RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 HEH2Q03281 663 aa9.4□□□□□ -0.9
snR78snR78 PDC5P16467 563 aaKnown RBP9.39□□□□□ -0.91
snR78snR78 KNS1P32350 737 aaPredicted RBP9.39□□□□□ -0.91
snR78snR78 NCL1P38205 684 aaKnown RBP9.39□□□□□ -0.91
snR78snR78 ALD4P46367 519 aaKnown RBP9.39□□□□□ -0.91
snR78snR78 YBR197CP38306 217 aa9.38□□□□□ -0.91
snR78snR78 MRPL33P20084 86 aa9.37□□□□□ -0.91
snR78snR78 MET1P36150 593 aa9.36□□□□□ -0.91
snR78snR78 APM2P38700 605 aa9.36□□□□□ -0.91
snR78snR78 RPC31P17890 251 aa9.35□□□□□ -0.91
snR78snR78 VMA3P25515 160 aa9.35□□□□□ -0.91
snR78snR78 BOI2P39969 1040 aa9.35□□□□□ -0.91
snR78snR78 TDA6Q06466 467 aa9.35□□□□□ -0.91
snR78snR78 SRS2P12954 1174 aa9.34□□□□□ -0.91
snR78snR78 ISC10P32645 267 aa9.33□□□□□ -0.92
snR78snR78 DYS1P38791 387 aa9.33□□□□□ -0.92
snR78snR78 CWC15Q03772 175 aaKnown RBP9.33□□□□□ -0.92
snR78snR78 SUB2Q07478 446 aaKnown RBP9.33□□□□□ -0.92
snR78snR78 YPR053CQ6Q5F3 151 aa9.33□□□□□ -0.92
snR78snR78 YNR040WP53736 256 aa9.32□□□□□ -0.92
snR78snR78 LDH1P38139 375 aa9.31□□□□□ -0.92
snR78snR78 LSB3P43603 459 aaKnown RBP9.31□□□□□ -0.92
snR78snR78 PRK1P40494 810 aa9.3□□□□□ -0.92
snR78snR78 YMR187CQ03236 431 aa9.3□□□□□ -0.92
snR78snR78 MCX1P38323 520 aaPredicted RBP9.28□□□□□ -0.92
snR78snR78 PNP1Q05788 311 aa9.28□□□□□ -0.92
snR78snR78 YOR296WQ08748 1289 aa9.27□□□□□ -0.93
snR78snR78 NAB2P32505 525 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
snR78snR78 RRN6P32786 894 aa9.26□□□□□ -0.93
snR78snR78 GIP1P38229 639 aa9.26□□□□□ -0.93
snR78snR78 ITC1P53125 1264 aa9.25□□□□□ -0.93
snR78snR78 ALG14P38242 237 aa9.24□□□□□ -0.93
snR78snR78 PGM2P37012 569 aaKnown RBP9.23□□□□□ -0.93
snR78snR78 ISW1P38144 1129 aa9.23□□□□□ -0.93
snR78snR78 BSD2P38356 321 aa9.23□□□□□ -0.93
snR78snR78 TPS3P38426 1054 aaKnown RBP9.23□□□□□ -0.93
snR78snR78 SKN7P38889 622 aa9.23□□□□□ -0.93
snR78snR78 CCT8P47079 568 aaKnown RBP9.22□□□□□ -0.93
snR78snR78 NHA1Q99271 985 aa9.22□□□□□ -0.93
snR78snR78 IDI1P15496 288 aa9.2□□□□□ -0.94
snR78snR78 MSN1P22148 382 aa9.2□□□□□ -0.94
snR78snR78 RPL34AP87262 121 aaPredicted RBP9.2□□□□□ -0.94
snR78snR78 FIR1P40020 876 aa9.19□□□□□ -0.94
snR78snR78 YER156CP40093 338 aaKnown RBP9.19□□□□□ -0.94
snR78snR78 FUR4P05316 633 aaKnown RBP9.18□□□□□ -0.94
snR78snR78 YCK2P23292 546 aaKnown RBP9.18□□□□□ -0.94
snR78snR78 NAR1P23503 491 aaKnown RBP9.18□□□□□ -0.94
snR78snR78 YBR287WP38355 427 aa9.18□□□□□ -0.94
snR78snR78 HXT8P40886 569 aa9.18□□□□□ -0.94
snR78snR78 SLN1P39928 1220 aaPredicted RBP9.17□□□□□ -0.94
snR78snR78 GIS4Q04233 774 aa9.17□□□□□ -0.94
snR78snR78 YDR215CQ12240 137 aa9.17□□□□□ -0.94
snR78snR78 SUT1P53032 299 aaKnown RBP9.16□□□□□ -0.94
snR78snR78 MRP10O75012 95 aa9.15□□□□□ -0.94
snR78snR78 BOI1P38041 980 aaKnown RBP9.15□□□□□ -0.94
snR78snR78 RSC2Q06488 889 aa9.15□□□□□ -0.94
snR78snR78 TAT1P38085 619 aa9.14□□□□□ -0.95
snR78snR78 YIL165CP40446 119 aa9.14□□□□□ -0.95
snR78snR78 PRY1P47032 299 aa9.14□□□□□ -0.95
snR78snR78 LSO1Q3E827 93 aa9.14□□□□□ -0.95
snR78snR78 APC11Q12157 165 aa9.13□□□□□ -0.95
snR78snR78 BOL3P39724 118 aa9.11□□□□□ -0.95
snR78snR78 YJL181WP46987 611 aa9.11□□□□□ -0.95
snR78snR78 AIM46P38885 310 aa9.1□□□□□ -0.95
snR78snR78 PPT1P53043 513 aa9.1□□□□□ -0.95
snR78snR78 RPB10P22139 70 aa9.09□□□□□ -0.95
snR78snR78 EMG1Q06287 252 aaKnown RBP9.09□□□□□ -0.95
snR78snR78 SSA1P10591 642 aaKnown RBP9.08□□□□□ -0.96
snR78snR78 RGD2P43556 714 aa9.08□□□□□ -0.96
snR78snR78 BUD9P53226 547 aa9.08□□□□□ -0.96
snR78snR78 MCA1Q08601 432 aa9.08□□□□□ -0.96
snR78snR78 SLP1Q12232 587 aa9.08□□□□□ -0.96
snR78snR78 SBP1P10080 294 aaKnown RBP9.07□□□□□ -0.96
snR78snR78 SMC1P32908 1225 aa9.07□□□□□ -0.96
snR78snR78 KTR2P33550 425 aa9.07□□□□□ -0.96
snR78snR78 KAR5Q04746 504 aa9.07□□□□□ -0.96
snR78snR78 RRM3P38766 723 aa9.06□□□□□ -0.96
snR78snR78 RAD55P38953 406 aa9.06□□□□□ -0.96
snR78snR78 NTA1P40354 457 aa9.06□□□□□ -0.96
snR78snR78 AMN1P38285 549 aaPredicted RBP9.05□□□□□ -0.96
snR78snR78 GIP2P40036 548 aa9.05□□□□□ -0.96
snR78snR78 LSB6P42951 607 aa9.05□□□□□ -0.96
snR78snR78 SOK2P53438 785 aaPredicted RBP9.05□□□□□ -0.96
snR78snR78 INP51P40559 946 aaKnown RBP9.03□□□□□ -0.96
snR78snR78 GLO3P38682 493 aaKnown RBP9.02□□□□□ -0.97
snR78snR78 TED1P40533 473 aa9.02□□□□□ -0.97
snR78snR78 GAS5Q08193 484 aa9.02□□□□□ -0.97
snR78snR78 TIF6Q12522 245 aaKnown RBP9.02□□□□□ -0.97
snR78snR78 TY4B-PA0A0B7P3V8 1104 aa9.01□□□□□ -0.97
snR78snR78 IRS4P36115 615 aaKnown RBP9.01□□□□□ -0.97
snR78snR78 YPL034WQ03083 165 aa9.01□□□□□ -0.97
snR78snR78 TY4A-HQ6Q5P6 413 aa9.01□□□□□ -0.97
snR78snR78 AI3P03877 415 aa9□□□□□ -0.97
snR78snR78 PSY2P40164 858 aa9□□□□□ -0.97
snR78snR78 SAC7P17121 654 aa8.99□□□□□ -0.97
snR78snR78 QDR1P40475 563 aa8.99□□□□□ -0.97
snR78snR78 BIO5P53744 561 aaKnown RBP8.98□□□□□ -0.97
snR78snR78 FUS1P11710 512 aa8.97□□□□□ -0.97
snR78snR78 SFA1P32771 386 aa8.97□□□□□ -0.97
snR78snR78 CDC3P32457 520 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms