RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
NCBP3-202ENST00000572988 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
NCBP3-202ENST00000572988 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
NCBP3-202ENST00000572988 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
NCBP3-202ENST00000572988 FOXD1Q16676 465 aa17.28■□□□□ 0.36
NCBP3-202ENST00000572988 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
NCBP3-202ENST00000572988 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
NCBP3-202ENST00000572988 MSH5O43196 834 aa16.12■□□□□ 0.17
NCBP3-202ENST00000572988 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
NCBP3-202ENST00000572988 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
NCBP3-202ENST00000572988 ADRA2BP18089 450 aa16.05■□□□□ 0.16
NCBP3-202ENST00000572988 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
NCBP3-202ENST00000572988 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
NCBP3-202ENST00000572988 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
NCBP3-202ENST00000572988 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
NCBP3-202ENST00000572988 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
NCBP3-202ENST00000572988 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
NCBP3-202ENST00000572988 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
NCBP3-202ENST00000572988 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
NCBP3-202ENST00000572988 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
NCBP3-202ENST00000572988 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
NCBP3-202ENST00000572988 KCNA4P22459 653 aa13.85□□□□□ -0.19
NCBP3-202ENST00000572988 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
NCBP3-202ENST00000572988 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
NCBP3-202ENST00000572988 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
NCBP3-202ENST00000572988 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
NCBP3-202ENST00000572988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
NCBP3-202ENST00000572988 SLC4A1APQ9BWU0 796 aaKnown RBP13.21□□□□□ -0.29
NCBP3-202ENST00000572988 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
NCBP3-202ENST00000572988 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
NCBP3-202ENST00000572988 CAPN15O75808 1086 aa12.94□□□□□ -0.34
NCBP3-202ENST00000572988 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
NCBP3-202ENST00000572988 DSG3P32926 999 aa12.9□□□□□ -0.34
NCBP3-202ENST00000572988 EHMT2Q96KQ7 1210 aa12.77□□□□□ -0.37
NCBP3-202ENST00000572988 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
NCBP3-202ENST00000572988 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
NCBP3-202ENST00000572988 ZBTB22O15209 634 aa12.7□□□□□ -0.38
NCBP3-202ENST00000572988 ABCB7O75027 752 aa12.66□□□□□ -0.38
NCBP3-202ENST00000572988 POTEHQ6S545 545 aa12.65□□□□□ -0.38
NCBP3-202ENST00000572988 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
NCBP3-202ENST00000572988 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
NCBP3-202ENST00000572988 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
NCBP3-202ENST00000572988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
NCBP3-202ENST00000572988 APLP2Q06481 763 aa12.58□□□□□ -0.4
NCBP3-202ENST00000572988 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
NCBP3-202ENST00000572988 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
NCBP3-202ENST00000572988 POLA2Q14181 598 aa12.35□□□□□ -0.43
NCBP3-202ENST00000572988 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
NCBP3-202ENST00000572988 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
NCBP3-202ENST00000572988 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
NCBP3-202ENST00000572988 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
NCBP3-202ENST00000572988 OSCARQ8IYS5 282 aa11.95□□□□□ -0.5
NCBP3-202ENST00000572988 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
NCBP3-202ENST00000572988 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
NCBP3-202ENST00000572988 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
NCBP3-202ENST00000572988 FBLN2P98095 1184 aa11.84□□□□□ -0.51
NCBP3-202ENST00000572988 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
NCBP3-202ENST00000572988 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
NCBP3-202ENST00000572988 NISCHQ9Y2I1 1504 aa11.74□□□□□ -0.53
NCBP3-202ENST00000572988 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
NCBP3-202ENST00000572988 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
NCBP3-202ENST00000572988 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
NCBP3-202ENST00000572988 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
NCBP3-202ENST00000572988 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
NCBP3-202ENST00000572988 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
NCBP3-202ENST00000572988 HAX1O00165 279 aa11.61□□□□□ -0.55
NCBP3-202ENST00000572988 EVX2Q03828 476 aa11.53□□□□□ -0.56
NCBP3-202ENST00000572988 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
NCBP3-202ENST00000572988 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.57
NCBP3-202ENST00000572988 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
NCBP3-202ENST00000572988 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
NCBP3-202ENST00000572988 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
NCBP3-202ENST00000572988 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
NCBP3-202ENST00000572988 FKBP8Q14318 412 aa11.45□□□□□ -0.58
NCBP3-202ENST00000572988 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
NCBP3-202ENST00000572988 CHADLQ6NUI6 762 aa11.35□□□□□ -0.59
NCBP3-202ENST00000572988 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
NCBP3-202ENST00000572988 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
NCBP3-202ENST00000572988 GABBR2O75899 941 aa11.19□□□□□ -0.62
NCBP3-202ENST00000572988 PROM2Q8N271 834 aa11.18□□□□□ -0.62
NCBP3-202ENST00000572988 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
NCBP3-202ENST00000572988 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
NCBP3-202ENST00000572988 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
NCBP3-202ENST00000572988 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
NCBP3-202ENST00000572988 CREBZFQ9NS37 354 aa11□□□□□ -0.65
NCBP3-202ENST00000572988 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
NCBP3-202ENST00000572988 LHX8Q68G74 356 aa10.97□□□□□ -0.65
NCBP3-202ENST00000572988 MIER1Q8N108 512 aa10.95□□□□□ -0.66
NCBP3-202ENST00000572988 PLCD3Q8N3E9 789 aa10.94□□□□□ -0.66
NCBP3-202ENST00000572988 PLEKHG5O94827 1062 aa10.92□□□□□ -0.66
NCBP3-202ENST00000572988 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
NCBP3-202ENST00000572988 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
NCBP3-202ENST00000572988 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
NCBP3-202ENST00000572988 CLCN6P51797 869 aa10.84□□□□□ -0.67
NCBP3-202ENST00000572988 DCBLD2Q96PD2 775 aa10.82□□□□□ -0.68
NCBP3-202ENST00000572988 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
NCBP3-202ENST00000572988 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
NCBP3-202ENST00000572988 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
NCBP3-202ENST00000572988 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
NCBP3-202ENST00000572988 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms