RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C QDR2P40474 542 aa6.36□□□□□ -1.39
TRS20YBR254C YNR040WP53736 256 aa6.36□□□□□ -1.39
TRS20YBR254C FOX2Q02207 900 aaKnown RBP6.36□□□□□ -1.39
TRS20YBR254C NOB1Q08444 459 aaKnown RBP6.36□□□□□ -1.39
TRS20YBR254C SSA4P22202 642 aaKnown RBP6.34□□□□□ -1.39
TRS20YBR254C NCL1P38205 684 aaKnown RBP6.34□□□□□ -1.39
TRS20YBR254C YBR197CP38306 217 aa6.34□□□□□ -1.39
TRS20YBR254C MCX1P38323 520 aaPredicted RBP6.34□□□□□ -1.39
TRS20YBR254C YMR187CQ03236 431 aa6.34□□□□□ -1.39
TRS20YBR254C HEH2Q03281 663 aa6.34□□□□□ -1.39
TRS20YBR254C MRPL33P20084 86 aa6.33□□□□□ -1.4
TRS20YBR254C VMA3P25515 160 aa6.33□□□□□ -1.4
TRS20YBR254C NAB2P32505 525 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
TRS20YBR254C APM2P38700 605 aa6.33□□□□□ -1.4
TRS20YBR254C SKN7P38889 622 aa6.33□□□□□ -1.4
TRS20YBR254C PRK1P40494 810 aa6.33□□□□□ -1.4
TRS20YBR254C ALD4P46367 519 aaKnown RBP6.33□□□□□ -1.4
TRS20YBR254C CCT8P47079 568 aaKnown RBP6.33□□□□□ -1.4
TRS20YBR254C MET1P36150 593 aa6.32□□□□□ -1.4
TRS20YBR254C PUF6Q04373 656 aaKnown RBP6.32□□□□□ -1.4
TRS20YBR254C PUN1Q06991 263 aa6.32□□□□□ -1.4
TRS20YBR254C YCK2P23292 546 aaKnown RBP6.31□□□□□ -1.4
TRS20YBR254C ISC10P32645 267 aa6.3□□□□□ -1.4
TRS20YBR254C SLN1P39928 1220 aaPredicted RBP6.29□□□□□ -1.4
TRS20YBR254C ITC1P53125 1264 aa6.29□□□□□ -1.4
TRS20YBR254C CWC15Q03772 175 aaKnown RBP6.29□□□□□ -1.4
TRS20YBR254C YDR215CQ12240 137 aa6.29□□□□□ -1.4
TRS20YBR254C SRS2P12954 1174 aa6.28□□□□□ -1.4
TRS20YBR254C PGM2P37012 569 aaKnown RBP6.28□□□□□ -1.4
TRS20YBR254C BSD2P38356 321 aa6.28□□□□□ -1.4
TRS20YBR254C DYS1P38791 387 aa6.28□□□□□ -1.4
TRS20YBR254C MRP10O75012 95 aa6.27□□□□□ -1.41
TRS20YBR254C ALG14P38242 237 aa6.27□□□□□ -1.41
TRS20YBR254C YOR296WQ08748 1289 aa6.27□□□□□ -1.41
TRS20YBR254C IDI1P15496 288 aa6.26□□□□□ -1.41
TRS20YBR254C LDH1P38139 375 aa6.26□□□□□ -1.41
TRS20YBR254C TPS3P38426 1054 aaKnown RBP6.26□□□□□ -1.41
TRS20YBR254C NHA1Q99271 985 aa6.26□□□□□ -1.41
TRS20YBR254C NAR1P23503 491 aaKnown RBP6.25□□□□□ -1.41
TRS20YBR254C GIP1P38229 639 aa6.25□□□□□ -1.41
TRS20YBR254C PRY1P47032 299 aa6.25□□□□□ -1.41
TRS20YBR254C SUB2Q07478 446 aaKnown RBP6.25□□□□□ -1.41
TRS20YBR254C RLF2Q12495 606 aa6.25□□□□□ -1.41
TRS20YBR254C GIS4Q04233 774 aa6.24□□□□□ -1.41
TRS20YBR254C PNP1Q05788 311 aa6.24□□□□□ -1.41
TRS20YBR254C MCA1Q08601 432 aa6.24□□□□□ -1.41
TRS20YBR254C YER156CP40093 338 aaKnown RBP6.23□□□□□ -1.41
TRS20YBR254C MSN1P22148 382 aa6.22□□□□□ -1.41
TRS20YBR254C BOI1P38041 980 aaKnown RBP6.21□□□□□ -1.42
TRS20YBR254C TAT1P38085 619 aa6.21□□□□□ -1.42
TRS20YBR254C ISW1P38144 1129 aa6.21□□□□□ -1.42
TRS20YBR254C KTR2P33550 425 aa6.2□□□□□ -1.42
TRS20YBR254C AMN1P38285 549 aaPredicted RBP6.2□□□□□ -1.42
TRS20YBR254C YIL165CP40446 119 aa6.19□□□□□ -1.42
TRS20YBR254C HXT8P40886 569 aa6.19□□□□□ -1.42
TRS20YBR254C BUD9P53226 547 aa6.19□□□□□ -1.42
TRS20YBR254C RRN6P32786 894 aa6.18□□□□□ -1.42
TRS20YBR254C LSB6P42951 607 aa6.18□□□□□ -1.42
TRS20YBR254C GAS5Q08193 484 aa6.18□□□□□ -1.42
TRS20YBR254C SBP1P10080 294 aaKnown RBP6.17□□□□□ -1.42
TRS20YBR254C YJL181WP46987 611 aa6.17□□□□□ -1.42
TRS20YBR254C SUT1P53032 299 aaKnown RBP6.17□□□□□ -1.42
TRS20YBR254C PPT1P53043 513 aa6.17□□□□□ -1.42
TRS20YBR254C EMG1Q06287 252 aaKnown RBP6.17□□□□□ -1.42
TRS20YBR254C APC11Q12157 165 aa6.17□□□□□ -1.42
TRS20YBR254C RPB10P22139 70 aa6.16□□□□□ -1.42
TRS20YBR254C RRM3P38766 723 aa6.16□□□□□ -1.42
TRS20YBR254C BOL3P39724 118 aa6.15□□□□□ -1.42
TRS20YBR254C FIR1P40020 876 aa6.15□□□□□ -1.42
TRS20YBR254C RGD2P43556 714 aa6.15□□□□□ -1.42
TRS20YBR254C RSC2Q06488 889 aa6.15□□□□□ -1.42
TRS20YBR254C LSO1Q3E827 93 aa6.15□□□□□ -1.42
TRS20YBR254C YPL034WQ03083 165 aa6.14□□□□□ -1.43
TRS20YBR254C FUR4P05316 633 aaKnown RBP6.13□□□□□ -1.43
TRS20YBR254C GIP2P40036 548 aa6.13□□□□□ -1.43
TRS20YBR254C TED1P40533 473 aa6.13□□□□□ -1.43
TRS20YBR254C SOK2P53438 785 aaPredicted RBP6.13□□□□□ -1.43
TRS20YBR254C SLP1Q12232 587 aa6.13□□□□□ -1.43
TRS20YBR254C TY4B-PA0A0B7P3V8 1104 aa6.12□□□□□ -1.43
TRS20YBR254C AI3P03877 415 aa6.12□□□□□ -1.43
TRS20YBR254C AIM46P38885 310 aa6.12□□□□□ -1.43
TRS20YBR254C TY4A-HQ6Q5P6 413 aa6.12□□□□□ -1.43
TRS20YBR254C YBR287WP38355 427 aa6.11□□□□□ -1.43
TRS20YBR254C NTA1P40354 457 aa6.11□□□□□ -1.43
TRS20YBR254C INP51P40559 946 aaKnown RBP6.11□□□□□ -1.43
TRS20YBR254C SAC7P17121 654 aa6.1□□□□□ -1.43
TRS20YBR254C RAD55P38953 406 aa6.1□□□□□ -1.43
TRS20YBR254C TIF6Q12522 245 aaKnown RBP6.1□□□□□ -1.43
TRS20YBR254C TFA2P36145 328 aa6.09□□□□□ -1.43
TRS20YBR254C BIO5P53744 561 aaKnown RBP6.09□□□□□ -1.43
TRS20YBR254C RPL34AP87262 121 aaPredicted RBP6.09□□□□□ -1.43
TRS20YBR254C SFA1P32771 386 aa6.08□□□□□ -1.44
TRS20YBR254C NRD1P53617 575 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44 RIP-Chip
TRS20YBR254C ALD3P54114 506 aa6.08□□□□□ -1.44
TRS20YBR254C SMC1P32908 1225 aa6.07□□□□□ -1.44
TRS20YBR254C ARI1P53111 347 aaKnown RBP6.07□□□□□ -1.44
TRS20YBR254C KAR5Q04746 504 aa6.07□□□□□ -1.44
TRS20YBR254C FUS1P11710 512 aa6.06□□□□□ -1.44
TRS20YBR254C PGM1P33401 570 aaKnown RBP6.06□□□□□ -1.44
TRS20YBR254C IRS4P36115 615 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms