RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B DSE4P53753 1117 aa2.41□□□□□ -2.02
snR39BsnR39B GIS1Q03833 894 aa2.41□□□□□ -2.02
snR39BsnR39B MAG2Q06436 670 aaKnown RBP2.41□□□□□ -2.02
snR39BsnR39B GAS5Q08193 484 aa2.41□□□□□ -2.02
snR39BsnR39B CYC7P00045 113 aa2.4□□□□□ -2.03
snR39BsnR39B YKL222CP35995 705 aa2.4□□□□□ -2.03
snR39BsnR39B APM2P38700 605 aa2.4□□□□□ -2.03
snR39BsnR39B SPO74P45819 413 aa2.4□□□□□ -2.03
snR39BsnR39B MTO1P53070 669 aa2.4□□□□□ -2.03
snR39BsnR39B Q0182Q9ZZW1 134 aa2.4□□□□□ -2.03
snR39BsnR39B YDJ1P25491 409 aaKnown RBP2.39□□□□□ -2.03
snR39BsnR39B YCR015CP25616 317 aa2.39□□□□□ -2.03
snR39BsnR39B BRL1P38770 471 aa2.39□□□□□ -2.03
snR39BsnR39B YNL165WP53891 406 aa2.39□□□□□ -2.03
snR39BsnR39B TY4B-PA0A0B7P3V8 1104 aa2.38□□□□□ -2.03
snR39BsnR39B KIN1P13185 1064 aa2.38□□□□□ -2.03
snR39BsnR39B MSB1P21339 1137 aaKnown RBP2.38□□□□□ -2.03
snR39BsnR39B KAP122P32767 1081 aa2.38□□□□□ -2.03
snR39BsnR39B SCD5P34758 872 aa2.38□□□□□ -2.03
snR39BsnR39B NTH2P35172 780 aa2.38□□□□□ -2.03
snR39BsnR39B ECL1P48235 211 aa2.38□□□□□ -2.03
snR39BsnR39B PRP43P53131 767 aaKnown RBP2.38□□□□□ -2.03
snR39BsnR39B CUS1Q02554 436 aaPredicted RBP2.38□□□□□ -2.03
snR39BsnR39B TY4A-HQ6Q5P6 413 aa2.38□□□□□ -2.03
snR39BsnR39B PUF3Q07807 879 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
snR39BsnR39B TY1A-NL1Q12391 440 aaKnown RBP2.37□□□□□ -2.03
snR39BsnR39B CYT1P07143 309 aa2.36□□□□□ -2.03
snR39BsnR39B RNQ1P25367 405 aa2.36□□□□□ -2.03
snR39BsnR39B NGR1P32831 672 aaKnown RBP2.36□□□□□ -2.03
snR39BsnR39B AKR1P39010 764 aa2.36□□□□□ -2.03
snR39BsnR39B RSC2Q06488 889 aa2.36□□□□□ -2.03
snR39BsnR39B TSC13Q99190 310 aa2.36□□□□□ -2.03
snR39BsnR39B SUP45P12385 437 aaKnown RBP2.35□□□□□ -2.03
snR39BsnR39B GIP2P40036 548 aa2.35□□□□□ -2.03
snR39BsnR39B YER156CP40093 338 aaKnown RBP2.35□□□□□ -2.03
snR39BsnR39B REC8Q12188 680 aa2.35□□□□□ -2.03
snR39BsnR39B NSI1Q12457 570 aa2.35□□□□□ -2.03
snR39BsnR39B RPC31P17890 251 aa2.34□□□□□ -2.03
snR39BsnR39B TED1P40533 473 aa2.34□□□□□ -2.03
snR39BsnR39B LEM3P42838 414 aa2.34□□□□□ -2.03
snR39BsnR39B ESC8Q08119 714 aa2.34□□□□□ -2.03
snR39BsnR39B IDI1P15496 288 aa2.33□□□□□ -2.04
snR39BsnR39B NAM7P30771 971 aaKnown RBP2.33□□□□□ -2.04
snR39BsnR39B SEG2P34250 1132 aa2.33□□□□□ -2.04
snR39BsnR39B GUA1P38625 525 aaKnown RBP2.33□□□□□ -2.04
snR39BsnR39B RIM21P48565 533 aa2.33□□□□□ -2.04
snR39BsnR39B ENO2P00925 437 aaKnown RBP2.32□□□□□ -2.04
snR39BsnR39B PDI1P17967 522 aaKnown RBP2.32□□□□□ -2.04
snR39BsnR39B UBP1P25037 809 aa2.32□□□□□ -2.04
snR39BsnR39B POL12P38121 705 aaPredicted RBP2.32□□□□□ -2.04
snR39BsnR39B YNR040WP53736 256 aa2.32□□□□□ -2.04
snR39BsnR39B MAE1P36013 669 aaKnown RBP2.31□□□□□ -2.04
snR39BsnR39B YBR287WP38355 427 aa2.31□□□□□ -2.04
snR39BsnR39B GUP1P53154 560 aa2.31□□□□□ -2.04
snR39BsnR39B SOK2P53438 785 aaPredicted RBP2.31□□□□□ -2.04
snR39BsnR39B YNL108CP53929 270 aa2.31□□□□□ -2.04
snR39BsnR39B DFG16Q99234 619 aa2.31□□□□□ -2.04
snR39BsnR39B GAS1P22146 559 aaKnown RBP2.3□□□□□ -2.04
snR39BsnR39B BIO2P32451 375 aa2.3□□□□□ -2.04
snR39BsnR39B GIP4P39732 760 aa2.3□□□□□ -2.04
snR39BsnR39B YOR296WQ08748 1289 aa2.3□□□□□ -2.04
snR39BsnR39B MRP10O75012 95 aa2.29□□□□□ -2.04
snR39BsnR39B HAP4P14064 554 aa2.29□□□□□ -2.04
snR39BsnR39B RDS2P19541 446 aaKnown RBP2.29□□□□□ -2.04
snR39BsnR39B LRG1P35688 1017 aa2.29□□□□□ -2.04
snR39BsnR39B HXT5P38695 592 aa2.29□□□□□ -2.04
snR39BsnR39B DYS1P38791 387 aa2.29□□□□□ -2.04
snR39BsnR39B QDR2P40474 542 aa2.29□□□□□ -2.04
snR39BsnR39B CWH41P53008 833 aa2.29□□□□□ -2.04
snR39BsnR39B ITC1P53125 1264 aa2.29□□□□□ -2.04
snR39BsnR39B GSF2Q04697 403 aaKnown RBP2.29□□□□□ -2.04
snR39BsnR39B HDA2Q06629 674 aa2.29□□□□□ -2.04
snR39BsnR39B GIC2Q06648 383 aa2.29□□□□□ -2.04
snR39BsnR39B GAS4Q08271 471 aa2.29□□□□□ -2.04
snR39BsnR39B YOR059CQ08448 450 aaKnown RBP2.29□□□□□ -2.04
snR39BsnR39B PHO87P25360 923 aa2.28□□□□□ -2.04
snR39BsnR39B GIP1P38229 639 aa2.28□□□□□ -2.04
snR39BsnR39B PAN5P38787 379 aa2.28□□□□□ -2.04
snR39BsnR39B NCE103P53615 221 aa2.28□□□□□ -2.04
snR39BsnR39B SDH1Q00711 640 aa2.28□□□□□ -2.04
snR39BsnR39B SPO71Q03868 1245 aa2.28□□□□□ -2.04
snR39BsnR39B MMM1P41800 426 aa2.27□□□□□ -2.05
snR39BsnR39B CIT3P43635 486 aa2.27□□□□□ -2.05
snR39BsnR39B PKC1P24583 1151 aa2.26□□□□□ -2.05
snR39BsnR39B ISW1P38144 1129 aa2.26□□□□□ -2.05
snR39BsnR39B YHL008CP38750 627 aa2.26□□□□□ -2.05
snR39BsnR39B RPN1P38764 993 aaKnown RBP2.26□□□□□ -2.05
snR39BsnR39B POL5P39985 1022 aaKnown RBP2.26□□□□□ -2.05
snR39BsnR39B PPT1P53043 513 aa2.26□□□□□ -2.05
snR39BsnR39B MRX10Q05648 414 aa2.26□□□□□ -2.05
snR39BsnR39B SOG2Q08817 791 aa2.26□□□□□ -2.05
snR39BsnR39B VAN1P23642 535 aa2.25□□□□□ -2.05
snR39BsnR39B LDH1P38139 375 aa2.25□□□□□ -2.05
snR39BsnR39B INP51P40559 946 aaKnown RBP2.25□□□□□ -2.05
snR39BsnR39B TAF1P46677 1066 aa2.25□□□□□ -2.05
snR39BsnR39B YJL181WP46987 611 aa2.25□□□□□ -2.05
snR39BsnR39B ACS2P52910 683 aaKnown RBP2.25□□□□□ -2.05
snR39BsnR39B FAR11P53917 953 aa2.25□□□□□ -2.05
snR39BsnR39B MSH6Q03834 1242 aa2.25□□□□□ -2.05
snR39BsnR39B CDA2Q06703 312 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms