RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PPP4CP60510 307 aa8.95□□□□□ -0.98
HMGB1P44-201ENST00000508597 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
HMGB1P44-201ENST00000508597 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
HMGB1P44-201ENST00000508597 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
HMGB1P44-201ENST00000508597 AMHR2Q16671 573 aa8.94□□□□□ -0.98
HMGB1P44-201ENST00000508597 SLF2Q8IX21 1173 aa8.93□□□□□ -0.98
HMGB1P44-201ENST00000508597 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
HMGB1P44-201ENST00000508597 NUP160Q12769 1436 aa8.93□□□□□ -0.98
HMGB1P44-201ENST00000508597 KIF21BO75037 1637 aa8.93□□□□□ -0.98
HMGB1P44-201ENST00000508597 PDE4DQ08499 809 aa8.92□□□□□ -0.98
HMGB1P44-201ENST00000508597 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P44-201ENST00000508597 GPCPD1Q9NPB8 672 aa8.91□□□□□ -0.98
HMGB1P44-201ENST00000508597 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.98
HMGB1P44-201ENST00000508597 GPBP1L1Q9HC44 474 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P44-201ENST00000508597 FAM217BQ9NTX9 383 aaPredicted RBP8.9□□□□□ -0.98
HMGB1P44-201ENST00000508597 MS4A1P11836 297 aa8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 GIGYF2Q6Y7W6 1299 aaKnown RBP8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 CEP170Q5SW79 1584 aa8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 GOLGA3Q08378 1498 aa8.89□□□□□ -0.99
HMGB1P44-201ENST00000508597 CFHP08603 1231 aa8.88□□□□□ -0.99
HMGB1P44-201ENST00000508597 CD46P15529 392 aa8.88□□□□□ -0.99
HMGB1P44-201ENST00000508597 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P44-201ENST00000508597 CLCN1P35523 988 aa8.88□□□□□ -0.99
HMGB1P44-201ENST00000508597 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
HMGB1P44-201ENST00000508597 GCGRP47871 477 aa8.86□□□□□ -0.99
HMGB1P44-201ENST00000508597 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
HMGB1P44-201ENST00000508597 SHROOM2Q13796 1616 aa8.85□□□□□ -0.99
HMGB1P44-201ENST00000508597 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
HMGB1P44-201ENST00000508597 TJAP1Q5JTD0 557 aa8.85□□□□□ -0.99
HMGB1P44-201ENST00000508597 HLA-CQ95604 372 aa8.85□□□□□ -0.99
HMGB1P44-201ENST00000508597 IQGAP2Q13576 1575 aa8.85□□□□□ -0.99
HMGB1P44-201ENST00000508597 UBTFP17480 764 aaKnown RBP8.84□□□□□ -0.99
HMGB1P44-201ENST00000508597 ACTN4O43707 911 aaKnown RBP8.83□□□□□ -1
HMGB1P44-201ENST00000508597 COPS2P61201 443 aa8.83□□□□□ -1
HMGB1P44-201ENST00000508597 FUT2Q10981 343 aa8.83□□□□□ -1
HMGB1P44-201ENST00000508597 BLOC1S3Q6QNY0 202 aa8.83□□□□□ -1
HMGB1P44-201ENST00000508597 SULF1Q8IWU6 871 aa8.83□□□□□ -1
HMGB1P44-201ENST00000508597 MTRQ99707 1265 aa8.83□□□□□ -1
HMGB1P44-201ENST00000508597 CARMIL2Q6F5E8 1435 aa8.82□□□□□ -1
HMGB1P44-201ENST00000508597 UGGT2Q9NYU1 1516 aa8.82□□□□□ -1
HMGB1P44-201ENST00000508597 TNIKQ9UKE5 1360 aa8.82□□□□□ -1
HMGB1P44-201ENST00000508597 SLC4A3P48751 1232 aa8.81□□□□□ -1
HMGB1P44-201ENST00000508597 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
HMGB1P44-201ENST00000508597 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
HMGB1P44-201ENST00000508597 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
HMGB1P44-201ENST00000508597 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
HMGB1P44-201ENST00000508597 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
HMGB1P44-201ENST00000508597 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
HMGB1P44-201ENST00000508597 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
HMGB1P44-201ENST00000508597 PRG4Q92954 1404 aaPredicted RBP8.8□□□□□ -1
HMGB1P44-201ENST00000508597 GUCA2AQ02747 115 aa8.79□□□□□ -1
HMGB1P44-201ENST00000508597 KMT5BQ4FZB7 885 aa8.79□□□□□ -1
HMGB1P44-201ENST00000508597 FAM117AQ9C073 453 aa8.79□□□□□ -1
HMGB1P44-201ENST00000508597 ARHGEF11O15085 1522 aa8.79□□□□□ -1
HMGB1P44-201ENST00000508597 KDM4AO75164 1064 aa8.78□□□□□ -1
HMGB1P44-201ENST00000508597 ITGBL1O95965 494 aaPredicted RBP8.78□□□□□ -1
HMGB1P44-201ENST00000508597 MORN1Q5T089 497 aa8.78□□□□□ -1
HMGB1P44-201ENST00000508597 RSPH4AQ5TD94 716 aa8.78□□□□□ -1
HMGB1P44-201ENST00000508597 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
HMGB1P44-201ENST00000508597 EFCAB5A4FU69 1503 aa8.78□□□□□ -1
HMGB1P44-201ENST00000508597 TLL1O43897 1013 aa8.77□□□□□ -1.01
HMGB1P44-201ENST00000508597 NDUFV2P19404 249 aa8.77□□□□□ -1.01
HMGB1P44-201ENST00000508597 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
HMGB1P44-201ENST00000508597 SCUBE3Q8IX30 993 aa8.77□□□□□ -1.01
HMGB1P44-201ENST00000508597 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
HMGB1P44-201ENST00000508597 RIMBP3CA6NJZ7 1639 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 RIMBP3BA6NNM3 1639 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 RIMBP3Q9UFD9 1639 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 DISP1Q96F81 1524 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 NECTIN2Q92692 538 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 SAMD9Q5K651 1589 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 KIAA0556O60303 1618 aa8.76□□□□□ -1.01
HMGB1P44-201ENST00000508597 MOXD2PA6NHM9 499 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 HOXA2O43364 376 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 ZPR1O75312 459 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
HMGB1P44-201ENST00000508597 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
HMGB1P44-201ENST00000508597 KCNC4Q03721 635 aa8.74□□□□□ -1.01
HMGB1P44-201ENST00000508597 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
HMGB1P44-201ENST00000508597 PTPRGP23470 1445 aa8.73□□□□□ -1.01
HMGB1P44-201ENST00000508597 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
HMGB1P44-201ENST00000508597 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
HMGB1P44-201ENST00000508597 THAP11Q96EK4 314 aa8.73□□□□□ -1.01
HMGB1P44-201ENST00000508597 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
HMGB1P44-201ENST00000508597 NUTM1Q86Y26 1132 aa8.72□□□□□ -1.01
HMGB1P44-201ENST00000508597 ERCC6L2Q5T890 1561 aa8.72□□□□□ -1.01
HMGB1P44-201ENST00000508597 CLIP1P30622 1438 aa8.71□□□□□ -1.01
HMGB1P44-201ENST00000508597 ARAP1Q96P48 1450 aa8.71□□□□□ -1.01
HMGB1P44-201ENST00000508597 IL27Q8NEV9 243 aa8.71□□□□□ -1.02
HMGB1P44-201ENST00000508597 PCDHB15Q9Y5E8 787 aa8.71□□□□□ -1.02
HMGB1P44-201ENST00000508597 CEP162Q5TB80 1403 aa8.71□□□□□ -1.02
HMGB1P44-201ENST00000508597 FMN1Q68DA7 1419 aa8.71□□□□□ -1.02
HMGB1P44-201ENST00000508597 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms