RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
CCDC149-206ENST00000508236 AEBP2Q6ZN18 517 aaPredicted RBP23.83■■□□□ 1.41
CCDC149-206ENST00000508236 PHF23Q9BUL5 403 aaPredicted RBP21.51■■□□□ 1.03
CCDC149-206ENST00000508236 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
CCDC149-206ENST00000508236 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
CCDC149-206ENST00000508236 ADRA2BP18089 450 aa18.92■□□□□ 0.62
CCDC149-206ENST00000508236 EHMT2Q96KQ7 1210 aa18.82■□□□□ 0.6
CCDC149-206ENST00000508236 KCNA4P22459 653 aa18.78■□□□□ 0.6
CCDC149-206ENST00000508236 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
CCDC149-206ENST00000508236 FOXD1Q16676 465 aa18.47■□□□□ 0.55
CCDC149-206ENST00000508236 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
CCDC149-206ENST00000508236 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.48
CCDC149-206ENST00000508236 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
CCDC149-206ENST00000508236 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
CCDC149-206ENST00000508236 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
CCDC149-206ENST00000508236 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
CCDC149-206ENST00000508236 ZBTB22O15209 634 aa17.3■□□□□ 0.36
CCDC149-206ENST00000508236 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
CCDC149-206ENST00000508236 SCAF1Q9H7N4 1312 aaKnown RBP17.07■□□□□ 0.32
CCDC149-206ENST00000508236 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
CCDC149-206ENST00000508236 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
CCDC149-206ENST00000508236 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
CCDC149-206ENST00000508236 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
CCDC149-206ENST00000508236 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
CCDC149-206ENST00000508236 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
CCDC149-206ENST00000508236 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
CCDC149-206ENST00000508236 MSH5O43196 834 aa16.59■□□□□ 0.25
CCDC149-206ENST00000508236 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
CCDC149-206ENST00000508236 FKBP8Q14318 412 aa16.29■□□□□ 0.2
CCDC149-206ENST00000508236 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
CCDC149-206ENST00000508236 NISCHQ9Y2I1 1504 aa16.27■□□□□ 0.2
CCDC149-206ENST00000508236 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
CCDC149-206ENST00000508236 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
CCDC149-206ENST00000508236 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
CCDC149-206ENST00000508236 ATF5Q9Y2D1 282 aaPredicted RBP15.69■□□□□ 0.1
CCDC149-206ENST00000508236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
CCDC149-206ENST00000508236 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
CCDC149-206ENST00000508236 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
CCDC149-206ENST00000508236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCDC149-206ENST00000508236 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
CCDC149-206ENST00000508236 PLCB2Q00722 1185 aa15.41■□□□□ 0.06
CCDC149-206ENST00000508236 FBXO3Q9UK99 471 aa15.4■□□□□ 0.06
CCDC149-206ENST00000508236 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
CCDC149-206ENST00000508236 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
CCDC149-206ENST00000508236 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
CCDC149-206ENST00000508236 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
CCDC149-206ENST00000508236 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
CCDC149-206ENST00000508236 PROM2Q8N271 834 aa15.13■□□□□ 0.01
CCDC149-206ENST00000508236 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
CCDC149-206ENST00000508236 APLP2Q06481 763 aa15.11■□□□□ 0.01
CCDC149-206ENST00000508236 BCANQ96GW7 911 aa15.08■□□□□ 0
CCDC149-206ENST00000508236 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
CCDC149-206ENST00000508236 IFNLR1Q8IU57 520 aaPredicted RBP15.05■□□□□ -0
CCDC149-206ENST00000508236 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
CCDC149-206ENST00000508236 PKD2Q13563 968 aa14.97□□□□□ -0.01
CCDC149-206ENST00000508236 PRKCSHP14314 528 aaPredicted RBP14.96□□□□□ -0.01
CCDC149-206ENST00000508236 FBLN2P98095 1184 aa14.94□□□□□ -0.02
CCDC149-206ENST00000508236 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
CCDC149-206ENST00000508236 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.79□□□□□ -0.04
CCDC149-206ENST00000508236 BBXQ8WY36 941 aaPredicted RBP14.77□□□□□ -0.05
CCDC149-206ENST00000508236 KDM2AQ9Y2K7 1162 aa14.73□□□□□ -0.05
CCDC149-206ENST00000508236 POLA2Q14181 598 aa14.72□□□□□ -0.05
CCDC149-206ENST00000508236 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
CCDC149-206ENST00000508236 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
CCDC149-206ENST00000508236 ECM2O94769 699 aaPredicted RBP14.68□□□□□ -0.06
CCDC149-206ENST00000508236 TPRNQ4KMQ1 711 aa14.68□□□□□ -0.06
CCDC149-206ENST00000508236 PAXIP1Q6ZW49 1069 aaPredicted RBP14.68□□□□□ -0.06
CCDC149-206ENST00000508236 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
CCDC149-206ENST00000508236 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCDC149-206ENST00000508236 CFAP44Q96MT7 982 aa14.64□□□□□ -0.07
CCDC149-206ENST00000508236 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
CCDC149-206ENST00000508236 POTEDQ86YR6 584 aa14.58□□□□□ -0.08
CCDC149-206ENST00000508236 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
CCDC149-206ENST00000508236 CAPN15O75808 1086 aa14.52□□□□□ -0.09
CCDC149-206ENST00000508236 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.09
CCDC149-206ENST00000508236 RGL2O15211 777 aa14.51□□□□□ -0.09
CCDC149-206ENST00000508236 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
CCDC149-206ENST00000508236 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
CCDC149-206ENST00000508236 PLCD3Q8N3E9 789 aa14.44□□□□□ -0.1
CCDC149-206ENST00000508236 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
CCDC149-206ENST00000508236 ABCB7O75027 752 aa14.35□□□□□ -0.11
CCDC149-206ENST00000508236 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
CCDC149-206ENST00000508236 MIER1Q8N108 512 aa14.34□□□□□ -0.11
CCDC149-206ENST00000508236 RNF39Q9H2S5 420 aa14.33□□□□□ -0.12
CCDC149-206ENST00000508236 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
CCDC149-206ENST00000508236 NBR1Q14596 966 aa14.27□□□□□ -0.13
CCDC149-206ENST00000508236 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.13
CCDC149-206ENST00000508236 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
CCDC149-206ENST00000508236 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
CCDC149-206ENST00000508236 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
CCDC149-206ENST00000508236 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
CCDC149-206ENST00000508236 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
CCDC149-206ENST00000508236 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC149-206ENST00000508236 ZBTB47Q9UFB7 747 aaPredicted RBP14.19□□□□□ -0.14
CCDC149-206ENST00000508236 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
CCDC149-206ENST00000508236 HS6ST3Q8IZP7 471 aa14.17□□□□□ -0.14
CCDC149-206ENST00000508236 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
CCDC149-206ENST00000508236 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
CCDC149-206ENST00000508236 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
CCDC149-206ENST00000508236 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms