RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MCL1Q07820 350 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 MTF1Q14872 753 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 FAM83EQ2M2I3 478 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 BHLHE41Q9C0J9 482 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 AASDHPPTQ9NRN7 309 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 TRPM5Q9NZQ8 1165 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SNX13Q9Y5W8 968 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CDK12Q9NYV4 1490 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 KRT33AO76009 404 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 RAPGEF3O95398 923 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SESN2P58004 480 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 ZNF284Q2VY69 593 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SEL1L3Q68CR1 1132 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 THOC7Q6I9Y2 204 aaKnown RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 SCFD2Q8WU76 684 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ECSITQ9BQ95 431 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 FKBP14Q9NWM8 211 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 COMMD8Q9NX08 183 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 GIN1Q9NXP7 522 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 GDF11O95390 407 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 LBPP18428 481 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SFNP31947 248 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ITGA8P53708 1063 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GALCP54803 685 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SPIRE1Q08AE8 756 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 TSNQ15631 228 aaKnown RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 PDCD4Q53EL6 469 aaKnown RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 BROXQ5VW32 411 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ZNF662Q6ZS27 426 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 FAM160B2Q86V87 743 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 EXOC3L1Q86VI1 746 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SPACA7Q96KW9 195 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 TRIM51Q9BSJ1 452 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 COPS7BQ9H9Q2 264 aaPredicted RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 C3orf70A6NLC5 250 aaPredicted RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 ZNF185O15231 689 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 DGKIO75912 1065 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GNA15P30679 374 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PCSK7Q16549 785 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 FAM98BQ52LJ0 330 aaKnown RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 C4orf33Q8N1A6 199 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 TBC1D22BQ9NU19 505 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PHF11Q9UIL8 331 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GTF3C4Q9UKN8 822 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 CLRN2A0PK11 232 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 CLOCKO15516 846 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ALDH5A1P51649 535 aaPredicted RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 SPIDRQ14159 915 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ZMYND11Q15326 602 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PTPN21Q16825 1174 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 DDR2Q16832 855 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PTRHD1Q6GMV3 140 aaKnown RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 MZT2AQ6P582 158 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 UGT2B28Q9BY64 529 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 NMRK1Q9NWW6 199 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 EIF4G3O43432 1585 aaKnown RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 BTN3A3O00478 584 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 AKR1D1P51857 326 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 BTBD8Q5XKL5 378 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 TRIM74Q86UV6 250 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 TRIM73Q86UV7 250 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GATAD2AQ86YP4 633 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GALNT15Q8N3T1 639 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 VTA1Q9NP79 307 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SLC35C2Q9NQQ7 365 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 MED14O60244 1454 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 TSHRP16473 764 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ACADLP28330 430 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD8-201ENST00000399982 RAB2AP61019 212 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 BLMHQ13867 455 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 NR1D2Q14995 579 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SLC15A2Q16348 729 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SLC13A5Q86YT5 568 aaPredicted RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 DHRSXQ8N5I4 330 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 AP3S1Q92572 193 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GANQ9H2C0 597 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 RAPGEFL1Q9UHV5 662 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 GGT7Q9UJ14 662 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SHOC2Q9UQ13 582 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 CCDC182A6NF36 153 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 CHP2O43745 196 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 HMBSP08397 361 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ME2P23368 584 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 MAPK9P45984 424 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ZNF699Q32M78 642 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 COLGALT2Q8IYK4 626 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 SFRP1Q8N474 314 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
CHD8-201ENST00000399982 AGAP3Q96P47 875 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 ASB2Q96Q27 587 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 THAP1Q9NVV9 213 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PTTG2Q9NZH5 202 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 COMMD9Q9P000 198 aa8.63□□□□□ -1.03
CHD8-201ENST00000399982 PCSK1NQ9UHG2 260 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms