RNA–Protein interactions for RNA: YNR050C

LYS9, Transcript of Saccharopine dehydrogenase (NADP+, L-glutamate-forming), yeast

Gene LYS9, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS9	YNR050C	CTH1	P47976	325 aa		4.6	□□□□□ -1.67
LYS9	YNR050C	CUS1	Q02554	436 aa	Predicted RBP	4.6	□□□□□ -1.67
LYS9	YNR050C	MRX10	Q05648	414 aa		4.6	□□□□□ -1.67
LYS9	YNR050C	MED7	Q08278	222 aa		4.6	□□□□□ -1.67
LYS9	YNR050C	YLR122C	Q12312	125 aa		4.6	□□□□□ -1.67
LYS9	YNR050C	UTP4	Q06679	776 aa	Known RBP	4.59	□□□□□ -1.67
LYS9	YNR050C	CYT1	P07143	309 aa		4.58	□□□□□ -1.68
LYS9	YNR050C	AOS1	Q06624	347 aa		4.58	□□□□□ -1.68
LYS9	YNR050C	TSC13	Q99190	310 aa		4.58	□□□□□ -1.68
LYS9	YNR050C	LEU3	P08638	886 aa		4.57	□□□□□ -1.68
LYS9	YNR050C	RPC31	P17890	251 aa		4.57	□□□□□ -1.68
LYS9	YNR050C	KAE1	P36132	386 aa		4.57	□□□□□ -1.68
LYS9	YNR050C	COQ2	P32378	372 aa		4.56	□□□□□ -1.68
LYS9	YNR050C	KAP122	P32767	1081 aa		4.56	□□□□□ -1.68
LYS9	YNR050C	HXT5	P38695	592 aa		4.56	□□□□□ -1.68
LYS9	YNR050C	APM2	P38700	605 aa		4.56	□□□□□ -1.68
LYS9	YNR050C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
LYS9	YNR050C	ELM1	P32801	640 aa		4.55	□□□□□ -1.68
LYS9	YNR050C	PEP12	P32854	288 aa		4.55	□□□□□ -1.68
LYS9	YNR050C	RPN1	P38764	993 aa	Known RBP	4.55	□□□□□ -1.68
LYS9	YNR050C	IDI1	P15496	288 aa		4.54	□□□□□ -1.68
LYS9	YNR050C	NGR1	P32831	672 aa	Known RBP	4.54	□□□□□ -1.68
LYS9	YNR050C	TOS1	P38288	455 aa		4.54	□□□□□ -1.68
LYS9	YNR050C	TY4B-P	A0A0B7P3V8	1104 aa		4.53	□□□□□ -1.68
LYS9	YNR050C	ENO1	P00924	437 aa	Known RBP	4.53	□□□□□ -1.68
LYS9	YNR050C	SLP1	Q12232	587 aa		4.53	□□□□□ -1.68
LYS9	YNR050C	TY1A-NL1	Q12391	440 aa	Known RBP	4.53	□□□□□ -1.68
LYS9	YNR050C	TY4A-H	Q6Q5P6	413 aa		4.53	□□□□□ -1.68
LYS9	YNR050C	UBP1	P25037	809 aa		4.52	□□□□□ -1.69
LYS9	YNR050C	RSC6	P25632	483 aa		4.52	□□□□□ -1.69
LYS9	YNR050C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
LYS9	YNR050C	LIP5	P32875	414 aa		4.52	□□□□□ -1.69
LYS9	YNR050C	SCD5	P34758	872 aa		4.52	□□□□□ -1.69
LYS9	YNR050C	SAF1	P38352	637 aa		4.52	□□□□□ -1.69
LYS9	YNR050C	BRE4	Q07660	1125 aa		4.52	□□□□□ -1.69
LYS9	YNR050C	ACS2	P52910	683 aa	Known RBP	4.51	□□□□□ -1.69
LYS9	YNR050C	YER156C	P40093	338 aa	Known RBP	4.5	□□□□□ -1.69
LYS9	YNR050C	YJL007C	P47080	104 aa		4.5	□□□□□ -1.69
LYS9	YNR050C	ITC1	P53125	1264 aa		4.5	□□□□□ -1.69
LYS9	YNR050C	YGR130C	P53278	816 aa		4.5	□□□□□ -1.69
LYS9	YNR050C	MAG2	Q06436	670 aa	Known RBP	4.5	□□□□□ -1.69
LYS9	YNR050C	TED1	P40533	473 aa		4.49	□□□□□ -1.69
LYS9	YNR050C	NAM7	P30771	971 aa	Known RBP	4.48	□□□□□ -1.69
LYS9	YNR050C	GIP2	P40036	548 aa		4.48	□□□□□ -1.69
LYS9	YNR050C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
LYS9	YNR050C	QDR2	P40474	542 aa		4.47	□□□□□ -1.69
LYS9	YNR050C	CHS2	P14180	963 aa		4.46	□□□□□ -1.69
LYS9	YNR050C	PHO87	P25360	923 aa		4.46	□□□□□ -1.69
LYS9	YNR050C	REC8	Q12188	680 aa		4.46	□□□□□ -1.69
LYS9	YNR050C	AKR1	P39010	764 aa		4.46	□□□□□ -1.7
LYS9	YNR050C	ATG32	P40458	529 aa		4.46	□□□□□ -1.7
LYS9	YNR050C	SPO74	P45819	413 aa		4.46	□□□□□ -1.7
LYS9	YNR050C	SOK2	P53438	785 aa	Predicted RBP	4.46	□□□□□ -1.7
LYS9	YNR050C	GAS4	Q08271	471 aa		4.46	□□□□□ -1.7
LYS9	YNR050C	CYC7	P00045	113 aa		4.45	□□□□□ -1.7
LYS9	YNR050C	TIF1	P10081	395 aa	Known RBP	4.45	□□□□□ -1.7
LYS9	YNR050C	SEA4	P38164	1038 aa		4.45	□□□□□ -1.7
LYS9	YNR050C	UBP5	P39944	805 aa		4.45	□□□□□ -1.7
LYS9	YNR050C	BIM1	P40013	344 aa		4.45	□□□□□ -1.7
LYS9	YNR050C	HAP4	P14064	554 aa		4.44	□□□□□ -1.7
LYS9	YNR050C	RNQ1	P25367	405 aa		4.44	□□□□□ -1.7
LYS9	YNR050C	ROM1	P53046	1155 aa		4.44	□□□□□ -1.7
LYS9	YNR050C	YOR296W	Q08748	1289 aa		4.44	□□□□□ -1.7
LYS9	YNR050C	RTG2	P32608	588 aa	Known RBP	4.43	□□□□□ -1.7
LYS9	YNR050C	DSE4	P53753	1117 aa		4.43	□□□□□ -1.7
LYS9	YNR050C	KTR7	P40504	517 aa		4.42	□□□□□ -1.7
LYS9	YNR050C	CAB1	Q04430	367 aa		4.42	□□□□□ -1.7
LYS9	YNR050C	SUV3	P32580	737 aa		4.41	□□□□□ -1.7
LYS9	YNR050C	BSD2	P38356	321 aa		4.41	□□□□□ -1.7
LYS9	YNR050C	VMA3	P25515	160 aa		4.4	□□□□□ -1.71
LYS9	YNR050C	SEG2	P34250	1132 aa		4.39	□□□□□ -1.71
LYS9	YNR050C	LRG1	P35688	1017 aa		4.39	□□□□□ -1.71
LYS9	YNR050C	MRPL33	P20084	86 aa		4.38	□□□□□ -1.71
LYS9	YNR050C	MSB1	P21339	1137 aa	Known RBP	4.38	□□□□□ -1.71
LYS9	YNR050C	GIP1	P38229	639 aa		4.38	□□□□□ -1.71
LYS9	YNR050C	PAN5	P38787	379 aa		4.38	□□□□□ -1.71
LYS9	YNR050C	NCE103	P53615	221 aa		4.38	□□□□□ -1.71
LYS9	YNR050C	GAL2	P13181	574 aa		4.37	□□□□□ -1.71
LYS9	YNR050C	YCR015C	P25616	317 aa		4.37	□□□□□ -1.71
LYS9	YNR050C	YIL165C	P40446	119 aa		4.37	□□□□□ -1.71
LYS9	YNR050C	YJL181W	P46987	611 aa		4.37	□□□□□ -1.71
LYS9	YNR050C	PPT1	P53043	513 aa		4.37	□□□□□ -1.71
LYS9	YNR050C	RSC2	Q06488	889 aa		4.37	□□□□□ -1.71
LYS9	YNR050C	DYS1	P38791	387 aa		4.36	□□□□□ -1.71
LYS9	YNR050C	SDH1	Q00711	640 aa		4.36	□□□□□ -1.71
LYS9	YNR050C	VAN1	P23642	535 aa		4.35	□□□□□ -1.71
LYS9	YNR050C	TFA2	P36145	328 aa		4.35	□□□□□ -1.71
LYS9	YNR050C	POL5	P39985	1022 aa	Known RBP	4.35	□□□□□ -1.71
LYS9	YNR050C	INP51	P40559	946 aa	Known RBP	4.35	□□□□□ -1.71
LYS9	YNR050C	NIT1	P40447	199 aa		4.34	□□□□□ -1.71
LYS9	YNR050C	GUP1	P53154	560 aa		4.34	□□□□□ -1.71
LYS9	YNR050C	BIO5	P53744	561 aa	Known RBP	4.34	□□□□□ -1.71
LYS9	YNR050C	SOG2	Q08817	791 aa		4.34	□□□□□ -1.71
LYS9	YNR050C	GCD1	P09032	578 aa	Predicted RBP	4.33	□□□□□ -1.72
LYS9	YNR050C	ISW1	P38144	1129 aa		4.33	□□□□□ -1.72
LYS9	YNR050C	RPL34B	P40525	121 aa	Known RBP	4.33	□□□□□ -1.72
LYS9	YNR050C	LDH1	P38139	375 aa		4.32	□□□□□ -1.72
LYS9	YNR050C	YBR197C	P38306	217 aa		4.32	□□□□□ -1.72
LYS9	YNR050C	CWH41	P53008	833 aa		4.32	□□□□□ -1.72
LYS9	YNR050C	ALD3	P54114	506 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms