RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	TIM54	P47045	478 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	YDL129W	Q07555	291 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	OXR1	Q08952	273 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	HIF1	Q12373	385 aa		6.14	□□□□□ -1.43
SIS2	YKR072C	NOP14	Q99207	810 aa	Known RBP	6.14	□□□□□ -1.43
SIS2	YKR072C	TEC1	P18412	486 aa		6.13	□□□□□ -1.43
SIS2	YKR072C	PEX8	P53248	589 aa		6.13	□□□□□ -1.43
SIS2	YKR072C	UFD2	P54860	961 aa		6.13	□□□□□ -1.43
SIS2	YKR072C	SPO20	Q04359	397 aa		6.13	□□□□□ -1.43
SIS2	YKR072C	ENT2	Q05785	613 aa		6.13	□□□□□ -1.43
SIS2	YKR072C	RPN12	P32496	274 aa		6.12	□□□□□ -1.43
SIS2	YKR072C	CWH41	P53008	833 aa		6.12	□□□□□ -1.43
SIS2	YKR072C	FOX2	Q02207	900 aa	Known RBP	6.12	□□□□□ -1.43
SIS2	YKR072C	TDA5	Q06417	326 aa	Known RBP	6.12	□□□□□ -1.43
SIS2	YKR072C	YFL034W	P43564	1073 aa		6.11	□□□□□ -1.43
SIS2	YKR072C	APL6	P46682	809 aa		6.11	□□□□□ -1.43
SIS2	YKR072C	DAN4	P47179	1161 aa		6.11	□□□□□ -1.43
SIS2	YKR072C	SAM37	P50110	327 aa		6.11	□□□□□ -1.43
SIS2	YKR072C	GDE1	Q02979	1223 aa		6.11	□□□□□ -1.43
SIS2	YKR072C	CDC73	Q06697	393 aa		6.11	□□□□□ -1.43
SIS2	YKR072C	DCW1	P36091	449 aa		6.1	□□□□□ -1.43
SIS2	YKR072C	YNR029C	P53729	429 aa	Known RBP	6.1	□□□□□ -1.43
SIS2	YKR072C	ATG16	Q03818	150 aa		6.1	□□□□□ -1.43
SIS2	YKR072C	YOR378W	Q08902	515 aa		6.1	□□□□□ -1.43
SIS2	YKR072C	SUV3	P32580	737 aa		6.1	□□□□□ -1.43
SIS2	YKR072C	SVL3	Q03088	825 aa	Known RBP	6.1	□□□□□ -1.43
SIS2	YKR072C	SLX4	Q12098	748 aa		6.1	□□□□□ -1.43
SIS2	YKR072C	ADR1	P07248	1323 aa		6.09	□□□□□ -1.43
SIS2	YKR072C	SPF1	P39986	1215 aa	Known RBP	6.09	□□□□□ -1.43
SIS2	YKR072C	YGR021W	P53212	290 aa		6.09	□□□□□ -1.43
SIS2	YKR072C	YRR1	Q12172	810 aa		6.09	□□□□□ -1.43
SIS2	YKR072C	PRI2	P20457	528 aa		6.08	□□□□□ -1.44
SIS2	YKR072C	RPS0A	P32905	252 aa	Known RBP	6.08	□□□□□ -1.44
SIS2	YKR072C	DAS1	P47005	663 aa		6.08	□□□□□ -1.44
SIS2	YKR072C	FAA4	P47912	694 aa	Known RBP	6.08	□□□□□ -1.44
SIS2	YKR072C	TYW3	P53177	273 aa		6.08	□□□□□ -1.44
SIS2	YKR072C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
SIS2	YKR072C	FLC1	Q08967	793 aa		6.08	□□□□□ -1.44
SIS2	YKR072C	TMA7	Q3E764	64 aa	Known RBP	6.08	□□□□□ -1.44
SIS2	YKR072C	YHR020W	P38708	688 aa	Known RBP	6.07	□□□□□ -1.44
SIS2	YKR072C	SNF7	P39929	240 aa	Known RBP	6.07	□□□□□ -1.44
SIS2	YKR072C	FIG4	P42837	879 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	TUB4	P53378	473 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	MTC5	Q03897	1148 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	YPR084W	Q06821	456 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	OPI10	Q08202	246 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
SIS2	YKR072C	YDL206W	Q12424	762 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	UBP1	P25037	809 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	SFP1	P32432	683 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	YHL008C	P38750	627 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	CIC1	P38779	376 aa	Known RBP	6.07	□□□□□ -1.44
SIS2	YKR072C	CDC55	Q00362	526 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	NYV1	Q12255	253 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	ERP4	Q12450	207 aa		6.07	□□□□□ -1.44
SIS2	YKR072C	ATP4	P05626	244 aa		6.06	□□□□□ -1.44
SIS2	YKR072C	KEX2	P13134	814 aa		6.06	□□□□□ -1.44
SIS2	YKR072C	CDC34	P14682	295 aa		6.06	□□□□□ -1.44
SIS2	YKR072C	RSP5	P39940	809 aa	Known RBP	6.06	□□□□□ -1.44
SIS2	YKR072C	AIM9	P40053	627 aa	Known RBP	6.06	□□□□□ -1.44
SIS2	YKR072C	YNL011C	P53980	444 aa		6.06	□□□□□ -1.44
SIS2	YKR072C	BDS1	Q08347	646 aa		6.06	□□□□□ -1.44
SIS2	YKR072C	APC11	Q12157	165 aa		6.06	□□□□□ -1.44
SIS2	YKR072C	HXK1	P04806	485 aa	Known RBP	6.05	□□□□□ -1.44
SIS2	YKR072C	HTA1	P04911	132 aa	Known RBP	6.05	□□□□□ -1.44
SIS2	YKR072C	HTA2	P04912	132 aa		6.05	□□□□□ -1.44
SIS2	YKR072C	CDC11	P32458	415 aa		6.05	□□□□□ -1.44
SIS2	YKR072C	MTC2	P34246	357 aa		6.05	□□□□□ -1.44
SIS2	YKR072C	GGA2	P38817	585 aa	Known RBP	6.05	□□□□□ -1.44
SIS2	YKR072C	RPS0B	P46654	252 aa	Known RBP	6.05	□□□□□ -1.44
SIS2	YKR072C	TMA17	Q12513	150 aa		6.05	□□□□□ -1.44
SIS2	YKR072C	ERR1	P0CX10	437 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	ERR2	P0CX11	437 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	RPL8A	P17076	256 aa	Known RBP	6.04	□□□□□ -1.44
SIS2	YKR072C	RPB10	P22139	70 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	ISC10	P32645	267 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	YBR197C	P38306	217 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	MRPS18	P42847	217 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	YFR016C	P43597	1233 aa	Known RBP	6.04	□□□□□ -1.44
SIS2	YKR072C	YGR053C	P53234	283 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	NTH2	P35172	780 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	BLI1	P35727	113 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	YGR125W	P53273	1036 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	NOC3	Q07896	663 aa	Predicted RBP	6.04	□□□□□ -1.44
SIS2	YKR072C	MCD1	Q12158	566 aa		6.04	□□□□□ -1.44
SIS2	YKR072C	CYT1	P07143	309 aa		6.03	□□□□□ -1.44
SIS2	YKR072C	NGR1	P32831	672 aa	Known RBP	6.03	□□□□□ -1.44
SIS2	YKR072C	YGR237C	P50089	785 aa		6.03	□□□□□ -1.44
SIS2	YKR072C	RPA14	P50106	137 aa		6.03	□□□□□ -1.44
SIS2	YKR072C	SPO75	Q07798	868 aa		6.03	□□□□□ -1.44
SIS2	YKR072C	NTG2	Q08214	380 aa		6.03	□□□□□ -1.44
SIS2	YKR072C	OSH2	Q12451	1283 aa		6.03	□□□□□ -1.44
SIS2	YKR072C	MSH2	P25847	964 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	HIR1	P32479	840 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	FAA3	P39002	694 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	NIT1	P40447	199 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	BDP1	P46678	594 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	HLJ1	P48353	224 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	JIP4	Q03361	876 aa		6.02	□□□□□ -1.45
SIS2	YKR072C	TOS4	Q06266	489 aa		6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms