RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 SNAPC4Q5SXM2 1469 aa8.45□□□□□ -1.06
NCBP3-202ENST00000572988 GRIN2BQ13224 1484 aa8.44□□□□□ -1.06
NCBP3-202ENST00000572988 Q6ZNB5 142 aa8.43□□□□□ -1.06
NCBP3-202ENST00000572988 GAPVD1Q14C86 1478 aa8.43□□□□□ -1.06
NCBP3-202ENST00000572988 AMHR2Q16671 573 aa8.42□□□□□ -1.06
NCBP3-202ENST00000572988 ARAP1Q96P48 1450 aa8.41□□□□□ -1.06
NCBP3-202ENST00000572988 PDE4DQ08499 809 aa8.41□□□□□ -1.06
NCBP3-202ENST00000572988 REPIN1Q9BWE0 567 aaKnown RBP8.41□□□□□ -1.06
NCBP3-202ENST00000572988 PCDHB3Q9Y5E6 796 aa8.41□□□□□ -1.06
NCBP3-202ENST00000572988 WRNQ14191 1432 aaPredicted RBP eCLIP8.4□□□□□ -1.06
NCBP3-202ENST00000572988 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
NCBP3-202ENST00000572988 SSTR3P32745 418 aaPredicted RBP8.4□□□□□ -1.06
NCBP3-202ENST00000572988 COPS2P61201 443 aa8.4□□□□□ -1.06
NCBP3-202ENST00000572988 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.06
NCBP3-202ENST00000572988 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
NCBP3-202ENST00000572988 SYNJ2O15056 1496 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 MAGI1Q96QZ7 1491 aaPredicted RBP8.39□□□□□ -1.07
NCBP3-202ENST00000572988 CD46P15529 392 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 GCGRP47871 477 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 TJAP1Q5JTD0 557 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 MTRQ99707 1265 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 CHD1O14646 1710 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 ABCA10Q8WWZ4 1543 aa8.39□□□□□ -1.07
NCBP3-202ENST00000572988 PARP9Q8IXQ6 854 aa8.38□□□□□ -1.07
NCBP3-202ENST00000572988 LCE2BO14633 110 aa8.37□□□□□ -1.07
NCBP3-202ENST00000572988 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
NCBP3-202ENST00000572988 BLOC1S3Q6QNY0 202 aa8.37□□□□□ -1.07
NCBP3-202ENST00000572988 NUTM1Q86Y26 1132 aa8.37□□□□□ -1.07
NCBP3-202ENST00000572988 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
NCBP3-202ENST00000572988 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
NCBP3-202ENST00000572988 FUT2Q10981 343 aa8.36□□□□□ -1.07
NCBP3-202ENST00000572988 CLASP1Q7Z460 1538 aa8.35□□□□□ -1.07
NCBP3-202ENST00000572988 KDM4AO75164 1064 aa8.35□□□□□ -1.07
NCBP3-202ENST00000572988 ATP6V1AP38606 617 aa8.35□□□□□ -1.07
NCBP3-202ENST00000572988 GRIPAP1Q4V328 841 aa8.35□□□□□ -1.07
NCBP3-202ENST00000572988 ZNF516Q92618 1163 aa8.35□□□□□ -1.07
NCBP3-202ENST00000572988 WDR97A6NE52 1622 aa8.34□□□□□ -1.07
NCBP3-202ENST00000572988 GFRA3O60609 400 aa8.34□□□□□ -1.07
NCBP3-202ENST00000572988 NR1I2O75469 434 aa8.34□□□□□ -1.07
NCBP3-202ENST00000572988 BEGAINQ9BUH8 593 aa8.34□□□□□ -1.07
NCBP3-202ENST00000572988 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
NCBP3-202ENST00000572988 PPP1R18Q6NYC8 613 aa8.33□□□□□ -1.08
NCBP3-202ENST00000572988 FHAD1B1AJZ9 1412 aa8.32□□□□□ -1.08
NCBP3-202ENST00000572988 ZPR1O75312 459 aa8.32□□□□□ -1.08
NCBP3-202ENST00000572988 MS4A1P11836 297 aa8.32□□□□□ -1.08
NCBP3-202ENST00000572988 PRKD2Q9BZL6 878 aa8.32□□□□□ -1.08
NCBP3-202ENST00000572988 GRIN2AQ12879 1464 aa8.32□□□□□ -1.08
NCBP3-202ENST00000572988 USP46P62068 366 aa8.31□□□□□ -1.08
NCBP3-202ENST00000572988 SCUBE3Q8IX30 993 aa8.31□□□□□ -1.08
NCBP3-202ENST00000572988 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
NCBP3-202ENST00000572988 GPBP1L1Q9HC44 474 aaPredicted RBP8.31□□□□□ -1.08
NCBP3-202ENST00000572988 TOP2BQ02880 1626 aa8.31□□□□□ -1.08
NCBP3-202ENST00000572988 ABCA5Q8WWZ7 1642 aa8.31□□□□□ -1.08
NCBP3-202ENST00000572988 IGF1RP08069 1367 aa8.31□□□□□ -1.08
NCBP3-202ENST00000572988 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
NCBP3-202ENST00000572988 MORN1Q5T089 497 aa8.3□□□□□ -1.08
NCBP3-202ENST00000572988 NUP160Q12769 1436 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 TRAF7Q6Q0C0 670 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 SPIRE2Q8WWL2 714 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 ERCC6L2Q5T890 1561 aa8.29□□□□□ -1.08
NCBP3-202ENST00000572988 HOXA2O43364 376 aa8.28□□□□□ -1.08
NCBP3-202ENST00000572988 TLL1O43897 1013 aa8.28□□□□□ -1.08
NCBP3-202ENST00000572988 DIXDC1Q155Q3 683 aa8.27□□□□□ -1.09
NCBP3-202ENST00000572988 HLA-CQ95604 372 aa8.27□□□□□ -1.09
NCBP3-202ENST00000572988 TBC1D2Q9BYX2 928 aa8.27□□□□□ -1.09
NCBP3-202ENST00000572988 PRG4Q92954 1404 aaPredicted RBP8.27□□□□□ -1.09
NCBP3-202ENST00000572988 PBRM1Q86U86 1689 aa8.27□□□□□ -1.09
NCBP3-202ENST00000572988 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
NCBP3-202ENST00000572988 BIVM-ERCC5R4GMW8 1640 aa8.26□□□□□ -1.09
NCBP3-202ENST00000572988 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
NCBP3-202ENST00000572988 GUCA2AQ02747 115 aa8.26□□□□□ -1.09
NCBP3-202ENST00000572988 SPSB2Q99619 263 aa8.26□□□□□ -1.09
NCBP3-202ENST00000572988 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
NCBP3-202ENST00000572988 ERICH3Q5RHP9 1530 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 MOXD2PA6NHM9 499 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 ADH1BP00325 375 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 FDX1P10109 184 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 NDUFV2P19404 249 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 GGCXP38435 758 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 Q3C1V9 767 aa8.25□□□□□ -1.09
NCBP3-202ENST00000572988 ADAMTS12P58397 1594 aa8.24□□□□□ -1.09
NCBP3-202ENST00000572988 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
NCBP3-202ENST00000572988 TTBK1Q5TCY1 1321 aaPredicted RBP8.24□□□□□ -1.09
NCBP3-202ENST00000572988 KIF27Q86VH2 1401 aa8.23□□□□□ -1.09
NCBP3-202ENST00000572988 NRG2O14511 850 aaPredicted RBP8.23□□□□□ -1.09
NCBP3-202ENST00000572988 RNF19BQ6ZMZ0 732 aa8.23□□□□□ -1.09
NCBP3-202ENST00000572988 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
NCBP3-202ENST00000572988 SLC6A16Q9GZN6 736 aa8.23□□□□□ -1.09
NCBP3-202ENST00000572988 V9GY48 417 aaPredicted RBP8.23□□□□□ -1.09
NCBP3-202ENST00000572988 BRPF1P55201 1214 aaPredicted RBP8.22□□□□□ -1.09
NCBP3-202ENST00000572988 BRICD5Q6PL45 260 aa8.22□□□□□ -1.09
NCBP3-202ENST00000572988 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
NCBP3-202ENST00000572988 CARMIL1Q5VZK9 1371 aa8.22□□□□□ -1.09
NCBP3-202ENST00000572988 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
NCBP3-202ENST00000572988 S1PR4O95977 384 aa8.21□□□□□ -1.1
NCBP3-202ENST00000572988 FAM69CQ0P6D2 419 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms