RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CFAP73A6NFT4 308 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 PSMA3P25788 255 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TARSP26639 723 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 MARCKSL1P49006 195 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 DDR1Q08345 913 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 GJC2Q5T442 439 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 KHDRBS2Q5VWX1 349 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 ATG16L1Q676U5 607 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 LONP2Q86WA8 852 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 MTBPQ96DY7 904 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 SPDL1Q96EA4 605 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 FAM161BQ96MY7 647 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
CLCN6-202ENST00000346436 WDR41Q9HAD4 459 aa11.28□□□□□ -0.6
CLCN6-202ENST00000346436 SF3B1O75533 1304 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■■ 93.8
CLCN6-202ENST00000346436 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.6
CLCN6-202ENST00000346436 GJB6O95452 261 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 INSRRP14616 1297 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 GTF2H1P32780 548 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 RENBPP51606 427 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 PTENP60484 403 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 ACAD10Q6JQN1 1059 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 LNX1Q8TBB1 728 aaPredicted RBP11.27□□□□□ -0.6
CLCN6-202ENST00000346436 OSBPL1AQ9BXW6 950 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 RGPD1P0DJD0 1748 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 IFRD1O00458 451 aaPredicted RBP11.27□□□□□ -0.6
CLCN6-202ENST00000346436 HALP42357 657 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 EIF3EP60228 445 aaKnown RBP11.27□□□□□ -0.6
CLCN6-202ENST00000346436 PDK1Q15118 436 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 KCNT1Q5JUK3 1230 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 REPS2Q8NFH8 660 aa11.27□□□□□ -0.6
CLCN6-202ENST00000346436 SLC12A8A0AV02 714 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 HEATR9A2RTY3 570 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 UBXN8O00124 270 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 STX7O15400 261 aaKnown RBP11.27□□□□□ -0.61
CLCN6-202ENST00000346436 VTNP04004 478 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 SLC1A1P43005 524 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 RGS7P49802 495 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 HPCAP84074 193 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 TRIM15Q9C019 465 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 C11orf49Q9H6J7 331 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 NMRK1Q9NWW6 199 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 CTNNAL1Q9UBT7 734 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 VPS51Q9UID3 782 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 GTF3C4Q9UKN8 822 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 APOBEC3HQ6NTF7 200 aaKnown RBP11.27□□□□□ -0.61
CLCN6-202ENST00000346436 UGT3A1Q6NUS8 523 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 SLC27A1Q6PCB7 646 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 KIAA1324Q6UXG2 1013 aaKnown RBP11.27□□□□□ -0.61
CLCN6-202ENST00000346436 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 CERS5Q8N5B7 392 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 CCDC33Q8N5R6 958 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 C1orf131Q8NDD1 294 aaKnown RBP11.27□□□□□ -0.61
CLCN6-202ENST00000346436 SGSM3Q96HU1 749 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 ADAM2Q99965 735 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 ASTN1O14525 1302 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 UBOX5O94941 541 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 KRT20P35900 424 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 KDSRQ06136 332 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 KIF19Q2TAC6 998 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 CXCL17Q6UXB2 119 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 LRRC43Q8N309 656 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 SLC5A5Q92911 643 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 STX18Q9P2W9 335 aaKnown RBP11.27□□□□□ -0.61
CLCN6-202ENST00000346436 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.61
CLCN6-202ENST00000346436 GLUD1P00367 558 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 ITGB3P05106 788 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 ACO1P21399 889 aaKnown RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 NPTX2P47972 431 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 CPA2P48052 419 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 INPP1P49441 399 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 KLHL38Q2WGJ6 581 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 LVRNQ6Q4G3 990 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 MIB1Q86YT6 1006 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PDZD8Q8NEN9 1154 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 OMDQ99983 421 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PDCD2LQ9BRP1 358 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 ASPSCR1Q9BZE9 553 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 TRIM4Q9C037 500 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PSMD12O00232 456 aaPredicted RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 MCF2P10911 925 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PTPN3P26045 913 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 NCKAP1LP55160 1127 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 CAPRIN1Q14444 709 aaKnown RBP11.26□□□□□ -0.61
CLCN6-202ENST00000346436 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 ARSHQ5FYA8 562 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 HGSNATQ68CP4 663 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 CRLF3Q8IUI8 442 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 MCOLN3Q8TDD5 553 aa11.26□□□□□ -0.61
CLCN6-202ENST00000346436 PPP1R36Q96LQ0 422 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms