RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PBRM1Q86U86 1689 aa10.29□□□□□ -0.76
UBR1-203ENST00000562173 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
UBR1-203ENST00000562173 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
UBR1-203ENST00000562173 MS4A1P11836 297 aa10.28□□□□□ -0.76
UBR1-203ENST00000562173 CD46P15529 392 aa10.28□□□□□ -0.76
UBR1-203ENST00000562173 A0A0G2JS52 829 aa10.27□□□□□ -0.77
UBR1-203ENST00000562173 PPP4CP60510 307 aa10.27□□□□□ -0.77
UBR1-203ENST00000562173 FGD5Q6ZNL6 1462 aa10.26□□□□□ -0.77
UBR1-203ENST00000562173 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
UBR1-203ENST00000562173 DIXDC1Q155Q3 683 aa10.26□□□□□ -0.77
UBR1-203ENST00000562173 PRR14Q9BWN1 585 aa10.26□□□□□ -0.77
UBR1-203ENST00000562173 CUX1P39880 1505 aa10.25□□□□□ -0.77
UBR1-203ENST00000562173 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
UBR1-203ENST00000562173 GAPVD1Q14C86 1478 aa10.24□□□□□ -0.77
UBR1-203ENST00000562173 RDH13Q8NBN7 331 aa10.24□□□□□ -0.77
UBR1-203ENST00000562173 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
UBR1-203ENST00000562173 RNF40O75150 1001 aa10.23□□□□□ -0.77
UBR1-203ENST00000562173 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
UBR1-203ENST00000562173 SOGA1O94964 1423 aa10.23□□□□□ -0.77
UBR1-203ENST00000562173 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
UBR1-203ENST00000562173 USP46P62068 366 aa10.22□□□□□ -0.77
UBR1-203ENST00000562173 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
UBR1-203ENST00000562173 SLC10A3P09131 477 aa10.21□□□□□ -0.77
UBR1-203ENST00000562173 APLP1P51693 650 aa10.21□□□□□ -0.77
UBR1-203ENST00000562173 KCNC4Q03721 635 aa10.21□□□□□ -0.77
UBR1-203ENST00000562173 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.77
UBR1-203ENST00000562173 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
UBR1-203ENST00000562173 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
UBR1-203ENST00000562173 CFHP08603 1231 aa10.2□□□□□ -0.78
UBR1-203ENST00000562173 GCGRP47871 477 aa10.2□□□□□ -0.78
UBR1-203ENST00000562173 TJAP1Q5JTD0 557 aa10.2□□□□□ -0.78
UBR1-203ENST00000562173 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
UBR1-203ENST00000562173 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
UBR1-203ENST00000562173 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
UBR1-203ENST00000562173 TSPOAP1O95153 1857 aa10.17□□□□□ -0.78
UBR1-203ENST00000562173 KDM4AO75164 1064 aa10.17□□□□□ -0.78
UBR1-203ENST00000562173 GJA5P36382 358 aa10.17□□□□□ -0.78
UBR1-203ENST00000562173 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
UBR1-203ENST00000562173 MTRQ99707 1265 aa10.17□□□□□ -0.78
UBR1-203ENST00000562173 ABCC8Q09428 1581 aa10.17□□□□□ -0.78
UBR1-203ENST00000562173 SYNJ2O15056 1496 aa10.16□□□□□ -0.78
UBR1-203ENST00000562173 ABCA5Q8WWZ7 1642 aa10.15□□□□□ -0.78
UBR1-203ENST00000562173 RGS20O76081 388 aa10.15□□□□□ -0.78
UBR1-203ENST00000562173 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
UBR1-203ENST00000562173 IL27Q8NEV9 243 aa10.15□□□□□ -0.78
UBR1-203ENST00000562173 TBC1D2Q9BYX2 928 aa10.15□□□□□ -0.78
UBR1-203ENST00000562173 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
UBR1-203ENST00000562173 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
UBR1-203ENST00000562173 GRIN2BQ13224 1484 aa10.14□□□□□ -0.79
UBR1-203ENST00000562173 MAGI1Q96QZ7 1491 aaPredicted RBP10.14□□□□□ -0.79
UBR1-203ENST00000562173 HOXA2O43364 376 aa10.13□□□□□ -0.79
UBR1-203ENST00000562173 TUSC1Q2TAM9 212 aa10.13□□□□□ -0.79
UBR1-203ENST00000562173 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
UBR1-203ENST00000562173 ZNF516Q92618 1163 aa10.13□□□□□ -0.79
UBR1-203ENST00000562173 IL21Q9HBE4 155 aa10.13□□□□□ -0.79
UBR1-203ENST00000562173 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
UBR1-203ENST00000562173 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
UBR1-203ENST00000562173 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
UBR1-203ENST00000562173 FUT2Q10981 343 aa10.1□□□□□ -0.79
UBR1-203ENST00000562173 SHROOM2Q13796 1616 aa10.1□□□□□ -0.79
UBR1-203ENST00000562173 ADAMTS12P58397 1594 aa10.09□□□□□ -0.79
UBR1-203ENST00000562173 SPTLC1O15269 473 aa10.09□□□□□ -0.79
UBR1-203ENST00000562173 RSBN1LQ6PCB5 846 aaPredicted RBP10.09□□□□□ -0.79
UBR1-203ENST00000562173 PCMTD1Q96MG8 357 aaPredicted RBP10.09□□□□□ -0.79
UBR1-203ENST00000562173 COPS2P61201 443 aa10.08□□□□□ -0.8
UBR1-203ENST00000562173 PCDHB3Q9Y5E6 796 aa10.08□□□□□ -0.8
UBR1-203ENST00000562173 GRIN2AQ12879 1464 aa10.07□□□□□ -0.8
UBR1-203ENST00000562173 NKX2-3Q8TAU0 364 aa10.07□□□□□ -0.8
UBR1-203ENST00000562173 MOXD2PA6NHM9 499 aa10.06□□□□□ -0.8
UBR1-203ENST00000562173 MORN1Q5T089 497 aa10.06□□□□□ -0.8
UBR1-203ENST00000562173 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
UBR1-203ENST00000562173 NR1I2O75469 434 aa10.05□□□□□ -0.8
UBR1-203ENST00000562173 Q3C1V9 767 aa10.05□□□□□ -0.8
UBR1-203ENST00000562173 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
UBR1-203ENST00000562173 BLOC1S3Q6QNY0 202 aa10.05□□□□□ -0.8
UBR1-203ENST00000562173 DIP2BQ9P265 1576 aa10.05□□□□□ -0.8
UBR1-203ENST00000562173 ADCY10Q96PN6 1610 aa10.04□□□□□ -0.8
UBR1-203ENST00000562173 FDX1P10109 184 aa10.04□□□□□ -0.8
UBR1-203ENST00000562173 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
UBR1-203ENST00000562173 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
UBR1-203ENST00000562173 ZPR1O75312 459 aa10.03□□□□□ -0.8
UBR1-203ENST00000562173 NUP160Q12769 1436 aa10.03□□□□□ -0.8
UBR1-203ENST00000562173 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
UBR1-203ENST00000562173 LIMD1Q9UGP4 676 aa10.03□□□□□ -0.8
UBR1-203ENST00000562173 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.8
UBR1-203ENST00000562173 SPDYE5A6NIY4 337 aa10.02□□□□□ -0.81
UBR1-203ENST00000562173 KDM6BO15054 1643 aa10.01□□□□□ -0.81
UBR1-203ENST00000562173 ZBTB3Q9H5J0 574 aa10.01□□□□□ -0.81
UBR1-203ENST00000562173 POLR3EQ9NVU0 708 aa10.01□□□□□ -0.81
UBR1-203ENST00000562173 PPRC1Q5VV67 1664 aaKnown RBP10.01□□□□□ -0.81
UBR1-203ENST00000562173 NDUFV2P19404 249 aa10□□□□□ -0.81
UBR1-203ENST00000562173 PPP2R2DQ66LE6 453 aa10□□□□□ -0.81
UBR1-203ENST00000562173 TLL1O43897 1013 aa9.99□□□□□ -0.81
UBR1-203ENST00000562173 FAM69CQ0P6D2 419 aa9.99□□□□□ -0.81
UBR1-203ENST00000562173 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
UBR1-203ENST00000562173 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
UBR1-203ENST00000562173 PRG4Q92954 1404 aaPredicted RBP9.99□□□□□ -0.81
UBR1-203ENST00000562173 LILRB3O75022 631 aa9.98□□□□□ -0.81
UBR1-203ENST00000562173 MTMR2Q13614 643 aa9.98□□□□□ -0.81
UBR1-203ENST00000562173 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms