RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Pkd2l1A2A259 760 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Pgbd1E9Q492 415 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ccdc149F6V035 524 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Mroh4G3X8W1 983 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Hmx1O70218 332 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ap2a2P17427 938 aaKnown RBP9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Traf2P39429 501 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Alox12P39655 663 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 DbtP53395 482 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Tbc1d10aP58802 500 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 NfiaQ02780 532 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Lrrc47Q505F5 581 aaKnown RBP9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Cand2Q6ZQ73 1235 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Camta2Q80Y50 1208 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Klhl26Q8BGY4 606 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Frmd4aQ8BIE6 1020 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Senp7Q8BUH8 1037 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Zfp398Q8BV16 643 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Fmo2Q8K2I3 535 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Olfr693Q8VF89 316 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Snx9Q91VH2 595 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Uxs1Q91XL3 420 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Castor1Q9CWQ8 331 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 AenQ9CZI9 336 aaKnown RBP9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 MtrexQ9CZU3 1040 aaKnown RBP9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Bmp10Q9R229 421 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Synj2Q9D2G5 1434 aa9.38□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Pramel3A2AHA7 463 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Bpifb9bA2AJD1 591 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gm7903A2AWL1 463 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Fbrsl1E9Q9T0 1031 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Rgsl1H3BL40 1073 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gm20695H3BLK7 282 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gm15023L7MUB4 467 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 MrasO08989 208 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Slc16a8O35308 492 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Tph1P17532 447 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 CartptP56388 129 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ythdf1P59326 559 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Znf746Q3U133 652 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Vwa3aQ3UVV9 1148 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Bpifb9aQ80XI7 591 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Samd4aQ8CBY1 711 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gpc3Q8CFZ4 579 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Plekhg6Q8R0J1 787 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Stk33Q924X7 491 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Fam187aQ9D3R5 417 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Adarb2Q9JI20 745 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Osbpl7A2A716 963 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Dennd5bA2RSQ0 1274 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gm2244L7N2A3 218 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gas2P11862 314 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Defa8P50706 81 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Slc16a1P53986 493 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 RelaQ04207 549 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Atf4Q06507 349 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Tmem109Q3UBX0 243 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Nab1Q61122 486 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Epha7Q61772 998 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Rnf220Q6PDX6 566 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Syt16Q7TN83 639 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 ZfatQ7TS63 1237 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Suz12Q80U70 741 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Q80WR5 230 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Cops7bQ8BV13 264 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Pacs1Q8K212 961 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Zc3h10Q8R205 435 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Med24Q99K74 987 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Nkd1Q99MH6 471 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 NwcQ9CQI4 244 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Efhd2Q9D8Y0 240 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Morc1Q9WVL5 950 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gm3147A0A0J9YU88 481 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Vwa5b1A9Z1V5 1215 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Spata6lB2RV46 347 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Kif28pD3YXS5 1028 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Mcpt4P21812 246 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Pon1P52430 355 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Lrpap1P55302 360 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gnb5P62881 395 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ncf4P97369 339 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Frg1P97376 258 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Q3U4G0 281 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Upf3aQ3ULJ3 422 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Nlrc4Q3UP24 1024 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 C1orf109Q499E6 217 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Fam120bQ6RI63 786 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Slc9c1Q6UJY2 1175 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ssxb10Q6XAR7 170 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 AW551984Q8BGF0 804 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Mboat7Q8CHK3 473 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Nol6Q8R5K4 1152 aaKnown RBP9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Upb1Q8VC97 393 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 FopnlQ9CZS3 174 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Scnn1bQ9WU38 638 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Col1a2Q01149 1372 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Kctd14A0A0U1RNG7 287 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ankle1A8VU90 534 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Ppp1r36D3Z0R2 411 aa9.37□□□□□ -0.91
Ptpre-204ENSMUST00000209979 Gm8906L7N2A2 181 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms