW35 172 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 FAM47DPA6NHR8 397 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 RASA4BC9J798 803 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 RASA4O43374 803 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 FGBP02675 491 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 KRT10P13645 584 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CDH5P33151 784 aaPredicted RBP16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 ARSEP51690 589 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 SLC18A1P54219 525 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 ZNF252P-AS1Q0IIN9 211 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 RIPK1Q13546 671 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 TMED2Q15363 201 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 WLSQ5T9L3 541 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 DCUN1D2Q6PH85 259 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 LPPQ93052 612 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MCEEQ96PE7 176 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 CNTN3Q9P232 1028 aa16.64■□□□□ 0.26
CHRFAM7A-203ENST00000401522 MICAL3Q7RTP6 2002 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 hCG_1818297A0A087WSY0 165 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FOXO6A8MYZ6 492 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ITGAVP06756 1048 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GPS1Q13098 491 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SGSM1Q2NKQ1 1148 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ATP13A4Q4VNC1 1196 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TFDP3Q5H9I0 405 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PPP1R15BQ5SWA1 713 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NT5DC4Q86YG4 428 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RSAD1Q9HA92 442 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 MLXIPLQ9NP71 852 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SENP1Q9P0U3 644 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PCDHGC3Q9UN70 934 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SHOC2Q9UQ13 582 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 DERAQ9Y315 318 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CEP83Q9Y592 693 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PCDHB7Q9Y5E2 793 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TTC3P53804 2025 aa16.64■□□□□ 0.25
CHRFAM7A-203ENST00000401522 INPPL1O15357 1258 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ATP6V1G2O95670 118 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KCNE1P15382 129 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TCF4P15884 667 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 BRD2P25440 801 aaKnown RBP16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NCALDP61601 193 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 BNIP1Q12981 228 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RNF43Q68DV7 783 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PSRC1Q6PGN9 363 aaPredicted RBP16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 POLNQ7Z5Q5 900 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PRUNE1Q86TP1 453 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TRABD2AQ86V40 505 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RNF169Q8NCN4 708 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GSTCDQ8NEC7 633 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 FRMD8P1Q9BZ68 369 aaPredicted RBP16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CXCL16Q9H2A7 254 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ECT2Q9H8V3 914 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RXFP1Q9HBX9 757 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PCDH9Q9HC56 1237 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CISHQ9NSE2 258 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 KLK14Q9P0G3 267 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 STRIP2Q9ULQ0 834 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 C2CD2Q9Y426 696 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CITO14578 2027 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ANK1P16157 1881 aa16.63■□□□□ 0.25
CHRFAM7A-203ENST00000401522 SMIM28A0A1B0GU29 152 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ARL5CA6NH57 179 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 F8VP50 259 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PRPF4O43172 522 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 PECAM1P16284 738 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TAC1P20366 129 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CDKN2BP42772 138 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RGS19P49795 217 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 GSCP56915 257 aaPredicted RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 YWHAEP62258 255 aaKnown RBP16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 RASA2Q15283 850 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZBTB6Q15916 424 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 DUOXA2Q1HG44 320 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 CENPUQ71F23 418 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 OTOP2Q7RTS6 562 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 NPAS4Q8IUM7 802 aa16.62■□□□□ 0.25
CHRFAM7A-203ENST00000401522 ZFP42Q96MM3 310 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms