RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 WWC2Q6AWC2 1192 aa14.56□□□□□ -0.08
NEK9-210ENST00000557026 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
NEK9-210ENST00000557026 EIF2S2P20042 333 aaKnown RBP14.55□□□□□ -0.08
NEK9-210ENST00000557026 ABTB2Q8N961 1025 aa14.55□□□□□ -0.08
NEK9-210ENST00000557026 PRM3Q9NNZ6 103 aa14.55□□□□□ -0.08
NEK9-210ENST00000557026 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
NEK9-210ENST00000557026 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
NEK9-210ENST00000557026 DZIP1LQ8IYY4 767 aaKnown RBP14.54□□□□□ -0.08
NEK9-210ENST00000557026 RALYLQ86SE5 291 aaKnown RBP14.54□□□□□ -0.08
NEK9-210ENST00000557026 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
NEK9-210ENST00000557026 ZBED9Q6R2W3 1325 aa14.53□□□□□ -0.08
NEK9-210ENST00000557026 DHX16O60231 1041 aaKnown RBP14.53□□□□□ -0.08
NEK9-210ENST00000557026 PSMA5P28066 241 aa14.53□□□□□ -0.08
NEK9-210ENST00000557026 APPP05067 770 aa14.53□□□□□ -0.08
NEK9-210ENST00000557026 ZNF428Q96B54 188 aa14.53□□□□□ -0.08
NEK9-210ENST00000557026 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
NEK9-210ENST00000557026 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
NEK9-210ENST00000557026 RILPL2Q969X0 211 aa14.52□□□□□ -0.09
NEK9-210ENST00000557026 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.09
NEK9-210ENST00000557026 INTS3Q68E01 1043 aaKnown RBP14.51□□□□□ -0.09
NEK9-210ENST00000557026 ZSCAN25Q6NSZ9 544 aa14.51□□□□□ -0.09
NEK9-210ENST00000557026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.09
NEK9-210ENST00000557026 GOLGA6L19H0YKK7 550 aa14.51□□□□□ -0.09
NEK9-210ENST00000557026 ANKRD45Q5TZF3 282 aa14.51□□□□□ -0.09
NEK9-210ENST00000557026 UBTFL1P0CB47 393 aaPredicted RBP14.51□□□□□ -0.09
NEK9-210ENST00000557026 CCAR1Q8IX12 1150 aaKnown RBP14.51□□□□□ -0.09
NEK9-210ENST00000557026 A0A0U1RQG5 324 aaPredicted RBP14.5□□□□□ -0.09
NEK9-210ENST00000557026 PRKRIP1Q9H875 184 aaPredicted RBP14.5□□□□□ -0.09
NEK9-210ENST00000557026 AKNAQ7Z591 1439 aa14.5□□□□□ -0.09
NEK9-210ENST00000557026 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
NEK9-210ENST00000557026 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.5□□□□□ -0.095e-6■■■■■ 34.6
NEK9-210ENST00000557026 CCDC141Q6ZP82 1450 aa14.49□□□□□ -0.09
NEK9-210ENST00000557026 FBXW7Q969H0 707 aa14.49□□□□□ -0.09
NEK9-210ENST00000557026 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
NEK9-210ENST00000557026 EPRSP07814 1512 aaKnown RBP14.49□□□□□ -0.09
NEK9-210ENST00000557026 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
NEK9-210ENST00000557026 NFXL1Q6ZNB6 911 aa14.49□□□□□ -0.09
NEK9-210ENST00000557026 CLUAP1Q96AJ1 413 aa14.49□□□□□ -0.09
NEK9-210ENST00000557026 NAP1L5Q96NT1 182 aaPredicted RBP14.49□□□□□ -0.09
NEK9-210ENST00000557026 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
NEK9-210ENST00000557026 DHX8Q14562 1220 aaKnown RBP14.48□□□□□ -0.09
NEK9-210ENST00000557026 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
NEK9-210ENST00000557026 CLASRPQ8N2M8 674 aaKnown RBP14.48□□□□□ -0.09
NEK9-210ENST00000557026 BECN2A8MW95 431 aa14.48□□□□□ -0.09
NEK9-210ENST00000557026 PIP4K2AP48426 406 aaPredicted RBP14.47□□□□□ -0.09
NEK9-210ENST00000557026 ZNF652Q9Y2D9 606 aa14.47□□□□□ -0.09
NEK9-210ENST00000557026 FAM161AQ3B820 660 aa14.47□□□□□ -0.09
NEK9-210ENST00000557026 KIAA1107Q9UPP5 1409 aa14.47□□□□□ -0.09
NEK9-210ENST00000557026 AFAP1Q8N556 730 aa14.46□□□□□ -0.09
NEK9-210ENST00000557026 TEX14Q8IWB6 1497 aa14.46□□□□□ -0.09
NEK9-210ENST00000557026 PRDM11Q9NQV5 511 aa14.46□□□□□ -0.09
NEK9-210ENST00000557026 MCM2P49736 904 aa14.46□□□□□ -0.09
NEK9-210ENST00000557026 CABP4P57796 275 aa14.46□□□□□ -0.09
NEK9-210ENST00000557026 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
NEK9-210ENST00000557026 TOM1L2Q6ZVM7 507 aa14.46□□□□□ -0.1
NEK9-210ENST00000557026 CNTROBQ8N137 903 aa14.46□□□□□ -0.1
NEK9-210ENST00000557026 NACAP1Q9BZK3 213 aa14.46□□□□□ -0.1
NEK9-210ENST00000557026 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
NEK9-210ENST00000557026 DNAI2Q9GZS0 605 aa14.45□□□□□ -0.1
NEK9-210ENST00000557026 CCDC158Q5M9N0 1113 aa14.45□□□□□ -0.1
NEK9-210ENST00000557026 CD109Q6YHK3 1445 aa14.45□□□□□ -0.1
NEK9-210ENST00000557026 CCT4P50991 539 aaKnown RBP14.45□□□□□ -0.1
NEK9-210ENST00000557026 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
NEK9-210ENST00000557026 ANO2Q9NQ90 1003 aa14.45□□□□□ -0.1
NEK9-210ENST00000557026 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 GPS2Q13227 327 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 GOLGA6L3A6NEY3 463 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 APAF1O14727 1248 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 PLB1Q6P1J6 1458 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 KIF7Q2M1P5 1343 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 NUCB2P80303 420 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 CUL7Q14999 1698 aa14.44□□□□□ -0.1
NEK9-210ENST00000557026 TMOD2Q9NZR1 351 aa14.43□□□□□ -0.1
NEK9-210ENST00000557026 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
NEK9-210ENST00000557026 ZNF287Q9HBT7 754 aa14.43□□□□□ -0.1
NEK9-210ENST00000557026 PDCP20941 246 aa14.42□□□□□ -0.1
NEK9-210ENST00000557026 CDR1P51861 262 aa14.42□□□□□ -0.1
NEK9-210ENST00000557026 SENP3-EIF4A1A0A087X0R7 540 aa14.42□□□□□ -0.1
NEK9-210ENST00000557026 RAD21O60216 631 aa14.42□□□□□ -0.1
NEK9-210ENST00000557026 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
NEK9-210ENST00000557026 RRP7AQ9Y3A4 280 aaKnown RBP14.42□□□□□ -0.1
NEK9-210ENST00000557026 STARD3NLO95772 234 aa14.42□□□□□ -0.1
NEK9-210ENST00000557026 HSP90AB3PQ58FF7 597 aa14.41□□□□□ -0.1
NEK9-210ENST00000557026 TXLNAP40222 546 aa14.41□□□□□ -0.1
NEK9-210ENST00000557026 AMOTQ4VCS5 1084 aa14.41□□□□□ -0.1
NEK9-210ENST00000557026 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
NEK9-210ENST00000557026 WASHC4Q2M389 1173 aa14.41□□□□□ -0.1
NEK9-210ENST00000557026 PRAM1Q96QH2 718 aa14.41□□□□□ -0.1
NEK9-210ENST00000557026 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.1
NEK9-210ENST00000557026 RBM42Q9BTD8 480 aaKnown RBP14.4□□□□□ -0.1
NEK9-210ENST00000557026 PES1O00541 588 aaKnown RBP14.4□□□□□ -0.1
NEK9-210ENST00000557026 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.4□□□□□ -0.1
NEK9-210ENST00000557026 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
NEK9-210ENST00000557026 CCDC27Q2M243 656 aa14.4□□□□□ -0.1
NEK9-210ENST00000557026 TEX13AQ9BXU3 409 aaPredicted RBP14.4□□□□□ -0.1
NEK9-210ENST00000557026 SRCIN1Q9C0H9 1055 aa14.4□□□□□ -0.1
NEK9-210ENST00000557026 MCTP1Q6DN14 999 aa14.39□□□□□ -0.11
NEK9-210ENST00000557026 TXLNBQ8N3L3 684 aa14.39□□□□□ -0.11
NEK9-210ENST00000557026 IL27Q8NEV9 243 aa14.39□□□□□ -0.11
NEK9-210ENST00000557026 GCC1Q96CN9 775 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms