RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
CCDC149-206ENST00000508236 ADAMTS19Q8TE59 1207 aa11.64□□□□□ -0.55
CCDC149-206ENST00000508236 GJD4Q96KN9 370 aaPredicted RBP11.64□□□□□ -0.55
CCDC149-206ENST00000508236 CADPSQ9ULU8 1353 aa11.64□□□□□ -0.55
CCDC149-206ENST00000508236 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
CCDC149-206ENST00000508236 C7P10643 843 aa11.63□□□□□ -0.55
CCDC149-206ENST00000508236 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
CCDC149-206ENST00000508236 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
CCDC149-206ENST00000508236 CABLES1Q8TDN4 633 aa11.63□□□□□ -0.55
CCDC149-206ENST00000508236 DNAJB2P25686 324 aa11.62□□□□□ -0.55
CCDC149-206ENST00000508236 RBM25P49756 843 aaKnown RBP11.62□□□□□ -0.55
CCDC149-206ENST00000508236 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
CCDC149-206ENST00000508236 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
CCDC149-206ENST00000508236 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.61□□□□□ -0.55
CCDC149-206ENST00000508236 ZBTB3Q9H5J0 574 aa11.6□□□□□ -0.55
CCDC149-206ENST00000508236 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
CCDC149-206ENST00000508236 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
CCDC149-206ENST00000508236 ZNF428Q96B54 188 aa11.59□□□□□ -0.55
CCDC149-206ENST00000508236 PPP1R12CQ9BZL4 782 aa11.59□□□□□ -0.55
CCDC149-206ENST00000508236 KDM4AO75164 1064 aa11.58□□□□□ -0.56
CCDC149-206ENST00000508236 TMEM134Q9H6X4 195 aa11.58□□□□□ -0.56
CCDC149-206ENST00000508236 NUDT7P0C024 238 aa11.57□□□□□ -0.56
CCDC149-206ENST00000508236 COL9A1P20849 921 aa11.57□□□□□ -0.56
CCDC149-206ENST00000508236 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
CCDC149-206ENST00000508236 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
CCDC149-206ENST00000508236 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
CCDC149-206ENST00000508236 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
CCDC149-206ENST00000508236 GABBR2O75899 941 aa11.55□□□□□ -0.56
CCDC149-206ENST00000508236 USP46P62068 366 aa11.55□□□□□ -0.56
CCDC149-206ENST00000508236 VAC14Q08AM6 782 aa11.55□□□□□ -0.56
CCDC149-206ENST00000508236 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
CCDC149-206ENST00000508236 CUX2O14529 1486 aa11.55□□□□□ -0.56
CCDC149-206ENST00000508236 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 GPR37L1O60883 481 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 TATDN2Q93075 761 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
CCDC149-206ENST00000508236 CARNS1A5YM72 827 aa11.53□□□□□ -0.56
CCDC149-206ENST00000508236 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
CCDC149-206ENST00000508236 FDX1P10109 184 aa11.53□□□□□ -0.56
CCDC149-206ENST00000508236 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC149-206ENST00000508236 ALG2Q9H553 416 aa11.53□□□□□ -0.56
CCDC149-206ENST00000508236 IGF1RP08069 1367 aa11.53□□□□□ -0.56
CCDC149-206ENST00000508236 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.56
CCDC149-206ENST00000508236 HOXA2O43364 376 aa11.52□□□□□ -0.57
CCDC149-206ENST00000508236 ARSIQ5FYB1 569 aa11.52□□□□□ -0.57
CCDC149-206ENST00000508236 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
CCDC149-206ENST00000508236 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
CCDC149-206ENST00000508236 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
CCDC149-206ENST00000508236 ARHGAP35Q9NRY4 1499 aa11.51□□□□□ -0.57
CCDC149-206ENST00000508236 PPP1R3GB7ZBB8 358 aa11.5□□□□□ -0.57
CCDC149-206ENST00000508236 E9PSI1 815 aa11.5□□□□□ -0.57
CCDC149-206ENST00000508236 GCGRP47871 477 aa11.5□□□□□ -0.57
CCDC149-206ENST00000508236 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
CCDC149-206ENST00000508236 IVNS1ABPQ9Y6Y0 642 aa11.5□□□□□ -0.57
CCDC149-206ENST00000508236 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
CCDC149-206ENST00000508236 VRTNQ9H8Y1 702 aa11.49□□□□□ -0.57
CCDC149-206ENST00000508236 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
CCDC149-206ENST00000508236 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
CCDC149-206ENST00000508236 PCDHGC3Q9UN70 934 aa11.49□□□□□ -0.57
CCDC149-206ENST00000508236 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
CCDC149-206ENST00000508236 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
CCDC149-206ENST00000508236 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
CCDC149-206ENST00000508236 PPP4R3BQ5MIZ7 849 aa11.48□□□□□ -0.57
CCDC149-206ENST00000508236 RSPH4AQ5TD94 716 aa11.48□□□□□ -0.57
CCDC149-206ENST00000508236 MAP3K1Q13233 1512 aa11.48□□□□□ -0.57
CCDC149-206ENST00000508236 LRRN4Q8WUT4 740 aa11.47□□□□□ -0.57
CCDC149-206ENST00000508236 UCN2Q96RP3 112 aa11.47□□□□□ -0.57
CCDC149-206ENST00000508236 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 ATG7O95352 703 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 PTPREP23469 700 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 SOX11P35716 441 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 MTMR2Q13614 643 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 DOK7Q18PE1 504 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
CCDC149-206ENST00000508236 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 GUCA2AQ02747 115 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 SND1Q7KZF4 910 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC149-206ENST00000508236 TSC1Q92574 1164 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 LHX6Q9UPM6 363 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 CUL7Q14999 1698 aa11.45□□□□□ -0.58
CCDC149-206ENST00000508236 RRBP1Q9P2E9 1410 aaKnown RBP11.44□□□□□ -0.58
CCDC149-206ENST00000508236 SMAPO00193 183 aa11.44□□□□□ -0.58
CCDC149-206ENST00000508236 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
CCDC149-206ENST00000508236 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
CCDC149-206ENST00000508236 PRR7Q8TB68 274 aa11.44□□□□□ -0.58
CCDC149-206ENST00000508236 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
CCDC149-206ENST00000508236 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
CCDC149-206ENST00000508236 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
CCDC149-206ENST00000508236 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
CCDC149-206ENST00000508236 HLA-CQ95604 372 aa11.43□□□□□ -0.58
CCDC149-206ENST00000508236 PSDA5PKW4 1024 aaPredicted RBP11.42□□□□□ -0.58
CCDC149-206ENST00000508236 KANK4Q5T7N3 995 aaPredicted RBP11.42□□□□□ -0.58
CCDC149-206ENST00000508236 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
CCDC149-206ENST00000508236 MAFBQ9Y5Q3 323 aaPredicted RBP11.42□□□□□ -0.58
CCDC149-206ENST00000508236 TIAM1Q13009 1591 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms