RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
RAB28P4-201ENST00000622233 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
RAB28P4-201ENST00000622233 PCDHB15Q9Y5E8 787 aa11.91□□□□□ -0.5
RAB28P4-201ENST00000622233 HOXA2O43364 376 aa11.9□□□□□ -0.5
RAB28P4-201ENST00000622233 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
RAB28P4-201ENST00000622233 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
RAB28P4-201ENST00000622233 WNT2BQ93097 391 aa11.9□□□□□ -0.5
RAB28P4-201ENST00000622233 SPTLC1O15269 473 aa11.89□□□□□ -0.51
RAB28P4-201ENST00000622233 FUT2Q10981 343 aa11.89□□□□□ -0.51
RAB28P4-201ENST00000622233 CUX1P39880 1505 aa11.89□□□□□ -0.51
RAB28P4-201ENST00000622233 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
RAB28P4-201ENST00000622233 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
RAB28P4-201ENST00000622233 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
RAB28P4-201ENST00000622233 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
RAB28P4-201ENST00000622233 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
RAB28P4-201ENST00000622233 QPCTQ16769 361 aa11.87□□□□□ -0.51
RAB28P4-201ENST00000622233 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
RAB28P4-201ENST00000622233 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
RAB28P4-201ENST00000622233 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
RAB28P4-201ENST00000622233 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
RAB28P4-201ENST00000622233 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
RAB28P4-201ENST00000622233 FDX1P10109 184 aa11.84□□□□□ -0.51
RAB28P4-201ENST00000622233 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
RAB28P4-201ENST00000622233 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
RAB28P4-201ENST00000622233 APLP1P51693 650 aa11.83□□□□□ -0.52
RAB28P4-201ENST00000622233 PPP4CP60510 307 aa11.83□□□□□ -0.52
RAB28P4-201ENST00000622233 USP46P62068 366 aa11.83□□□□□ -0.52
RAB28P4-201ENST00000622233 KCTD12Q96CX2 325 aaKnown RBP11.83□□□□□ -0.52
RAB28P4-201ENST00000622233 EIF4G3O43432 1585 aaKnown RBP11.83□□□□□ -0.52
RAB28P4-201ENST00000622233 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
RAB28P4-201ENST00000622233 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
RAB28P4-201ENST00000622233 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
RAB28P4-201ENST00000622233 ZNF608Q9ULD9 1512 aaPredicted RBP11.81□□□□□ -0.52
RAB28P4-201ENST00000622233 RFC5P40937 340 aa11.81□□□□□ -0.52
RAB28P4-201ENST00000622233 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
RAB28P4-201ENST00000622233 TSR3Q9UJK0 312 aaKnown RBP11.81□□□□□ -0.52
RAB28P4-201ENST00000622233 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
RAB28P4-201ENST00000622233 SYNJ1O43426 1573 aa11.8□□□□□ -0.52
RAB28P4-201ENST00000622233 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
RAB28P4-201ENST00000622233 LILRB3O75022 631 aa11.8□□□□□ -0.52
RAB28P4-201ENST00000622233 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
RAB28P4-201ENST00000622233 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
RAB28P4-201ENST00000622233 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
RAB28P4-201ENST00000622233 SYMPKQ92797 1274 aaKnown RBP11.79□□□□□ -0.52
RAB28P4-201ENST00000622233 HRCP23327 699 aa11.78□□□□□ -0.52
RAB28P4-201ENST00000622233 GJA5P36382 358 aa11.78□□□□□ -0.52
RAB28P4-201ENST00000622233 MORN1Q5T089 497 aa11.78□□□□□ -0.52
RAB28P4-201ENST00000622233 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
RAB28P4-201ENST00000622233 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
RAB28P4-201ENST00000622233 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.52
RAB28P4-201ENST00000622233 NUTM2BA6NNL0 878 aaPredicted RBP11.77□□□□□ -0.53
RAB28P4-201ENST00000622233 NUTM2EB1AL46 878 aaPredicted RBP11.77□□□□□ -0.53
RAB28P4-201ENST00000622233 NUTM2DQ5VT03 806 aaPredicted RBP11.77□□□□□ -0.53
RAB28P4-201ENST00000622233 NUTM2AQ8IVF1 878 aaPredicted RBP11.77□□□□□ -0.53
RAB28P4-201ENST00000622233 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
RAB28P4-201ENST00000622233 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
RAB28P4-201ENST00000622233 SOGA1O94964 1423 aa11.75□□□□□ -0.53
RAB28P4-201ENST00000622233 PTPN5P54829 565 aa11.74□□□□□ -0.53
RAB28P4-201ENST00000622233 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
RAB28P4-201ENST00000622233 ZBTB3Q9H5J0 574 aa11.74□□□□□ -0.53
RAB28P4-201ENST00000622233 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
RAB28P4-201ENST00000622233 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
RAB28P4-201ENST00000622233 MCM6Q14566 821 aa11.73□□□□□ -0.53
RAB28P4-201ENST00000622233 BLOC1S3Q6QNY0 202 aa11.73□□□□□ -0.53
RAB28P4-201ENST00000622233 ABCA10Q8WWZ4 1543 aa11.73□□□□□ -0.53
RAB28P4-201ENST00000622233 ABCA5Q8WWZ7 1642 aa11.73□□□□□ -0.53
RAB28P4-201ENST00000622233 PBRM1Q86U86 1689 aa11.72□□□□□ -0.53
RAB28P4-201ENST00000622233 MTMR2Q13614 643 aa11.72□□□□□ -0.53
RAB28P4-201ENST00000622233 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
RAB28P4-201ENST00000622233 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
RAB28P4-201ENST00000622233 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
RAB28P4-201ENST00000622233 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAB28P4-201ENST00000622233 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
RAB28P4-201ENST00000622233 AP1G2O75843 785 aa11.71□□□□□ -0.53
RAB28P4-201ENST00000622233 CHD1O14646 1710 aa11.7□□□□□ -0.54
RAB28P4-201ENST00000622233 FLIIQ13045 1269 aa11.7□□□□□ -0.54
RAB28P4-201ENST00000622233 PRR14Q9BWN1 585 aa11.7□□□□□ -0.54
RAB28P4-201ENST00000622233 COPS2P61201 443 aa11.69□□□□□ -0.54
RAB28P4-201ENST00000622233 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
RAB28P4-201ENST00000622233 TSC1Q92574 1164 aa11.69□□□□□ -0.54
RAB28P4-201ENST00000622233 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
RAB28P4-201ENST00000622233 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
RAB28P4-201ENST00000622233 CLUAP1Q96AJ1 413 aa11.68□□□□□ -0.54
RAB28P4-201ENST00000622233 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
RAB28P4-201ENST00000622233 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
RAB28P4-201ENST00000622233 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
RAB28P4-201ENST00000622233 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
RAB28P4-201ENST00000622233 POM121Q96HA1 1249 aa11.66□□□□□ -0.54
RAB28P4-201ENST00000622233 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
RAB28P4-201ENST00000622233 MTMR14Q8NCE2 650 aa11.65□□□□□ -0.54
RAB28P4-201ENST00000622233 BANK1Q8NDB2 785 aa11.65□□□□□ -0.54
RAB28P4-201ENST00000622233 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
RAB28P4-201ENST00000622233 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
RAB28P4-201ENST00000622233 GRIN2BQ13224 1484 aa11.64□□□□□ -0.55
RAB28P4-201ENST00000622233 GAPVD1Q14C86 1478 aa11.64□□□□□ -0.55
RAB28P4-201ENST00000622233 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
RAB28P4-201ENST00000622233 MAGI1Q96QZ7 1491 aaPredicted RBP11.64□□□□□ -0.55
RAB28P4-201ENST00000622233 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
RAB28P4-201ENST00000622233 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
RAB28P4-201ENST00000622233 SPDYE5A6NIY4 337 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms