RNA–Protein interactions for RNA: ENST00000557157.5

HNRNPC-229, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-229ENST00000557157 PNMA3Q9UL41 463 aa6.77□□□□□ -1.33
HNRNPC-229ENST00000557157 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
HNRNPC-229ENST00000557157 ABCC8Q09428 1581 aa6.77□□□□□ -1.33
HNRNPC-229ENST00000557157 PBRM1Q86U86 1689 aa6.77□□□□□ -1.33
HNRNPC-229ENST00000557157 ERICH6BQ5W0A0 696 aa6.76□□□□□ -1.33
HNRNPC-229ENST00000557157 BCANQ96GW7 911 aa6.76□□□□□ -1.33
HNRNPC-229ENST00000557157 IL21Q9HBE4 155 aa6.76□□□□□ -1.33
HNRNPC-229ENST00000557157 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
HNRNPC-229ENST00000557157 CFAP43Q8NDM7 1665 aa6.75□□□□□ -1.33
HNRNPC-229ENST00000557157 SMAPO00193 183 aa6.75□□□□□ -1.33
HNRNPC-229ENST00000557157 WDR97A6NE52 1622 aa6.75□□□□□ -1.33
HNRNPC-229ENST00000557157 EPRSP07814 1512 aaKnown RBP6.75□□□□□ -1.33
HNRNPC-229ENST00000557157 WIZO95785 1651 aa6.74□□□□□ -1.33
HNRNPC-229ENST00000557157 SLC4A3P48751 1232 aa6.74□□□□□ -1.33
HNRNPC-229ENST00000557157 TJAP1Q5JTD0 557 aa6.74□□□□□ -1.33
HNRNPC-229ENST00000557157 RNF40O75150 1001 aa6.73□□□□□ -1.33
HNRNPC-229ENST00000557157 NUDT18Q6ZVK8 323 aa6.73□□□□□ -1.33
HNRNPC-229ENST00000557157 MTRQ99707 1265 aa6.73□□□□□ -1.33
HNRNPC-229ENST00000557157 FAM198AQ9UFP1 575 aa6.73□□□□□ -1.33
HNRNPC-229ENST00000557157 PLB1Q6P1J6 1458 aa6.73□□□□□ -1.33
HNRNPC-229ENST00000557157 OSBPP22059 807 aa6.72□□□□□ -1.33
HNRNPC-229ENST00000557157 ALKQ9UM73 1620 aa6.72□□□□□ -1.33
HNRNPC-229ENST00000557157 PREX1Q8TCU6 1659 aa6.71□□□□□ -1.33
HNRNPC-229ENST00000557157 SENP3-EIF4A1A0A087X0R7 540 aa6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 GGCXP38435 758 aa6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 SLF2Q8IX21 1173 aa6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 V9GY48 417 aaPredicted RBP6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 ARID4BQ4LE39 1312 aaPredicted RBP6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 KIAA0586Q9BVV6 1533 aa6.71□□□□□ -1.34
HNRNPC-229ENST00000557157 GFRA3O60609 400 aa6.7□□□□□ -1.34
HNRNPC-229ENST00000557157 PRKD2Q9BZL6 878 aa6.7□□□□□ -1.34
HNRNPC-229ENST00000557157 CDHR5Q9HBB8 845 aa6.7□□□□□ -1.34
HNRNPC-229ENST00000557157 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.7□□□□□ -1.34
HNRNPC-229ENST00000557157 ABCC2Q92887 1545 aa6.7□□□□□ -1.34
HNRNPC-229ENST00000557157 NRG2O14511 850 aaPredicted RBP6.69□□□□□ -1.34
HNRNPC-229ENST00000557157 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
HNRNPC-229ENST00000557157 PRR14Q9BWN1 585 aa6.69□□□□□ -1.34
HNRNPC-229ENST00000557157 C3orf80F5H4A9 247 aa6.68□□□□□ -1.34
HNRNPC-229ENST00000557157 APLP1P51693 650 aa6.68□□□□□ -1.34
HNRNPC-229ENST00000557157 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
HNRNPC-229ENST00000557157 TRAF7Q6Q0C0 670 aa6.68□□□□□ -1.34
HNRNPC-229ENST00000557157 TTC13Q8NBP0 860 aa6.68□□□□□ -1.34
HNRNPC-229ENST00000557157 CUL7Q14999 1698 aa6.68□□□□□ -1.34
HNRNPC-229ENST00000557157 FGD5Q6ZNL6 1462 aa6.67□□□□□ -1.34
HNRNPC-229ENST00000557157 SWT1Q5T5J6 900 aaKnown RBP6.67□□□□□ -1.34
HNRNPC-229ENST00000557157 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
HNRNPC-229ENST00000557157 SIGLEC1Q9BZZ2 1709 aa6.67□□□□□ -1.34
HNRNPC-229ENST00000557157 CEBPAP49715 358 aaPredicted RBP6.66□□□□□ -1.34
HNRNPC-229ENST00000557157 YY1P25490 414 aa6.65□□□□□ -1.34
HNRNPC-229ENST00000557157 ZNF516Q92618 1163 aa6.65□□□□□ -1.34
HNRNPC-229ENST00000557157 TMUB1Q9BVT8 246 aa6.65□□□□□ -1.34
HNRNPC-229ENST00000557157 ADAMTS12P58397 1594 aa6.65□□□□□ -1.35
HNRNPC-229ENST00000557157 TRIM52Q96A61 297 aa6.64□□□□□ -1.35
HNRNPC-229ENST00000557157 NPDC1Q9NQX5 325 aaPredicted RBP6.64□□□□□ -1.35
HNRNPC-229ENST00000557157 COPS2P61201 443 aa6.63□□□□□ -1.35
HNRNPC-229ENST00000557157 TTC37Q6PGP7 1564 aa6.63□□□□□ -1.35
HNRNPC-229ENST00000557157 ARHGEF1Q92888 912 aaKnown RBP6.63□□□□□ -1.35
HNRNPC-229ENST00000557157 EYA1Q99502 592 aa6.63□□□□□ -1.35
HNRNPC-229ENST00000557157 MAGI3Q5TCQ9 1506 aa6.62□□□□□ -1.35
HNRNPC-229ENST00000557157 NCOA1Q15788 1441 aa6.62□□□□□ -1.35
HNRNPC-229ENST00000557157 TOM1O60784 492 aa6.62□□□□□ -1.35
HNRNPC-229ENST00000557157 ZPR1O75312 459 aa6.62□□□□□ -1.35
HNRNPC-229ENST00000557157 PKNOX2Q96KN3 472 aa6.62□□□□□ -1.35
HNRNPC-229ENST00000557157 PCDHB3Q9Y5E6 796 aa6.62□□□□□ -1.35
HNRNPC-229ENST00000557157 ABCA5Q8WWZ7 1642 aa6.61□□□□□ -1.35
HNRNPC-229ENST00000557157 RAPGEF3O95398 923 aa6.61□□□□□ -1.35
HNRNPC-229ENST00000557157 DNAJB2P25686 324 aa6.61□□□□□ -1.35
HNRNPC-229ENST00000557157 NKX2-3Q8TAU0 364 aa6.61□□□□□ -1.35
HNRNPC-229ENST00000557157 RBM46Q8TBY0 533 aaKnown RBP6.61□□□□□ -1.35
HNRNPC-229ENST00000557157 PDZRN3Q9UPQ7 1066 aa6.61□□□□□ -1.35
HNRNPC-229ENST00000557157 ARAP3Q8WWN8 1544 aa6.6□□□□□ -1.35
HNRNPC-229ENST00000557157 UHRF1BP1Q6BDS2 1440 aa6.6□□□□□ -1.35
HNRNPC-229ENST00000557157 TPRNQ4KMQ1 711 aa6.6□□□□□ -1.35
HNRNPC-229ENST00000557157 CEP350Q5VT06 3117 aa6.6□□□□□ -1.35
HNRNPC-229ENST00000557157 KIAA0556O60303 1618 aa6.59□□□□□ -1.35
HNRNPC-229ENST00000557157 KMT5BQ4FZB7 885 aa6.59□□□□□ -1.35
HNRNPC-229ENST00000557157 RUSC2Q8N2Y8 1516 aa6.59□□□□□ -1.35
HNRNPC-229ENST00000557157 FER1L4A9Z1Z3 1794 aa6.59□□□□□ -1.35
HNRNPC-229ENST00000557157 CD109Q6YHK3 1445 aa6.59□□□□□ -1.36
HNRNPC-229ENST00000557157 FRMPD1Q5SYB0 1578 aa6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 LCE2BO14633 110 aa6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 PTGDRQ13258 359 aa6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 MLECQ14165 292 aa6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 PODXL2Q9NZ53 605 aa6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 LRP5O75197 1615 aa6.58□□□□□ -1.36
HNRNPC-229ENST00000557157 TMEM134Q9H6X4 195 aa6.57□□□□□ -1.36
HNRNPC-229ENST00000557157 MLLT3P42568 568 aaPredicted RBP6.56□□□□□ -1.36
HNRNPC-229ENST00000557157 BLOC1S3Q6QNY0 202 aa6.56□□□□□ -1.36
HNRNPC-229ENST00000557157 RNF223E7ERA6 249 aa6.55□□□□□ -1.36
HNRNPC-229ENST00000557157 ACTN4O43707 911 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-229ENST00000557157 SLC19A1P41440 591 aa6.55□□□□□ -1.36
HNRNPC-229ENST00000557157 P3H3Q8IVL6 736 aa6.55□□□□□ -1.36
HNRNPC-229ENST00000557157 ADGRG1Q9Y653 693 aa6.55□□□□□ -1.36
HNRNPC-229ENST00000557157 LRRC7Q96NW7 1537 aa6.55□□□□□ -1.36
HNRNPC-229ENST00000557157 PTPRGP23470 1445 aa6.54□□□□□ -1.36
HNRNPC-229ENST00000557157 NUTM2FA1L443 756 aa6.54□□□□□ -1.36
HNRNPC-229ENST00000557157 ZNF787Q6DD87 383 aa6.54□□□□□ -1.36
HNRNPC-229ENST00000557157 ANKLE1Q8NAG6 615 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms