RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
TTC39C-208ENST00000584095 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
TTC39C-208ENST00000584095 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
TTC39C-208ENST00000584095 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
TTC39C-208ENST00000584095 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
TTC39C-208ENST00000584095 FOXD1Q16676 465 aa19.06■□□□□ 0.64
TTC39C-208ENST00000584095 ADRA2BP18089 450 aa18.82■□□□□ 0.6
TTC39C-208ENST00000584095 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
TTC39C-208ENST00000584095 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
TTC39C-208ENST00000584095 KCNA4P22459 653 aa18.03■□□□□ 0.48
TTC39C-208ENST00000584095 PPP4R3CPQ6ZMV5 832 aa17.75■□□□□ 0.43
TTC39C-208ENST00000584095 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
TTC39C-208ENST00000584095 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
TTC39C-208ENST00000584095 MSH5O43196 834 aa17.28■□□□□ 0.36
TTC39C-208ENST00000584095 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
TTC39C-208ENST00000584095 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
TTC39C-208ENST00000584095 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
TTC39C-208ENST00000584095 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
TTC39C-208ENST00000584095 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
TTC39C-208ENST00000584095 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
TTC39C-208ENST00000584095 ZBTB22O15209 634 aa16.65■□□□□ 0.26
TTC39C-208ENST00000584095 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
TTC39C-208ENST00000584095 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
TTC39C-208ENST00000584095 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
TTC39C-208ENST00000584095 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
TTC39C-208ENST00000584095 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
TTC39C-208ENST00000584095 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
TTC39C-208ENST00000584095 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
TTC39C-208ENST00000584095 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
TTC39C-208ENST00000584095 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
TTC39C-208ENST00000584095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
TTC39C-208ENST00000584095 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
TTC39C-208ENST00000584095 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
TTC39C-208ENST00000584095 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
TTC39C-208ENST00000584095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
TTC39C-208ENST00000584095 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
TTC39C-208ENST00000584095 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
TTC39C-208ENST00000584095 FKBP8Q14318 412 aa15.3■□□□□ 0.04
TTC39C-208ENST00000584095 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
TTC39C-208ENST00000584095 APLP2Q06481 763 aa15.08■□□□□ 0
TTC39C-208ENST00000584095 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
TTC39C-208ENST00000584095 AMER1Q5JTC6 1135 aaPredicted RBP14.95□□□□□ -0.02
TTC39C-208ENST00000584095 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
TTC39C-208ENST00000584095 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
TTC39C-208ENST00000584095 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
TTC39C-208ENST00000584095 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
TTC39C-208ENST00000584095 CAPN15O75808 1086 aa14.75□□□□□ -0.05
TTC39C-208ENST00000584095 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
TTC39C-208ENST00000584095 POLA2Q14181 598 aa14.72□□□□□ -0.05
TTC39C-208ENST00000584095 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
TTC39C-208ENST00000584095 FBLN2P98095 1184 aa14.68□□□□□ -0.06
TTC39C-208ENST00000584095 PROM2Q8N271 834 aa14.6□□□□□ -0.07
TTC39C-208ENST00000584095 ABCB7O75027 752 aa14.56□□□□□ -0.08
TTC39C-208ENST00000584095 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
TTC39C-208ENST00000584095 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
TTC39C-208ENST00000584095 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
TTC39C-208ENST00000584095 DSG3P32926 999 aa14.39□□□□□ -0.11
TTC39C-208ENST00000584095 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
TTC39C-208ENST00000584095 IFNLR1Q8IU57 520 aaPredicted RBP14.25□□□□□ -0.13
TTC39C-208ENST00000584095 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
TTC39C-208ENST00000584095 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
TTC39C-208ENST00000584095 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
TTC39C-208ENST00000584095 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
TTC39C-208ENST00000584095 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
TTC39C-208ENST00000584095 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
TTC39C-208ENST00000584095 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
TTC39C-208ENST00000584095 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
TTC39C-208ENST00000584095 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
TTC39C-208ENST00000584095 PKD2Q13563 968 aa14.01□□□□□ -0.17
TTC39C-208ENST00000584095 KLHL34Q8N239 644 aa13.96□□□□□ -0.17
TTC39C-208ENST00000584095 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
TTC39C-208ENST00000584095 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
TTC39C-208ENST00000584095 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
TTC39C-208ENST00000584095 MIER1Q8N108 512 aa13.86□□□□□ -0.19
TTC39C-208ENST00000584095 PLCB2Q00722 1185 aa13.83□□□□□ -0.2
TTC39C-208ENST00000584095 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
TTC39C-208ENST00000584095 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
TTC39C-208ENST00000584095 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
TTC39C-208ENST00000584095 RGL2O15211 777 aa13.66□□□□□ -0.22
TTC39C-208ENST00000584095 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
TTC39C-208ENST00000584095 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
TTC39C-208ENST00000584095 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
TTC39C-208ENST00000584095 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
TTC39C-208ENST00000584095 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
TTC39C-208ENST00000584095 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
TTC39C-208ENST00000584095 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
TTC39C-208ENST00000584095 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
TTC39C-208ENST00000584095 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
TTC39C-208ENST00000584095 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
TTC39C-208ENST00000584095 NUBP1P53384 320 aa13.5□□□□□ -0.25
TTC39C-208ENST00000584095 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
TTC39C-208ENST00000584095 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
TTC39C-208ENST00000584095 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
TTC39C-208ENST00000584095 PAXIP1Q6ZW49 1069 aaPredicted RBP13.46□□□□□ -0.25
TTC39C-208ENST00000584095 GSE1Q14687 1217 aa13.45□□□□□ -0.26
TTC39C-208ENST00000584095 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
TTC39C-208ENST00000584095 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
TTC39C-208ENST00000584095 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
TTC39C-208ENST00000584095 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
TTC39C-208ENST00000584095 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms