RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C RSC6P25632 483 aa1.48□□□□□ -2.17
NIP1YMR309C SFA1P32771 386 aa1.48□□□□□ -2.17
NIP1YMR309C SAF1P38352 637 aa1.48□□□□□ -2.17
NIP1YMR309C TFB3Q03290 321 aa1.48□□□□□ -2.17
NIP1YMR309C PRK1P40494 810 aa1.47□□□□□ -2.17
NIP1YMR309C TAF1P46677 1066 aa1.47□□□□□ -2.17
NIP1YMR309C YNL165WP53891 406 aa1.47□□□□□ -2.17
NIP1YMR309C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
NIP1YMR309C AIM9P40053 627 aaKnown RBP1.47□□□□□ -2.17
NIP1YMR309C YTA6P40328 754 aa1.47□□□□□ -2.17
NIP1YMR309C YFL034WP43564 1073 aa1.47□□□□□ -2.17
NIP1YMR309C SKP1P52286 194 aa1.47□□□□□ -2.17
NIP1YMR309C GIS4Q04233 774 aa1.47□□□□□ -2.17
NIP1YMR309C RPS6AP0CX37 236 aaKnown RBP1.46□□□□□ -2.18
NIP1YMR309C RPS6BP0CX38 236 aaPredicted RBP1.46□□□□□ -2.18
NIP1YMR309C NAR1P23503 491 aaKnown RBP1.46□□□□□ -2.18
NIP1YMR309C ECL1P48235 211 aa1.46□□□□□ -2.18
NIP1YMR309C ENO2P00925 437 aaKnown RBP1.46□□□□□ -2.18
NIP1YMR309C RDS2P19541 446 aaKnown RBP1.46□□□□□ -2.18
NIP1YMR309C BIO2P32451 375 aa1.46□□□□□ -2.18
NIP1YMR309C POL12P38121 705 aaPredicted RBP1.46□□□□□ -2.18
NIP1YMR309C BRL1P38770 471 aa1.46□□□□□ -2.18
NIP1YMR309C SPO74P45819 413 aa1.46□□□□□ -2.18
NIP1YMR309C RIM21P48565 533 aa1.46□□□□□ -2.18
NIP1YMR309C UTP4Q06679 776 aaKnown RBP1.46□□□□□ -2.18
NIP1YMR309C GAS1P22146 559 aaKnown RBP1.45□□□□□ -2.18
NIP1YMR309C MLF3P32047 452 aa1.45□□□□□ -2.18
NIP1YMR309C NGR1P32831 672 aaKnown RBP1.45□□□□□ -2.18
NIP1YMR309C AKR1P39010 764 aa1.45□□□□□ -2.18
NIP1YMR309C LEU3P08638 886 aa1.45□□□□□ -2.18
NIP1YMR309C NTH2P35172 780 aa1.45□□□□□ -2.18
NIP1YMR309C LRG1P35688 1017 aa1.45□□□□□ -2.18
NIP1YMR309C NCL1P38205 684 aaKnown RBP1.45□□□□□ -2.18
NIP1YMR309C RPN1P38764 993 aaKnown RBP1.45□□□□□ -2.18
NIP1YMR309C YML122CQ03207 126 aa1.45□□□□□ -2.18
NIP1YMR309C Q0182Q9ZZW1 134 aa1.45□□□□□ -2.18
NIP1YMR309C PKC1P24583 1151 aa1.44□□□□□ -2.18
NIP1YMR309C SLP1Q12232 587 aa1.44□□□□□ -2.18
NIP1YMR309C TSC13Q99190 310 aa1.44□□□□□ -2.18
NIP1YMR309C UBP1P25037 809 aa1.44□□□□□ -2.18
NIP1YMR309C YNL108CP53929 270 aa1.44□□□□□ -2.18
NIP1YMR309C CUS1Q02554 436 aaPredicted RBP1.44□□□□□ -2.18
NIP1YMR309C MRX10Q05648 414 aa1.44□□□□□ -2.18
NIP1YMR309C CYT1P07143 309 aa1.43□□□□□ -2.18
NIP1YMR309C RPC31P17890 251 aa1.43□□□□□ -2.18
NIP1YMR309C NFS1P25374 497 aa1.43□□□□□ -2.18
NIP1YMR309C KAP122P32767 1081 aa1.43□□□□□ -2.18
NIP1YMR309C SCD5P34758 872 aa1.43□□□□□ -2.18
NIP1YMR309C APM2P38700 605 aa1.43□□□□□ -2.18
NIP1YMR309C MTO1P53070 669 aa1.43□□□□□ -2.18
NIP1YMR309C YNR040WP53736 256 aa1.43□□□□□ -2.18
NIP1YMR309C PDI1P17967 522 aaKnown RBP1.42□□□□□ -2.18
NIP1YMR309C PEP12P32854 288 aa1.42□□□□□ -2.18
NIP1YMR309C YER156CP40093 338 aaKnown RBP1.42□□□□□ -2.18
NIP1YMR309C GSF2Q04697 403 aaKnown RBP1.42□□□□□ -2.18
NIP1YMR309C HDA2Q06629 674 aa1.42□□□□□ -2.18
NIP1YMR309C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
NIP1YMR309C TY4B-PA0A0B7P3V8 1104 aa1.42□□□□□ -2.18
NIP1YMR309C IDI1P15496 288 aa1.42□□□□□ -2.18
NIP1YMR309C NAM7P30771 971 aaKnown RBP1.42□□□□□ -2.18
NIP1YMR309C HXT5P38695 592 aa1.42□□□□□ -2.18
NIP1YMR309C TY4A-HQ6Q5P6 413 aa1.42□□□□□ -2.18
NIP1YMR309C MRP10O75012 95 aa1.41□□□□□ -2.18
NIP1YMR309C TY1A-NL1Q12391 440 aaKnown RBP1.41□□□□□ -2.18
NIP1YMR309C DFG16Q99234 619 aa1.41□□□□□ -2.18
NIP1YMR309C SDH1Q00711 640 aa1.41□□□□□ -2.18
NIP1YMR309C ENO1P00924 437 aaKnown RBP1.4□□□□□ -2.18
NIP1YMR309C PHO87P25360 923 aa1.4□□□□□ -2.18
NIP1YMR309C HGH1P48362 394 aaKnown RBP1.4□□□□□ -2.18
NIP1YMR309C ITC1P53125 1264 aa1.4□□□□□ -2.18
NIP1YMR309C DSE4P53753 1117 aa1.4□□□□□ -2.18
NIP1YMR309C GAS4Q08271 471 aa1.4□□□□□ -2.18
NIP1YMR309C HAP4P14064 554 aa1.4□□□□□ -2.19
NIP1YMR309C MSB1P21339 1137 aaKnown RBP1.4□□□□□ -2.19
NIP1YMR309C GIP2P40036 548 aa1.4□□□□□ -2.19
NIP1YMR309C QDR2P40474 542 aa1.4□□□□□ -2.19
NIP1YMR309C ACS2P52910 683 aaKnown RBP1.4□□□□□ -2.19
NIP1YMR309C REC8Q12188 680 aa1.4□□□□□ -2.19
NIP1YMR309C TED1P40533 473 aa1.39□□□□□ -2.19
NIP1YMR309C YJL007CP47080 104 aa1.39□□□□□ -2.19
NIP1YMR309C RSC2Q06488 889 aa1.39□□□□□ -2.19
NIP1YMR309C YOR296WQ08748 1289 aa1.39□□□□□ -2.19
NIP1YMR309C RPL34BP40525 121 aaKnown RBP1.39□□□□□ -2.19
NIP1YMR309C TIF1P10081 395 aaKnown RBP1.38□□□□□ -2.19
NIP1YMR309C FLR1P38124 548 aa1.38□□□□□ -2.19
NIP1YMR309C LEM3P42838 414 aa1.38□□□□□ -2.19
NIP1YMR309C SOK2P53438 785 aaPredicted RBP1.38□□□□□ -2.19
NIP1YMR309C MSH6Q03834 1242 aa1.38□□□□□ -2.19
NIP1YMR309C RTG2P32608 588 aaKnown RBP1.38□□□□□ -2.19
NIP1YMR309C SIS2P36024 562 aa1.38□□□□□ -2.19
NIP1YMR309C GIP1P38229 639 aa1.38□□□□□ -2.19
NIP1YMR309C DYS1P38791 387 aa1.38□□□□□ -2.19
NIP1YMR309C BIM1P40013 344 aa1.38□□□□□ -2.19
NIP1YMR309C ATG32P40458 529 aa1.38□□□□□ -2.19
NIP1YMR309C ROM1P53046 1155 aa1.38□□□□□ -2.19
NIP1YMR309C GUP1P53154 560 aa1.38□□□□□ -2.19
NIP1YMR309C YNR065CP53751 1116 aa1.38□□□□□ -2.19
NIP1YMR309C CAB1Q04430 367 aa1.38□□□□□ -2.19
NIP1YMR309C PNS1Q12412 539 aa1.38□□□□□ -2.19
NIP1YMR309C MRPL33P20084 86 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms