RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 MRPL50Q8N5N7 158 aaKnown RBP10.77□□□□□ -0.69
TTC39C-208ENST00000584095 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
TTC39C-208ENST00000584095 ATP6V1AP38606 617 aa10.76□□□□□ -0.69
TTC39C-208ENST00000584095 ABL2P42684 1182 aa10.76□□□□□ -0.69
TTC39C-208ENST00000584095 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
TTC39C-208ENST00000584095 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
TTC39C-208ENST00000584095 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
TTC39C-208ENST00000584095 PLSCR2Q9NRY7 297 aa10.76□□□□□ -0.69
TTC39C-208ENST00000584095 C6orf229H3BNL8 230 aa10.75□□□□□ -0.69
TTC39C-208ENST00000584095 HRO43593 1189 aa10.74□□□□□ -0.69
TTC39C-208ENST00000584095 KMT5BQ4FZB7 885 aa10.74□□□□□ -0.69
TTC39C-208ENST00000584095 LCE2DQ5TA82 110 aaPredicted RBP10.74□□□□□ -0.69
TTC39C-208ENST00000584095 SYMPKQ92797 1274 aaKnown RBP10.74□□□□□ -0.69
TTC39C-208ENST00000584095 LRCH3Q96II8 777 aa10.74□□□□□ -0.69
TTC39C-208ENST00000584095 PRM3Q9NNZ6 103 aa10.74□□□□□ -0.69
TTC39C-208ENST00000584095 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
TTC39C-208ENST00000584095 TSC1Q92574 1164 aa10.73□□□□□ -0.69
TTC39C-208ENST00000584095 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
TTC39C-208ENST00000584095 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
TTC39C-208ENST00000584095 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
TTC39C-208ENST00000584095 GPR37L1O60883 481 aa10.72□□□□□ -0.69
TTC39C-208ENST00000584095 MORN1Q5T089 497 aa10.72□□□□□ -0.69
TTC39C-208ENST00000584095 WWC1Q8IX03 1113 aa10.72□□□□□ -0.69
TTC39C-208ENST00000584095 LRRN4Q8WUT4 740 aa10.72□□□□□ -0.69
TTC39C-208ENST00000584095 CCDC97Q96F63 343 aaPredicted RBP10.72□□□□□ -0.69
TTC39C-208ENST00000584095 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
TTC39C-208ENST00000584095 SERPINA10Q9UK55 444 aa10.72□□□□□ -0.69
TTC39C-208ENST00000584095 POM121CA8CG34 1229 aa10.71□□□□□ -0.69
TTC39C-208ENST00000584095 IRF5Q13568 498 aa10.71□□□□□ -0.69
TTC39C-208ENST00000584095 PUS10Q3MIT2 529 aaKnown RBP10.71□□□□□ -0.69
TTC39C-208ENST00000584095 PRR7Q8TB68 274 aa10.7□□□□□ -0.7
TTC39C-208ENST00000584095 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
TTC39C-208ENST00000584095 SLC27A5Q9Y2P5 690 aa10.69□□□□□ -0.7
TTC39C-208ENST00000584095 RETREG3Q86VR2 466 aa10.67□□□□□ -0.7
TTC39C-208ENST00000584095 ANKK1Q8NFD2 765 aa10.67□□□□□ -0.7
TTC39C-208ENST00000584095 EPS8L1Q8TE68 723 aa10.67□□□□□ -0.7
TTC39C-208ENST00000584095 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
TTC39C-208ENST00000584095 GLMNQ92990 594 aa10.66□□□□□ -0.7
TTC39C-208ENST00000584095 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
TTC39C-208ENST00000584095 BCAMP50895 628 aa10.65□□□□□ -0.7
TTC39C-208ENST00000584095 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
TTC39C-208ENST00000584095 PRR14Q9BWN1 585 aa10.65□□□□□ -0.7
TTC39C-208ENST00000584095 HPS5Q9UPZ3 1129 aa10.65□□□□□ -0.7
TTC39C-208ENST00000584095 Q3C1V9 767 aa10.64□□□□□ -0.71
TTC39C-208ENST00000584095 BLOC1S3Q6QNY0 202 aa10.64□□□□□ -0.71
TTC39C-208ENST00000584095 ANKRD13DQ6ZTN6 518 aa10.64□□□□□ -0.71
TTC39C-208ENST00000584095 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
TTC39C-208ENST00000584095 GOLGA8CPA6NN73 597 aa10.63□□□□□ -0.71
TTC39C-208ENST00000584095 APLP1P51693 650 aa10.63□□□□□ -0.71
TTC39C-208ENST00000584095 PPP4CP60510 307 aa10.62□□□□□ -0.71
TTC39C-208ENST00000584095 NR6A1Q15406 480 aa10.62□□□□□ -0.71
TTC39C-208ENST00000584095 ADAMTS19Q8TE59 1207 aa10.62□□□□□ -0.71
TTC39C-208ENST00000584095 WASHC4Q2M389 1173 aa10.61□□□□□ -0.71
TTC39C-208ENST00000584095 DESI1Q6ICB0 168 aa10.61□□□□□ -0.71
TTC39C-208ENST00000584095 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
TTC39C-208ENST00000584095 TSR3Q9UJK0 312 aaKnown RBP10.61□□□□□ -0.71
TTC39C-208ENST00000584095 VAC14Q08AM6 782 aa10.6□□□□□ -0.71
TTC39C-208ENST00000584095 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
TTC39C-208ENST00000584095 WNT2BQ93097 391 aa10.6□□□□□ -0.71
TTC39C-208ENST00000584095 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
TTC39C-208ENST00000584095 THAP11Q96EK4 314 aa10.58□□□□□ -0.72
TTC39C-208ENST00000584095 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
TTC39C-208ENST00000584095 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
TTC39C-208ENST00000584095 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
TTC39C-208ENST00000584095 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
TTC39C-208ENST00000584095 SCUBE3Q8IX30 993 aa10.57□□□□□ -0.72
TTC39C-208ENST00000584095 NR1I2O75469 434 aa10.55□□□□□ -0.72
TTC39C-208ENST00000584095 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-208ENST00000584095 TRIM26Q12899 539 aaPredicted RBP10.55□□□□□ -0.72
TTC39C-208ENST00000584095 WBP1LQ9NX94 342 aa10.55□□□□□ -0.72
TTC39C-208ENST00000584095 PDIA4P13667 645 aaKnown RBP10.54□□□□□ -0.72
TTC39C-208ENST00000584095 ALG2Q9H553 416 aa10.54□□□□□ -0.72
TTC39C-208ENST00000584095 KRTAP3-3Q9BYR6 98 aa10.53□□□□□ -0.72
TTC39C-208ENST00000584095 KRTAP3-2Q9BYR7 98 aa10.53□□□□□ -0.72
TTC39C-208ENST00000584095 F12P00748 615 aaPredicted RBP10.52□□□□□ -0.73
TTC39C-208ENST00000584095 JUNDP17535 347 aa10.52□□□□□ -0.73
TTC39C-208ENST00000584095 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
TTC39C-208ENST00000584095 PODXL2Q9NZ53 605 aa10.5□□□□□ -0.73
TTC39C-208ENST00000584095 MAP10Q9P2G4 905 aa10.5□□□□□ -0.73
TTC39C-208ENST00000584095 PPP1R15AO75807 674 aaPredicted RBP10.49□□□□□ -0.73
TTC39C-208ENST00000584095 PTPRNQ16849 979 aa10.49□□□□□ -0.73
TTC39C-208ENST00000584095 CFAP70Q5T0N1 1121 aa10.49□□□□□ -0.73
TTC39C-208ENST00000584095 RETREG2Q8NC44 543 aa10.49□□□□□ -0.73
TTC39C-208ENST00000584095 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
TTC39C-208ENST00000584095 UCN2Q96RP3 112 aa10.49□□□□□ -0.73
TTC39C-208ENST00000584095 SOX11P35716 441 aa10.48□□□□□ -0.73
TTC39C-208ENST00000584095 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
TTC39C-208ENST00000584095 FAM160A2Q8N612 972 aaPredicted RBP10.48□□□□□ -0.73
TTC39C-208ENST00000584095 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
TTC39C-208ENST00000584095 FKBPLQ9UIM3 349 aa10.48□□□□□ -0.73
TTC39C-208ENST00000584095 COPS2P61201 443 aa10.47□□□□□ -0.73
TTC39C-208ENST00000584095 TRAIPQ9BWF2 469 aa10.47□□□□□ -0.73
TTC39C-208ENST00000584095 DXOO77932 396 aaKnown RBP10.46□□□□□ -0.73
TTC39C-208ENST00000584095 FBXO45P0C2W1 286 aa10.46□□□□□ -0.73
TTC39C-208ENST00000584095 NR1H3Q13133 447 aa10.46□□□□□ -0.73
TTC39C-208ENST00000584095 SPSB2Q99619 263 aa10.46□□□□□ -0.73
TTC39C-208ENST00000584095 PRDM9Q9NQV7 894 aa10.46□□□□□ -0.73
TTC39C-208ENST00000584095 RFX1P22670 979 aa10.45□□□□□ -0.74
TTC39C-208ENST00000584095 SEMA3FQ13275 785 aa10.45□□□□□ -0.74
TTC39C-208ENST00000584095 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms