RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C HAP4P14064 554 aa6.72□□□□□ -1.33
CUP9YPL177C ALG14P38242 237 aa6.72□□□□□ -1.33
CUP9YPL177C CUS1Q02554 436 aaPredicted RBP6.72□□□□□ -1.33
CUP9YPL177C NHA1Q99271 985 aa6.72□□□□□ -1.33
CUP9YPL177C NGR1P32831 672 aaKnown RBP6.71□□□□□ -1.34
CUP9YPL177C YPL034WQ03083 165 aa6.71□□□□□ -1.34
CUP9YPL177C RPC31P17890 251 aa6.7□□□□□ -1.34
CUP9YPL177C NAR1P23503 491 aaKnown RBP6.7□□□□□ -1.34
CUP9YPL177C KAP122P32767 1081 aa6.7□□□□□ -1.34
CUP9YPL177C NCL1P38205 684 aaKnown RBP6.7□□□□□ -1.34
CUP9YPL177C ROM1P53046 1155 aa6.7□□□□□ -1.34
CUP9YPL177C BUD9P53226 547 aa6.7□□□□□ -1.34
CUP9YPL177C YNR040WP53736 256 aa6.69□□□□□ -1.34
CUP9YPL177C GIS4Q04233 774 aa6.69□□□□□ -1.34
CUP9YPL177C SIS2P36024 562 aa6.68□□□□□ -1.34
CUP9YPL177C GAL2P13181 574 aa6.67□□□□□ -1.34
CUP9YPL177C APM2P38700 605 aa6.66□□□□□ -1.34
CUP9YPL177C QDR2P40474 542 aa6.64□□□□□ -1.35
CUP9YPL177C RLF2Q12495 606 aa6.64□□□□□ -1.35
CUP9YPL177C MRP10O75012 95 aa6.63□□□□□ -1.35
CUP9YPL177C AI3P03877 415 aa6.63□□□□□ -1.35
CUP9YPL177C IDI1P15496 288 aa6.62□□□□□ -1.35
CUP9YPL177C SUV3P32580 737 aa6.62□□□□□ -1.35
CUP9YPL177C CAB1Q04430 367 aa6.62□□□□□ -1.35
CUP9YPL177C GAS5Q08193 484 aa6.62□□□□□ -1.35
CUP9YPL177C VAN1P23642 535 aa6.61□□□□□ -1.35
CUP9YPL177C NAB2P32505 525 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
CUP9YPL177C PGM1P33401 570 aaKnown RBP6.61□□□□□ -1.35
CUP9YPL177C MAC1P35192 417 aa6.6□□□□□ -1.35
CUP9YPL177C TGL4P36165 910 aa6.6□□□□□ -1.35
CUP9YPL177C ITC1P53125 1264 aa6.6□□□□□ -1.35
CUP9YPL177C ALO1P54783 526 aaKnown RBP6.6□□□□□ -1.35
CUP9YPL177C RRM3P38766 723 aa6.59□□□□□ -1.35
CUP9YPL177C YER156CP40093 338 aaKnown RBP6.59□□□□□ -1.35
CUP9YPL177C TTI1P36097 1038 aa6.58□□□□□ -1.36
CUP9YPL177C INP52P50942 1183 aa6.58□□□□□ -1.36
CUP9YPL177C TRS33Q99394 268 aa6.58□□□□□ -1.36
CUP9YPL177C SAC7P17121 654 aa6.57□□□□□ -1.36
CUP9YPL177C YOR296WQ08748 1289 aa6.57□□□□□ -1.36
CUP9YPL177C GLT1Q12680 2145 aaKnown RBP6.57□□□□□ -1.36
CUP9YPL177C MRPL33P20084 86 aa6.56□□□□□ -1.36
CUP9YPL177C VMA3P25515 160 aa6.56□□□□□ -1.36
CUP9YPL177C SFA1P32771 386 aa6.56□□□□□ -1.36
CUP9YPL177C CWH41P53008 833 aa6.56□□□□□ -1.36
CUP9YPL177C ARI1P53111 347 aaKnown RBP6.56□□□□□ -1.36
CUP9YPL177C ECM23Q02710 187 aa6.56□□□□□ -1.36
CUP9YPL177C SLP1Q12232 587 aa6.55□□□□□ -1.36
CUP9YPL177C OMA1P36163 345 aa6.54□□□□□ -1.36
CUP9YPL177C BSD2P38356 321 aa6.54□□□□□ -1.36
CUP9YPL177C FOX2Q02207 900 aaKnown RBP6.54□□□□□ -1.36
CUP9YPL177C DYS1P38791 387 aa6.53□□□□□ -1.36
CUP9YPL177C YBR197CP38306 217 aa6.52□□□□□ -1.37
CUP9YPL177C GIP1P38229 639 aa6.51□□□□□ -1.37
CUP9YPL177C UBX7P38349 436 aa6.5□□□□□ -1.37
CUP9YPL177C TED1P40533 473 aa6.5□□□□□ -1.37
CUP9YPL177C TY4B-PA0A0B7P3V8 1104 aa6.49□□□□□ -1.37
CUP9YPL177C TY4A-HQ6Q5P6 413 aa6.49□□□□□ -1.37
CUP9YPL177C YKR073CP36153 106 aa6.48□□□□□ -1.37
CUP9YPL177C LDH1P38139 375 aa6.48□□□□□ -1.37
CUP9YPL177C ALD4P46367 519 aaKnown RBP6.48□□□□□ -1.37
CUP9YPL177C YLR122CQ12312 125 aa6.48□□□□□ -1.37
CUP9YPL177C TY1A-NL1Q12391 440 aaKnown RBP6.48□□□□□ -1.37
CUP9YPL177C COQ2P32378 372 aa6.47□□□□□ -1.37
CUP9YPL177C GIP2P40036 548 aa6.47□□□□□ -1.37
CUP9YPL177C TRP3P00937 484 aa6.46□□□□□ -1.38
CUP9YPL177C PUP1P25043 261 aa6.46□□□□□ -1.38
CUP9YPL177C RSC6P25632 483 aa6.46□□□□□ -1.38
CUP9YPL177C CPS1P27614 576 aa6.46□□□□□ -1.38
CUP9YPL177C ISC10P32645 267 aa6.46□□□□□ -1.38
CUP9YPL177C ISW1P38144 1129 aa6.46□□□□□ -1.38
CUP9YPL177C PPT1P53043 513 aa6.46□□□□□ -1.38
CUP9YPL177C SOK2P53438 785 aaPredicted RBP6.46□□□□□ -1.38
CUP9YPL177C RSC2Q06488 889 aa6.46□□□□□ -1.38
CUP9YPL177C KAE1P36132 386 aa6.45□□□□□ -1.38
CUP9YPL177C YIL165CP40446 119 aa6.45□□□□□ -1.38
CUP9YPL177C MSN1P22148 382 aa6.44□□□□□ -1.38
CUP9YPL177C MED7Q08278 222 aa6.44□□□□□ -1.38
CUP9YPL177C YJL181WP46987 611 aa6.43□□□□□ -1.38
CUP9YPL177C SAF1P38352 637 aa6.42□□□□□ -1.38
CUP9YPL177C IRC24P40580 263 aa6.42□□□□□ -1.38
CUP9YPL177C PUF6Q04373 656 aaKnown RBP6.42□□□□□ -1.38
CUP9YPL177C PUN1Q06991 263 aa6.41□□□□□ -1.38
CUP9YPL177C INP51P40559 946 aaKnown RBP6.4□□□□□ -1.38
CUP9YPL177C CTH1P47976 325 aa6.4□□□□□ -1.38
CUP9YPL177C DSE4P53753 1117 aa6.4□□□□□ -1.38
CUP9YPL177C EMG1Q06287 252 aaKnown RBP6.4□□□□□ -1.38
CUP9YPL177C SUB2Q07478 446 aaKnown RBP6.4□□□□□ -1.38
CUP9YPL177C REC8Q12188 680 aa6.4□□□□□ -1.38
CUP9YPL177C SSA4P22202 642 aaKnown RBP6.39□□□□□ -1.39
CUP9YPL177C KTR2P33550 425 aa6.39□□□□□ -1.39
CUP9YPL177C TFA2P36145 328 aa6.39□□□□□ -1.39
CUP9YPL177C TOS1P38288 455 aa6.39□□□□□ -1.39
CUP9YPL177C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
CUP9YPL177C SRS2P12954 1174 aa6.38□□□□□ -1.39
CUP9YPL177C PAN5P38787 379 aa6.38□□□□□ -1.39
CUP9YPL177C AKR1P39010 764 aa6.38□□□□□ -1.39
CUP9YPL177C BIO5P53744 561 aaKnown RBP6.38□□□□□ -1.39
CUP9YPL177C ALD3P54114 506 aa6.38□□□□□ -1.39
CUP9YPL177C SOG2Q08817 791 aa6.38□□□□□ -1.39
CUP9YPL177C NAM7P30771 971 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms