RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C UBP1P25037 809 aa4.59□□□□□ -1.67
SHE2YKL130C KAP122P32767 1081 aa4.59□□□□□ -1.67
SHE2YKL130C MAC1P35192 417 aa4.59□□□□□ -1.67
SHE2YKL130C SKP1P52286 194 aa4.59□□□□□ -1.67
SHE2YKL130C YPL034WQ03083 165 aa4.59□□□□□ -1.67
SHE2YKL130C NGR1P32831 672 aaKnown RBP4.58□□□□□ -1.68
SHE2YKL130C SIS2P36024 562 aa4.58□□□□□ -1.68
SHE2YKL130C GAL2P13181 574 aa4.57□□□□□ -1.68
SHE2YKL130C NAR1P23503 491 aaKnown RBP4.57□□□□□ -1.68
SHE2YKL130C NAB2P32505 525 aaKnown RBP RIP-Chip data4.57□□□□□ -1.68not detected
SHE2YKL130C HXT5P38695 592 aa4.57□□□□□ -1.68
SHE2YKL130C APM2P38700 605 aa4.57□□□□□ -1.68
SHE2YKL130C BUD9P53226 547 aa4.57□□□□□ -1.68
SHE2YKL130C VAN1P23642 535 aa4.56□□□□□ -1.68
SHE2YKL130C ROM1P53046 1155 aa4.56□□□□□ -1.68
SHE2YKL130C YNR040WP53736 256 aa4.56□□□□□ -1.68
SHE2YKL130C ALO1P54783 526 aaKnown RBP4.56□□□□□ -1.68
SHE2YKL130C GIS4Q04233 774 aa4.56□□□□□ -1.68
SHE2YKL130C QDR2P40474 542 aa4.55□□□□□ -1.68
SHE2YKL130C CWH41P53008 833 aa4.55□□□□□ -1.68
SHE2YKL130C RPC31P17890 251 aa4.54□□□□□ -1.68
SHE2YKL130C RRM3P38766 723 aa4.54□□□□□ -1.68
SHE2YKL130C GAS5Q08193 484 aa4.54□□□□□ -1.68
SHE2YKL130C ECM23Q02710 187 aa4.53□□□□□ -1.68
SHE2YKL130C AI3P03877 415 aa4.52□□□□□ -1.69
SHE2YKL130C OMA1P36163 345 aa4.52□□□□□ -1.69
SHE2YKL130C TRS33Q99394 268 aa4.52□□□□□ -1.69
SHE2YKL130C MRP10O75012 95 aa4.51□□□□□ -1.69
SHE2YKL130C SAC7P17121 654 aa4.51□□□□□ -1.69
SHE2YKL130C TGL4P36165 910 aa4.51□□□□□ -1.69
SHE2YKL130C FOX2Q02207 900 aaKnown RBP4.51□□□□□ -1.69
SHE2YKL130C IDI1P15496 288 aa4.5□□□□□ -1.69
SHE2YKL130C CAB1Q04430 367 aa4.5□□□□□ -1.69
SHE2YKL130C UBX7P38349 436 aa4.49□□□□□ -1.69
SHE2YKL130C INP52P50942 1183 aa4.49□□□□□ -1.69
SHE2YKL130C ARI1P53111 347 aaKnown RBP4.49□□□□□ -1.69
SHE2YKL130C ITC1P53125 1264 aa4.49□□□□□ -1.69
SHE2YKL130C MRPL33P20084 86 aa4.48□□□□□ -1.69
SHE2YKL130C VMA3P25515 160 aa4.48□□□□□ -1.69
SHE2YKL130C COQ2P32378 372 aa4.48□□□□□ -1.69
SHE2YKL130C SUV3P32580 737 aa4.48□□□□□ -1.69
SHE2YKL130C SFA1P32771 386 aa4.48□□□□□ -1.69
SHE2YKL130C PGM1P33401 570 aaKnown RBP4.48□□□□□ -1.69
SHE2YKL130C TTI1P36097 1038 aa4.48□□□□□ -1.69
SHE2YKL130C DYS1P38791 387 aa4.48□□□□□ -1.69
SHE2YKL130C YER156CP40093 338 aaKnown RBP4.48□□□□□ -1.69
SHE2YKL130C YOR296WQ08748 1289 aa4.48□□□□□ -1.69
SHE2YKL130C SLP1Q12232 587 aa4.48□□□□□ -1.69
SHE2YKL130C BSD2P38356 321 aa4.47□□□□□ -1.69
SHE2YKL130C LDH1P38139 375 aa4.46□□□□□ -1.7
SHE2YKL130C GIP1P38229 639 aa4.46□□□□□ -1.7
SHE2YKL130C TED1P40533 473 aa4.46□□□□□ -1.7
SHE2YKL130C RSC6P25632 483 aa4.45□□□□□ -1.7
SHE2YKL130C YBR197CP38306 217 aa4.45□□□□□ -1.7
SHE2YKL130C GIP2P40036 548 aa4.45□□□□□ -1.7
SHE2YKL130C SOK2P53438 785 aaPredicted RBP4.45□□□□□ -1.7
SHE2YKL130C RSC2Q06488 889 aa4.45□□□□□ -1.7
SHE2YKL130C TY4B-PA0A0B7P3V8 1104 aa4.44□□□□□ -1.7
SHE2YKL130C CPS1P27614 576 aa4.44□□□□□ -1.7
SHE2YKL130C KAE1P36132 386 aa4.44□□□□□ -1.7
SHE2YKL130C ISW1P38144 1129 aa4.44□□□□□ -1.7
SHE2YKL130C LEO1P38439 464 aa4.44□□□□□ -1.7
SHE2YKL130C YJL181WP46987 611 aa4.44□□□□□ -1.7
SHE2YKL130C MED7Q08278 222 aa4.44□□□□□ -1.7
SHE2YKL130C TY4A-HQ6Q5P6 413 aa4.44□□□□□ -1.7
SHE2YKL130C ISC10P32645 267 aa4.43□□□□□ -1.7
SHE2YKL130C ALD4P46367 519 aaKnown RBP4.43□□□□□ -1.7
SHE2YKL130C PPT1P53043 513 aa4.43□□□□□ -1.7
SHE2YKL130C TRP3P00937 484 aa4.42□□□□□ -1.7
SHE2YKL130C IRC24P40580 263 aa4.42□□□□□ -1.7
SHE2YKL130C DSE4P53753 1117 aa4.42□□□□□ -1.7
SHE2YKL130C DMA2P53924 522 aa4.42□□□□□ -1.7
SHE2YKL130C PUN1Q06991 263 aa4.42□□□□□ -1.7
SHE2YKL130C YLR122CQ12312 125 aa4.42□□□□□ -1.7
SHE2YKL130C LIP5P32875 414 aa4.41□□□□□ -1.7
SHE2YKL130C YKR073CP36153 106 aa4.41□□□□□ -1.7
SHE2YKL130C YIL165CP40446 119 aa4.41□□□□□ -1.7
SHE2YKL130C TY1A-NL1Q12391 440 aaKnown RBP4.41□□□□□ -1.7
SHE2YKL130C CHS2P14180 963 aa4.4□□□□□ -1.71
SHE2YKL130C MSN1P22148 382 aa4.4□□□□□ -1.71
SHE2YKL130C PUP1P25043 261 aa4.4□□□□□ -1.71
SHE2YKL130C TOS1P38288 455 aa4.4□□□□□ -1.71
SHE2YKL130C SAF1P38352 637 aa4.4□□□□□ -1.71
SHE2YKL130C AKR1P39010 764 aa4.4□□□□□ -1.71
SHE2YKL130C YGR130CP53278 816 aa4.4□□□□□ -1.71
SHE2YKL130C PUF6Q04373 656 aaKnown RBP4.4□□□□□ -1.71
SHE2YKL130C NAM7P30771 971 aaKnown RBP4.39□□□□□ -1.71
SHE2YKL130C YBR287WP38355 427 aa4.39□□□□□ -1.71
SHE2YKL130C FIR1P40020 876 aa4.39□□□□□ -1.71
SHE2YKL130C AVT1P47082 602 aa4.39□□□□□ -1.71
SHE2YKL130C INP51P40559 946 aaKnown RBP4.38□□□□□ -1.71
SHE2YKL130C SRS2P12954 1174 aa4.37□□□□□ -1.71
SHE2YKL130C PAN5P38787 379 aa4.37□□□□□ -1.71
SHE2YKL130C HXT8P40886 569 aa4.37□□□□□ -1.71
SHE2YKL130C EMG1Q06287 252 aaKnown RBP4.37□□□□□ -1.71
SHE2YKL130C REC8Q12188 680 aa4.37□□□□□ -1.71
SHE2YKL130C AIM46P38885 310 aa4.36□□□□□ -1.71
SHE2YKL130C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
SHE2YKL130C PUB1P32588 453 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SHE2YKL130C GUP1P53154 560 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms