RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	STH1	P32597	1359 aa		11.08	□□□□□ -0.64
PAM17	YKR065C	PHO87	P25360	923 aa		11.08	□□□□□ -0.64
PAM17	YKR065C	TTI1	P36097	1038 aa		11.08	□□□□□ -0.64
PAM17	YKR065C	HPF1	Q05164	967 aa		11.08	□□□□□ -0.64
PAM17	YKR065C	HAP4	P14064	554 aa		11.07	□□□□□ -0.64
PAM17	YKR065C	KTR7	P40504	517 aa		11.07	□□□□□ -0.64
PAM17	YKR065C	RGA2	Q06407	1009 aa		11.06	□□□□□ -0.64
PAM17	YKR065C	MCM1	P11746	286 aa		11.05	□□□□□ -0.64
PAM17	YKR065C	ACS2	P52910	683 aa	Known RBP	11.04	□□□□□ -0.64
PAM17	YKR065C	IRE1	P32361	1115 aa		11.03	□□□□□ -0.64
PAM17	YKR065C	LYS5	P50113	272 aa		11.03	□□□□□ -0.64
PAM17	YKR065C	GAS4	Q08271	471 aa		11.03	□□□□□ -0.64
PAM17	YKR065C	VTH1	P40438	1549 aa		11.03	□□□□□ -0.64
PAM17	YKR065C	VTH2	P40890	1549 aa		11.03	□□□□□ -0.64
PAM17	YKR065C	RPA190	P10964	1664 aa	Known RBP	11.02	□□□□□ -0.64
PAM17	YKR065C	GAL2	P13181	574 aa		11.02	□□□□□ -0.65
PAM17	YKR065C	CUZ1	P53899	274 aa		11.02	□□□□□ -0.65
PAM17	YKR065C	DPH6	Q12429	685 aa		11.02	□□□□□ -0.65
PAM17	YKR065C	CYT1	P07143	309 aa		11	□□□□□ -0.65
PAM17	YKR065C	TRK2	P28584	889 aa		11	□□□□□ -0.65
PAM17	YKR065C	TGL4	P36165	910 aa		11	□□□□□ -0.65
PAM17	YKR065C	SHM1	P37292	490 aa	Predicted RBP	10.99	□□□□□ -0.65
PAM17	YKR065C	UBP1	P25037	809 aa		10.98	□□□□□ -0.65
PAM17	YKR065C	DIT1	P21623	536 aa		10.97	□□□□□ -0.65
PAM17	YKR065C	NUP159	P40477	1460 aa		10.95	□□□□□ -0.66
PAM17	YKR065C	LTE1	P07866	1435 aa		10.95	□□□□□ -0.66
PAM17	YKR065C	CPS1	P27614	576 aa		10.95	□□□□□ -0.66
PAM17	YKR065C	CEM1	P39525	442 aa		10.95	□□□□□ -0.66
PAM17	YKR065C	JJJ3	P47138	172 aa		10.95	□□□□□ -0.66
PAM17	YKR065C	YMR265C	Q03508	461 aa	Known RBP	10.95	□□□□□ -0.66
PAM17	YKR065C	SNQ2	P32568	1501 aa	Known RBP	10.94	□□□□□ -0.66
PAM17	YKR065C	PDC6	P26263	563 aa	Known RBP	10.93	□□□□□ -0.66
PAM17	YKR065C	ROM1	P53046	1155 aa		10.93	□□□□□ -0.66
PAM17	YKR065C	PSH1	Q12161	406 aa		10.93	□□□□□ -0.66
PAM17	YKR065C	RPS31	P05759	152 aa	Known RBP	10.92	□□□□□ -0.66
PAM17	YKR065C	YDR461C-A	Q2V2P7	80 aa		10.92	□□□□□ -0.66
PAM17	YKR065C	SNT2	P53127	1403 aa		10.92	□□□□□ -0.66
PAM17	YKR065C	TY1B-JR2	P47100	1755 aa	Known RBP	10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-ER2	Q03619	1755 aa		10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-MR1	Q04214	1755 aa		10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-MR2	Q04670	1755 aa	Known RBP	10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-LR1	Q12088	1755 aa	Known RBP	10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-NL1	Q12112	1755 aa		10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-GR1	Q12141	1755 aa		10.91	□□□□□ -0.66
PAM17	YKR065C	TY1B-BL	Q12490	1755 aa		10.91	□□□□□ -0.66
PAM17	YKR065C	ECM23	Q02710	187 aa		10.91	□□□□□ -0.66
PAM17	YKR065C	YTA6	P40328	754 aa		10.9	□□□□□ -0.66
PAM17	YKR065C	KRE33	P53914	1056 aa	Known RBP	10.9	□□□□□ -0.66
PAM17	YKR065C	SSA4	P22202	642 aa	Known RBP	10.89	□□□□□ -0.67
PAM17	YKR065C	NGR1	P32831	672 aa	Known RBP	10.89	□□□□□ -0.67
PAM17	YKR065C	MET10	P39692	1035 aa		10.89	□□□□□ -0.67
PAM17	YKR065C	SYT1	Q06836	1226 aa		10.89	□□□□□ -0.67
PAM17	YKR065C	RLF2	Q12495	606 aa		10.89	□□□□□ -0.67
PAM17	YKR065C	VAN1	P23642	535 aa		10.88	□□□□□ -0.67
PAM17	YKR065C	YNL165W	P53891	406 aa		10.88	□□□□□ -0.67
PAM17	YKR065C	NTE1	Q04958	1679 aa		10.88	□□□□□ -0.67
PAM17	YKR065C	LEU1	P07264	779 aa	Known RBP	10.87	□□□□□ -0.67
PAM17	YKR065C	PUP1	P25043	261 aa		10.87	□□□□□ -0.67
PAM17	YKR065C	UTP4	Q06679	776 aa	Known RBP	10.86	□□□□□ -0.67
PAM17	YKR065C	RPO21	P04050	1733 aa	Known RBP	10.85	□□□□□ -0.67
PAM17	YKR065C	MLF3	P32047	452 aa		10.85	□□□□□ -0.67
PAM17	YKR065C	SCD5	P34758	872 aa		10.85	□□□□□ -0.67
PAM17	YKR065C	ADE12	P80210	433 aa	Known RBP	10.85	□□□□□ -0.67
PAM17	YKR065C	TRS33	Q99394	268 aa		10.85	□□□□□ -0.67
PAM17	YKR065C	Q0182	Q9ZZW1	134 aa		10.85	□□□□□ -0.67
PAM17	YKR065C	GEA2	P39993	1459 aa	Known RBP	10.85	□□□□□ -0.67
PAM17	YKR065C	RPP1A	P05318	106 aa	Predicted RBP	10.84	□□□□□ -0.67
PAM17	YKR065C	MRPL16	P38064	232 aa		10.84	□□□□□ -0.67
PAM17	YKR065C	UBX7	P38349	436 aa		10.84	□□□□□ -0.67
PAM17	YKR065C	VPS15	P22219	1454 aa		10.83	□□□□□ -0.68
PAM17	YKR065C	CWH41	P53008	833 aa		10.83	□□□□□ -0.68
PAM17	YKR065C	STB3	Q12427	513 aa		10.83	□□□□□ -0.68
PAM17	YKR065C	ALD2	P47771	506 aa		10.82	□□□□□ -0.68
PAM17	YKR065C	FPS1	P23900	669 aa		10.81	□□□□□ -0.68
PAM17	YKR065C	HXT5	P38695	592 aa		10.8	□□□□□ -0.68
PAM17	YKR065C	SPR3	P41901	512 aa		10.8	□□□□□ -0.68
PAM17	YKR065C	MLP2	P40457	1679 aa		10.79	□□□□□ -0.68
PAM17	YKR065C	PDR15	Q04182	1529 aa	Known RBP	10.79	□□□□□ -0.68
PAM17	YKR065C	RGP1	P16664	663 aa		10.78	□□□□□ -0.68
PAM17	YKR065C	PUF6	Q04373	656 aa	Known RBP	10.78	□□□□□ -0.68
PAM17	YKR065C	YRF1-1	P0CX20	1796 aa		10.77	□□□□□ -0.69
PAM17	YKR065C	YRF1-5	P0CX21	1796 aa		10.77	□□□□□ -0.69
PAM17	YKR065C	YRF1-8	P0CX22	1796 aa		10.77	□□□□□ -0.69
PAM17	YKR065C	PDR12	Q02785	1511 aa		10.75	□□□□□ -0.69
PAM17	YKR065C	DRS2	P39524	1355 aa		10.75	□□□□□ -0.69
PAM17	YKR065C	NOB1	Q08444	459 aa	Known RBP	10.74	□□□□□ -0.69
PAM17	YKR065C	ULS1	Q08562	1619 aa		10.73	□□□□□ -0.69
PAM17	YKR065C	AI1	P03875	834 aa		10.73	□□□□□ -0.69
PAM17	YKR065C	SUV3	P32580	737 aa		10.73	□□□□□ -0.69
PAM17	YKR065C	MTO1	P53070	669 aa		10.73	□□□□□ -0.69
PAM17	YKR065C	GEA1	P47102	1408 aa	Predicted RBP	10.73	□□□□□ -0.69
PAM17	YKR065C	CAT8	P39113	1433 aa		10.71	□□□□□ -0.69
PAM17	YKR065C	CAB1	Q04430	367 aa		10.71	□□□□□ -0.69
PAM17	YKR065C	KAP122	P32767	1081 aa		10.7	□□□□□ -0.7
PAM17	YKR065C	SKP1	P52286	194 aa		10.7	□□□□□ -0.7
PAM17	YKR065C	YML083C	Q04526	418 aa		10.7	□□□□□ -0.7
PAM17	YKR065C	ICP55	P40051	511 aa		10.69	□□□□□ -0.7
PAM17	YKR065C	PHM7	Q12252	991 aa		10.69	□□□□□ -0.7
PAM17	YKR065C	GPM1	P00950	247 aa	Known RBP	10.68	□□□□□ -0.7
PAM17	YKR065C	ALD4	P46367	519 aa	Known RBP	10.68	□□□□□ -0.7

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms