RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W RAD2P07276 1031 aa8.28□□□□□ -1.08
SWD1YAR003W MRF1P30775 413 aaPredicted RBP8.28□□□□□ -1.08
SWD1YAR003W MDG1P53885 366 aa8.28□□□□□ -1.08
SWD1YAR003W BUD27P43573 796 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
SWD1YAR003W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
SWD1YAR003W COQ4O13525 335 aa8.26□□□□□ -1.09
SWD1YAR003W FPR3P38911 411 aaKnown RBP8.26□□□□□ -1.09
SWD1YAR003W YNR021WP53723 404 aaKnown RBP8.26□□□□□ -1.09
SWD1YAR003W TY1A-DR4O74302 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-HP0C2I4 478 aaKnown RBP8.25□□□□□ -1.09
SWD1YAR003W TY1A-AP0CX57 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-PR1P0CX58 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-ORP0CX59 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-PR2P0CX60 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-DR5P0CX65 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-ER2P0CX66 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-GR3P0CX67 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-LR1P0CX68 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-MR2P0CX69 440 aa8.25□□□□□ -1.09
SWD1YAR003W NPR2P39923 615 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-JR2P47099 440 aa8.25□□□□□ -1.09
SWD1YAR003W SRT1Q03175 343 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-DR1Q03856 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-ML1Q04706 440 aaKnown RBP8.25□□□□□ -1.09
SWD1YAR003W NOP8Q08287 484 aaPredicted RBP8.25□□□□□ -1.09
SWD1YAR003W TY1A-BRQ12217 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-NL2Q12470 440 aa8.25□□□□□ -1.09
SWD1YAR003W TY1A-GR2Q12485 440 aa8.25□□□□□ -1.09
SWD1YAR003W RAD4P14736 754 aa8.24□□□□□ -1.09
SWD1YAR003W DAL5P15365 543 aa8.24□□□□□ -1.09
SWD1YAR003W SEC2P17065 759 aa8.24□□□□□ -1.09
SWD1YAR003W SSP2Q08646 371 aa8.24□□□□□ -1.09
SWD1YAR003W FUN12P39730 1002 aaKnown RBP8.23□□□□□ -1.09
SWD1YAR003W ALD2P47771 506 aa8.23□□□□□ -1.09
SWD1YAR003W YOL057WQ08225 711 aa8.23□□□□□ -1.09
SWD1YAR003W BUG1Q12191 341 aa8.23□□□□□ -1.09
SWD1YAR003W KEX2P13134 814 aa8.22□□□□□ -1.09
SWD1YAR003W SDH2P21801 266 aa8.22□□□□□ -1.09
SWD1YAR003W ATF2P53296 535 aa8.22□□□□□ -1.09
SWD1YAR003W AMS1P22855 1083 aa8.21□□□□□ -1.1
SWD1YAR003W SPT16P32558 1035 aaKnown RBP8.21□□□□□ -1.1
SWD1YAR003W UGA2P38067 497 aa8.21□□□□□ -1.1
SWD1YAR003W YIL092WP40497 633 aa8.21□□□□□ -1.1
SWD1YAR003W DNM1P54861 757 aa8.21□□□□□ -1.1
SWD1YAR003W VPS64Q03944 604 aa8.21□□□□□ -1.1
SWD1YAR003W YEL077CQ3E7X8 1277 aa8.21□□□□□ -1.1
SWD1YAR003W RIM15P43565 1770 aa8.2□□□□□ -1.1
SWD1YAR003W SIT4P20604 311 aa8.2□□□□□ -1.1
SWD1YAR003W PAT1P25644 796 aaKnown RBP8.2□□□□□ -1.1
SWD1YAR003W YPP1P46951 817 aa8.2□□□□□ -1.1
SWD1YAR003W LYS4P49367 693 aaPredicted RBP8.2□□□□□ -1.1
SWD1YAR003W PHM7Q12252 991 aa8.2□□□□□ -1.1
SWD1YAR003W MRP7P12687 371 aa8.19□□□□□ -1.1
SWD1YAR003W NIS1P53939 407 aa8.19□□□□□ -1.1
SWD1YAR003W ERF2Q06551 359 aa8.19□□□□□ -1.1
SWD1YAR003W RAS1P01119 309 aa8.18□□□□□ -1.1
SWD1YAR003W ERG12P07277 443 aa8.18□□□□□ -1.1
SWD1YAR003W GLC3P32775 704 aa8.18□□□□□ -1.1
SWD1YAR003W SER1P33330 395 aaKnown RBP8.18□□□□□ -1.1
SWD1YAR003W YBL086CP38177 466 aa8.18□□□□□ -1.1
SWD1YAR003W CST6P40535 587 aa8.18□□□□□ -1.1
SWD1YAR003W YNL115CP53925 644 aa8.18□□□□□ -1.1
SWD1YAR003W ALD3P54114 506 aa8.18□□□□□ -1.1
SWD1YAR003W ZDS2P54786 942 aa8.18□□□□□ -1.1
SWD1YAR003W NUP133P36161 1157 aa8.17□□□□□ -1.1
SWD1YAR003W RRN7P40992 514 aa8.17□□□□□ -1.1
SWD1YAR003W UTP22P53254 1237 aaPredicted RBP8.17□□□□□ -1.1
SWD1YAR003W PKH1Q03407 766 aa8.17□□□□□ -1.1
SWD1YAR003W SSA2P10592 639 aaKnown RBP8.16□□□□□ -1.1
SWD1YAR003W YGL082WP53155 381 aa8.15□□□□□ -1.1
SWD1YAR003W HPC2Q01448 625 aa8.15□□□□□ -1.1
SWD1YAR003W CSI1Q04368 295 aa8.15□□□□□ -1.1
SWD1YAR003W YDR306CQ06640 478 aa8.15□□□□□ -1.1
SWD1YAR003W AIM7Q12156 149 aa8.15□□□□□ -1.1
SWD1YAR003W APL2P36000 726 aaPredicted RBP8.14□□□□□ -1.11
SWD1YAR003W FPK1P53739 893 aa8.14□□□□□ -1.11
SWD1YAR003W NYV1Q12255 253 aa8.14□□□□□ -1.11
SWD1YAR003W SWI1P09547 1314 aa8.13□□□□□ -1.11
SWD1YAR003W RPS19AP07280 144 aaKnown RBP8.13□□□□□ -1.11
SWD1YAR003W RPS19BP07281 144 aaPredicted RBP8.13□□□□□ -1.11
SWD1YAR003W LPD1P09624 499 aaKnown RBP8.13□□□□□ -1.11
SWD1YAR003W RAD24P32641 659 aa8.13□□□□□ -1.11
SWD1YAR003W YNG2P38806 282 aaKnown RBP8.13□□□□□ -1.11
SWD1YAR003W PUF6Q04373 656 aaKnown RBP8.13□□□□□ -1.11
SWD1YAR003W SUP35P05453 685 aaKnown RBP8.12□□□□□ -1.11
SWD1YAR003W POL32P47110 350 aa8.12□□□□□ -1.11
SWD1YAR003W CTH1P47976 325 aa8.12□□□□□ -1.11
SWD1YAR003W RAT1Q02792 1006 aaKnown RBP8.12□□□□□ -1.11
SWD1YAR003W YGR122WP53272 402 aa8.11□□□□□ -1.11
SWD1YAR003W YPR204WQ08995 1032 aa8.11□□□□□ -1.11
SWD1YAR003W ARG8P18544 423 aa8.1□□□□□ -1.11
SWD1YAR003W BOI2P39969 1040 aa8.1□□□□□ -1.11
SWD1YAR003W YJR008WP47085 338 aa8.1□□□□□ -1.11
SWD1YAR003W TUB4P53378 473 aa8.1□□□□□ -1.11
SWD1YAR003W SPO1P53541 631 aa8.1□□□□□ -1.11
SWD1YAR003W AGE1Q04412 482 aa8.1□□□□□ -1.11
SWD1YAR003W DIB1Q06819 143 aaPredicted RBP8.1□□□□□ -1.11
SWD1YAR003W CTI6Q08923 506 aa8.1□□□□□ -1.11
SWD1YAR003W SWC3P31376 625 aa8.09□□□□□ -1.11
SWD1YAR003W HGH1P48362 394 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 166.9 ms