RNA–Protein interactions for RNA: ENST00000636834.1

CACNB4-237, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-237ENST00000636834 FOXD1Q16676 465 aa8.37□□□□□ -1.07
CACNB4-237ENST00000636834 PTMAP06454 111 aaKnown RBP8.37□□□□□ -1.07
CACNB4-237ENST00000636834 ADAMTS7Q9UKP4 1686 aa8.36□□□□□ -1.07
CACNB4-237ENST00000636834 ANO8Q9HCE9 1232 aaPredicted RBP8.36□□□□□ -1.07
CACNB4-237ENST00000636834 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.36□□□□□ -1.07
CACNB4-237ENST00000636834 CHMP7Q8WUX9 453 aaPredicted RBP8.36□□□□□ -1.07
CACNB4-237ENST00000636834 BRD4O60885 1362 aaPredicted RBP8.35□□□□□ -1.07
CACNB4-237ENST00000636834 ITSN1Q15811 1721 aa8.34□□□□□ -1.07
CACNB4-237ENST00000636834 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.07
CACNB4-237ENST00000636834 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
CACNB4-237ENST00000636834 ALKQ9UM73 1620 aa8.34□□□□□ -1.07
CACNB4-237ENST00000636834 SIPA1L3O60292 1781 aaPredicted RBP8.34□□□□□ -1.07
CACNB4-237ENST00000636834 WASHC2CQ9Y4E1 1318 aa8.33□□□□□ -1.08
CACNB4-237ENST00000636834 DIP2AQ14689 1571 aa8.33□□□□□ -1.08
CACNB4-237ENST00000636834 PNISRQ8TF01 805 aaKnown RBP8.33□□□□□ -1.08
CACNB4-237ENST00000636834 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
CACNB4-237ENST00000636834 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
CACNB4-237ENST00000636834 TRMT2AQ8IZ69 625 aaKnown RBP8.33□□□□□ -1.08
CACNB4-237ENST00000636834 PKNOX2Q96KN3 472 aa8.32□□□□□ -1.08
CACNB4-237ENST00000636834 TCERG1O14776 1098 aaKnown RBP8.32□□□□□ -1.08
CACNB4-237ENST00000636834 MAP2P11137 1827 aaKnown RBP8.32□□□□□ -1.08
CACNB4-237ENST00000636834 RGS3P49796 1198 aa8.31□□□□□ -1.08
CACNB4-237ENST00000636834 PKD2Q13563 968 aa8.3□□□□□ -1.08
CACNB4-237ENST00000636834 HNRNPMP52272 730 aaKnown RBP eCLIP8.3□□□□□ -1.089e-6■■■■□ 22.2
CACNB4-237ENST00000636834 PHF23Q9BUL5 403 aaPredicted RBP8.3□□□□□ -1.08
CACNB4-237ENST00000636834 TECPR2O15040 1411 aa8.3□□□□□ -1.08
CACNB4-237ENST00000636834 RGPD8O14715 1765 aaPredicted RBP8.3□□□□□ -1.08
CACNB4-237ENST00000636834 LMO7Q8WWI1 1683 aa8.3□□□□□ -1.08
CACNB4-237ENST00000636834 GSE1Q14687 1217 aa8.3□□□□□ -1.08
CACNB4-237ENST00000636834 FER1L4A9Z1Z3 1794 aa8.29□□□□□ -1.08
CACNB4-237ENST00000636834 CFAP65Q6ZU64 1925 aaKnown RBP8.29□□□□□ -1.08
CACNB4-237ENST00000636834 SENP3-EIF4A1A0A087X0R7 540 aa8.29□□□□□ -1.08
CACNB4-237ENST00000636834 CHIC2Q9UKJ5 165 aa8.29□□□□□ -1.08
CACNB4-237ENST00000636834 CHD2O14647 1828 aaKnown RBP8.28□□□□□ -1.08
CACNB4-237ENST00000636834 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
CACNB4-237ENST00000636834 PIK3C2AO00443 1686 aa8.28□□□□□ -1.08
CACNB4-237ENST00000636834 KANK1Q14678 1352 aa8.27□□□□□ -1.08
CACNB4-237ENST00000636834 STAC3Q96MF2 364 aa8.27□□□□□ -1.09
CACNB4-237ENST00000636834 PLEKHD1A6NEE1 506 aa8.27□□□□□ -1.09
CACNB4-237ENST00000636834 GOLGA6L3A6NEY3 463 aa8.27□□□□□ -1.09
CACNB4-237ENST00000636834 YEATS2Q9ULM3 1422 aa8.26□□□□□ -1.09
CACNB4-237ENST00000636834 SLIT1O75093 1534 aa8.26□□□□□ -1.09
CACNB4-237ENST00000636834 CHAF1AQ13111 956 aaPredicted RBP8.25□□□□□ -1.09
CACNB4-237ENST00000636834 MED1Q15648 1581 aaPredicted RBP8.25□□□□□ -1.09
CACNB4-237ENST00000636834 TRPM3Q9HCF6 1732 aaPredicted RBP8.25□□□□□ -1.09
CACNB4-237ENST00000636834 ARHGAP23Q9P227 1491 aa8.25□□□□□ -1.09
CACNB4-237ENST00000636834 ADAMTSL3P82987 1691 aa8.25□□□□□ -1.09
CACNB4-237ENST00000636834 FAM208AQ9UK61 1670 aaKnown RBP8.24□□□□□ -1.09
CACNB4-237ENST00000636834 XIRP1Q702N8 1843 aaKnown RBP8.24□□□□□ -1.09
CACNB4-237ENST00000636834 ARID3AQ99856 593 aa8.24□□□□□ -1.09
CACNB4-237ENST00000636834 A2ML1A8K2U0 1454 aa8.24□□□□□ -1.09
CACNB4-237ENST00000636834 NCBP3Q53F19 620 aaKnown RBP8.24□□□□□ -1.09
CACNB4-237ENST00000636834 GZF1Q9H116 711 aaPredicted RBP8.24□□□□□ -1.09
CACNB4-237ENST00000636834 NWD1Q149M9 1564 aa8.23□□□□□ -1.09
CACNB4-237ENST00000636834 TSPOAP1O95153 1857 aa8.23□□□□□ -1.09
CACNB4-237ENST00000636834 HSP90AB1P08238 724 aaKnown RBP8.23□□□□□ -1.09
CACNB4-237ENST00000636834 NBPF1Q3BBV0 1214 aa8.23□□□□□ -1.09
CACNB4-237ENST00000636834 PUS7Q96PZ0 661 aaKnown RBP8.23□□□□□ -1.09
CACNB4-237ENST00000636834 GLI3P10071 1580 aa8.23□□□□□ -1.09
CACNB4-237ENST00000636834 HSCBQ8IWL3 235 aa8.22□□□□□ -1.09
CACNB4-237ENST00000636834 MYH16Q9H6N6 1097 aa8.22□□□□□ -1.09
CACNB4-237ENST00000636834 PODXL2Q9NZ53 605 aa8.22□□□□□ -1.09
CACNB4-237ENST00000636834 SLKQ9H2G2 1235 aaPredicted RBP8.22□□□□□ -1.09
CACNB4-237ENST00000636834 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
CACNB4-237ENST00000636834 KDM3BQ7LBC6 1761 aa8.22□□□□□ -1.09
CACNB4-237ENST00000636834 LMTK3Q96Q04 1460 aa8.21□□□□□ -1.09
CACNB4-237ENST00000636834 IL27Q8NEV9 243 aa8.21□□□□□ -1.09
CACNB4-237ENST00000636834 SSH2Q76I76 1423 aa8.21□□□□□ -1.1
CACNB4-237ENST00000636834 PLEKHH1Q9ULM0 1364 aa8.2□□□□□ -1.1
CACNB4-237ENST00000636834 PLCB2Q00722 1185 aa8.2□□□□□ -1.1
CACNB4-237ENST00000636834 CD109Q6YHK3 1445 aa8.2□□□□□ -1.1
CACNB4-237ENST00000636834 MSH5O43196 834 aa8.2□□□□□ -1.1
CACNB4-237ENST00000636834 PTMSP20962 102 aa8.2□□□□□ -1.1
CACNB4-237ENST00000636834 GBP4Q96PP9 640 aa8.2□□□□□ -1.1
CACNB4-237ENST00000636834 MYBBP1AQ9BQG0 1328 aaKnown RBP8.2□□□□□ -1.1
CACNB4-237ENST00000636834 POLR3AO14802 1390 aaPredicted RBP8.19□□□□□ -1.1
CACNB4-237ENST00000636834 CPSF1Q10570 1443 aaKnown RBP8.19□□□□□ -1.1
CACNB4-237ENST00000636834 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
CACNB4-237ENST00000636834 STRCP1A6NGW2 1772 aa8.19□□□□□ -1.1
CACNB4-237ENST00000636834 TNNT3P45378 269 aaPredicted RBP8.19□□□□□ -1.1
CACNB4-237ENST00000636834 KDM2BQ8NHM5 1336 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 CACNA1FO60840 1977 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 NUDCQ9Y266 331 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 PPIP5K1Q6PFW1 1433 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 PDE4AP27815 886 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 YTHDC2Q9H6S0 1430 aaKnown RBP8.18□□□□□ -1.1
CACNB4-237ENST00000636834 A0A0U1RQG5 324 aaPredicted RBP8.18□□□□□ -1.1
CACNB4-237ENST00000636834 KIAA2012Q0VF49 1180 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 RCAN3Q9UKA8 241 aa8.18□□□□□ -1.1
CACNB4-237ENST00000636834 ST20-MTHFSA0A0A6YYL1 179 aa8.17□□□□□ -1.1
CACNB4-237ENST00000636834 ZNF777Q9ULD5 760 aaPredicted RBP8.17□□□□□ -1.1
CACNB4-237ENST00000636834 SHANK3Q9BYB0 1731 aa8.17□□□□□ -1.1
CACNB4-237ENST00000636834 CDK12Q9NYV4 1490 aaPredicted RBP8.17□□□□□ -1.1
CACNB4-237ENST00000636834 DDX60Q8IY21 1712 aaKnown RBP8.16□□□□□ -1.1
CACNB4-237ENST00000636834 ARID3CA6NKF2 412 aa8.16□□□□□ -1.1
CACNB4-237ENST00000636834 LTN1O94822 1766 aa8.16□□□□□ -1.1
CACNB4-237ENST00000636834 COL18A1P39060 1754 aa8.16□□□□□ -1.1
CACNB4-237ENST00000636834 UBE2Q2Q8WVN8 375 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms