RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 LSM11P83369 360 aaKnown RBP eCLIP20.89■□□□□ 0.93
CASC4-208ENST00000559151 ZNF330Q9Y3S2 320 aaPredicted RBP20.89■□□□□ 0.93
CASC4-208ENST00000559151 C6orf229H3BNL8 230 aa20.88■□□□□ 0.93
CASC4-208ENST00000559151 ABL2P42684 1182 aa20.88■□□□□ 0.93
CASC4-208ENST00000559151 CTDSPL2Q05D32 466 aa20.88■□□□□ 0.93
CASC4-208ENST00000559151 KMT5BQ4FZB7 885 aa20.87■□□□□ 0.93
CASC4-208ENST00000559151 TSC1Q92574 1164 aa20.87■□□□□ 0.93
CASC4-208ENST00000559151 CFAP99D6REC4 459 aa20.86■□□□□ 0.93
CASC4-208ENST00000559151 LRCH3Q96II8 777 aa20.86■□□□□ 0.93
CASC4-208ENST00000559151 SYMPKQ92797 1274 aaKnown RBP20.85■□□□□ 0.93
CASC4-208ENST00000559151 GJD4Q96KN9 370 aaPredicted RBP20.85■□□□□ 0.93
CASC4-208ENST00000559151 PRM3Q9NNZ6 103 aa20.85■□□□□ 0.93
CASC4-208ENST00000559151 HMX1Q9NP08 348 aaPredicted RBP20.84■□□□□ 0.93
CASC4-208ENST00000559151 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.84■□□□□ 0.93
CASC4-208ENST00000559151 HELBQ8NG08 1087 aaPredicted RBP20.83■□□□□ 0.93
CASC4-208ENST00000559151 HRO43593 1189 aa20.82■□□□□ 0.92
CASC4-208ENST00000559151 LCE2DQ5TA82 110 aaPredicted RBP20.82■□□□□ 0.92
CASC4-208ENST00000559151 PLSCR2Q9NRY7 297 aa20.81■□□□□ 0.92
CASC4-208ENST00000559151 PUS10Q3MIT2 529 aaKnown RBP20.8■□□□□ 0.92
CASC4-208ENST00000559151 WWC1Q8IX03 1113 aa20.79■□□□□ 0.92
CASC4-208ENST00000559151 LRRN4Q8WUT4 740 aa20.79■□□□□ 0.92
CASC4-208ENST00000559151 ACTN4O43707 911 aaKnown RBP20.78■□□□□ 0.92
CASC4-208ENST00000559151 MORN1Q5T089 497 aa20.78■□□□□ 0.92
CASC4-208ENST00000559151 NECTIN2Q92692 538 aa20.78■□□□□ 0.92
CASC4-208ENST00000559151 NDUFB9Q9Y6M9 179 aa20.78■□□□□ 0.92
CASC4-208ENST00000559151 CCDC97Q96F63 343 aaPredicted RBP20.77■□□□□ 0.92
CASC4-208ENST00000559151 TRIM34Q9BYJ4 488 aa20.76■□□□□ 0.91
CASC4-208ENST00000559151 PRR7Q8TB68 274 aa20.75■□□□□ 0.91
CASC4-208ENST00000559151 SERPINA10Q9UK55 444 aa20.75■□□□□ 0.91
CASC4-208ENST00000559151 SLC27A5Q9Y2P5 690 aa20.74■□□□□ 0.91
CASC4-208ENST00000559151 ANKRD13DQ6ZTN6 518 aa20.73■□□□□ 0.91
CASC4-208ENST00000559151 ANKK1Q8NFD2 765 aa20.73■□□□□ 0.91
CASC4-208ENST00000559151 POM121CA8CG34 1229 aa20.72■□□□□ 0.91
CASC4-208ENST00000559151 GOLGA8CPA6NN73 597 aa20.71■□□□□ 0.91
CASC4-208ENST00000559151 IRF5Q13568 498 aa20.7■□□□□ 0.9
CASC4-208ENST00000559151 STAC3Q96MF2 364 aa20.7■□□□□ 0.9
CASC4-208ENST00000559151 BCAMP50895 628 aa20.69■□□□□ 0.9
CASC4-208ENST00000559151 RETREG3Q86VR2 466 aa20.69■□□□□ 0.9
CASC4-208ENST00000559151 SOWAHBA6NEL2 793 aa20.68■□□□□ 0.9
CASC4-208ENST00000559151 GPR37L1O60883 481 aa20.68■□□□□ 0.9
CASC4-208ENST00000559151 PRR14Q9BWN1 585 aa20.68■□□□□ 0.9
CASC4-208ENST00000559151 HPS5Q9UPZ3 1129 aa20.68■□□□□ 0.9
CASC4-208ENST00000559151 PPP4CP60510 307 aa20.67■□□□□ 0.9
CASC4-208ENST00000559151 EPS8L1Q8TE68 723 aa20.67■□□□□ 0.9
CASC4-208ENST00000559151 Q3C1V9 767 aa20.66■□□□□ 0.9
CASC4-208ENST00000559151 APLP1P51693 650 aa20.65■□□□□ 0.9
CASC4-208ENST00000559151 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
CASC4-208ENST00000559151 RNF19BQ6ZMZ0 732 aa20.64■□□□□ 0.89
CASC4-208ENST00000559151 BLOC1S3Q6QNY0 202 aa20.63■□□□□ 0.89
CASC4-208ENST00000559151 GLMNQ92990 594 aa20.63■□□□□ 0.89
CASC4-208ENST00000559151 CALR3Q96L12 384 aaKnown RBP20.62■□□□□ 0.89
CASC4-208ENST00000559151 WNT2BQ93097 391 aa20.61■□□□□ 0.89
CASC4-208ENST00000559151 TSR3Q9UJK0 312 aaKnown RBP20.61■□□□□ 0.89
CASC4-208ENST00000559151 NR6A1Q15406 480 aa20.59■□□□□ 0.89
CASC4-208ENST00000559151 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
CASC4-208ENST00000559151 DESI1Q6ICB0 168 aa20.56■□□□□ 0.88
CASC4-208ENST00000559151 PCDHB3Q9Y5E6 796 aa20.56■□□□□ 0.88
CASC4-208ENST00000559151 VAC14Q08AM6 782 aa20.55■□□□□ 0.88
CASC4-208ENST00000559151 BRICD5Q6PL45 260 aa20.54■□□□□ 0.88
CASC4-208ENST00000559151 USB1Q9BQ65 265 aaKnown RBP20.54■□□□□ 0.88
CASC4-208ENST00000559151 ADAMTS19Q8TE59 1207 aa20.53■□□□□ 0.88
CASC4-208ENST00000559151 SCUBE3Q8IX30 993 aa20.52■□□□□ 0.88
CASC4-208ENST00000559151 LYPD8Q6UX82 237 aa20.51■□□□□ 0.87
CASC4-208ENST00000559151 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
CASC4-208ENST00000559151 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
CASC4-208ENST00000559151 THAP11Q96EK4 314 aa20.5■□□□□ 0.87
CASC4-208ENST00000559151 WBP1LQ9NX94 342 aa20.49■□□□□ 0.87
CASC4-208ENST00000559151 NR1I2O75469 434 aa20.48■□□□□ 0.87
CASC4-208ENST00000559151 FMNL1O95466 1100 aaPredicted RBP20.48■□□□□ 0.87
CASC4-208ENST00000559151 KRTAP3-3Q9BYR6 98 aa20.45■□□□□ 0.86
CASC4-208ENST00000559151 KRTAP3-2Q9BYR7 98 aa20.45■□□□□ 0.86
CASC4-208ENST00000559151 JUNDP17535 347 aa20.41■□□□□ 0.86
CASC4-208ENST00000559151 PDIA4P13667 645 aaKnown RBP20.4■□□□□ 0.86
CASC4-208ENST00000559151 THSD4Q6ZMP0 1018 aa20.39■□□□□ 0.85
CASC4-208ENST00000559151 ALG2Q9H553 416 aa20.38■□□□□ 0.85
CASC4-208ENST00000559151 F12P00748 615 aaPredicted RBP20.37■□□□□ 0.85
CASC4-208ENST00000559151 COPS2P61201 443 aa20.37■□□□□ 0.85
CASC4-208ENST00000559151 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
CASC4-208ENST00000559151 PNMA1Q8ND90 353 aa20.36■□□□□ 0.85
CASC4-208ENST00000559151 MAP10Q9P2G4 905 aa20.36■□□□□ 0.85
CASC4-208ENST00000559151 KCTD12Q96CX2 325 aaKnown RBP20.35■□□□□ 0.85
CASC4-208ENST00000559151 PTPRNQ16849 979 aa20.34■□□□□ 0.85
CASC4-208ENST00000559151 MSS51Q4VC12 460 aa20.32■□□□□ 0.84
CASC4-208ENST00000559151 FAM160A2Q8N612 972 aaPredicted RBP20.32■□□□□ 0.84
CASC4-208ENST00000559151 SPSB2Q99619 263 aa20.32■□□□□ 0.84
CASC4-208ENST00000559151 FKBPLQ9UIM3 349 aa20.31■□□□□ 0.84
CASC4-208ENST00000559151 SOX11P35716 441 aa20.3■□□□□ 0.84
CASC4-208ENST00000559151 PRDM9Q9NQV7 894 aa20.3■□□□□ 0.84
CASC4-208ENST00000559151 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
CASC4-208ENST00000559151 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
CASC4-208ENST00000559151 RFX1P22670 979 aa20.28■□□□□ 0.84
CASC4-208ENST00000559151 CTHP32929 405 aa20.28■□□□□ 0.84
CASC4-208ENST00000559151 RETREG2Q8NC44 543 aa20.28■□□□□ 0.84
CASC4-208ENST00000559151 PPP1R12CQ9BZL4 782 aa20.28■□□□□ 0.84
CASC4-208ENST00000559151 DXOO77932 396 aaKnown RBP20.27■□□□□ 0.84
CASC4-208ENST00000559151 NR1H3Q13133 447 aa20.27■□□□□ 0.84
CASC4-208ENST00000559151 SEMA3FQ13275 785 aa20.27■□□□□ 0.84
CASC4-208ENST00000559151 UCN2Q96RP3 112 aa20.27■□□□□ 0.84
CASC4-208ENST00000559151 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
CASC4-208ENST00000559151 TLL1O43897 1013 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms