RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
COL4A5-207ENST00000504541 USP46P62068 366 aa10□□□□□ -0.81
COL4A5-207ENST00000504541 KCNC4Q03721 635 aa10□□□□□ -0.81
COL4A5-207ENST00000504541 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
COL4A5-207ENST00000504541 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
COL4A5-207ENST00000504541 NRG2O14511 850 aaPredicted RBP9.99□□□□□ -0.81
COL4A5-207ENST00000504541 APLP1P51693 650 aa9.99□□□□□ -0.81
COL4A5-207ENST00000504541 POLR3EQ9NVU0 708 aa9.99□□□□□ -0.81
COL4A5-207ENST00000504541 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
COL4A5-207ENST00000504541 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
COL4A5-207ENST00000504541 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
COL4A5-207ENST00000504541 FUT2Q10981 343 aa9.98□□□□□ -0.81
COL4A5-207ENST00000504541 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
COL4A5-207ENST00000504541 PCDHB3Q9Y5E6 796 aa9.98□□□□□ -0.81
COL4A5-207ENST00000504541 RIC3Q7Z5B4 369 aa9.96□□□□□ -0.82
COL4A5-207ENST00000504541 FANCD2Q9BXW9 1451 aa9.96□□□□□ -0.82
COL4A5-207ENST00000504541 ABCC8Q09428 1581 aa9.96□□□□□ -0.82
COL4A5-207ENST00000504541 NDUFV2P19404 249 aa9.95□□□□□ -0.82
COL4A5-207ENST00000504541 SKIV2LQ15477 1246 aaKnown RBP9.95□□□□□ -0.82
COL4A5-207ENST00000504541 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
COL4A5-207ENST00000504541 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
COL4A5-207ENST00000504541 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
COL4A5-207ENST00000504541 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
COL4A5-207ENST00000504541 HOXA2O43364 376 aa9.93□□□□□ -0.82
COL4A5-207ENST00000504541 SH3D19Q5HYK7 790 aa9.93□□□□□ -0.82
COL4A5-207ENST00000504541 NESP48681 1621 aa9.93□□□□□ -0.82
COL4A5-207ENST00000504541 NR1I2O75469 434 aa9.92□□□□□ -0.82
COL4A5-207ENST00000504541 FDX1P10109 184 aa9.92□□□□□ -0.82
COL4A5-207ENST00000504541 COPS2P61201 443 aa9.92□□□□□ -0.82
COL4A5-207ENST00000504541 CSPP1Q1MSJ5 1256 aa9.92□□□□□ -0.82
COL4A5-207ENST00000504541 CLK2P49760 499 aaKnown RBP9.91□□□□□ -0.82
COL4A5-207ENST00000504541 SPTLC1O15269 473 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 MORN1Q5T089 497 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 RSBN1LQ6PCB5 846 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-207ENST00000504541 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 SCUBE3Q8IX30 993 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 PROCA1Q8NCQ7 364 aaPredicted RBP9.9□□□□□ -0.82
COL4A5-207ENST00000504541 HLA-CQ95604 372 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 GOPCQ9HD26 462 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 SLC27A5Q9Y2P5 690 aa9.9□□□□□ -0.82
COL4A5-207ENST00000504541 CEP164Q9UPV0 1460 aa9.9□□□□□ -0.83
COL4A5-207ENST00000504541 NUTM2BA6NNL0 878 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-207ENST00000504541 NUTM2EB1AL46 878 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-207ENST00000504541 GUCA2AQ02747 115 aa9.89□□□□□ -0.83
COL4A5-207ENST00000504541 Q3C1V9 767 aa9.89□□□□□ -0.83
COL4A5-207ENST00000504541 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-207ENST00000504541 NUTM2AQ8IVF1 878 aaPredicted RBP9.89□□□□□ -0.83
COL4A5-207ENST00000504541 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
COL4A5-207ENST00000504541 C6orf229H3BNL8 230 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 GJA5P36382 358 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 MTRQ99707 1265 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 IL21Q9HBE4 155 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 TOP2BQ02880 1626 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 EEA1Q15075 1411 aa9.88□□□□□ -0.83
COL4A5-207ENST00000504541 PRKD2Q9BZL6 878 aa9.87□□□□□ -0.83
COL4A5-207ENST00000504541 PCDHB15Q9Y5E8 787 aa9.87□□□□□ -0.83
COL4A5-207ENST00000504541 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
COL4A5-207ENST00000504541 PCDHGC3Q9UN70 934 aa9.85□□□□□ -0.83
COL4A5-207ENST00000504541 CUX1P39880 1505 aa9.84□□□□□ -0.83
COL4A5-207ENST00000504541 ZPR1O75312 459 aa9.84□□□□□ -0.83
COL4A5-207ENST00000504541 TJAP1Q5JTD0 557 aa9.84□□□□□ -0.83
COL4A5-207ENST00000504541 ZNF516Q92618 1163 aa9.84□□□□□ -0.83
COL4A5-207ENST00000504541 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
COL4A5-207ENST00000504541 BIVM-ERCC5R4GMW8 1640 aa9.83□□□□□ -0.84
COL4A5-207ENST00000504541 MTMR2Q13614 643 aa9.83□□□□□ -0.84
COL4A5-207ENST00000504541 TUSC1Q2TAM9 212 aa9.83□□□□□ -0.84
COL4A5-207ENST00000504541 SYMPKQ92797 1274 aaKnown RBP9.83□□□□□ -0.84
COL4A5-207ENST00000504541 SYNJ1O43426 1573 aa9.83□□□□□ -0.84
COL4A5-207ENST00000504541 DNMBPQ6XZF7 1577 aa9.83□□□□□ -0.84
COL4A5-207ENST00000504541 TOPBP1Q92547 1522 aa9.82□□□□□ -0.84
COL4A5-207ENST00000504541 PRPF38BQ5VTL8 546 aaKnown RBP9.82□□□□□ -0.84
COL4A5-207ENST00000504541 BRICD5Q6PL45 260 aa9.82□□□□□ -0.84
COL4A5-207ENST00000504541 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
COL4A5-207ENST00000504541 SPSB2Q99619 263 aa9.82□□□□□ -0.84
COL4A5-207ENST00000504541 MRC2Q9UBG0 1479 aa9.82□□□□□ -0.84
COL4A5-207ENST00000504541 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
COL4A5-207ENST00000504541 HRCP23327 699 aa9.81□□□□□ -0.84
COL4A5-207ENST00000504541 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
COL4A5-207ENST00000504541 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
COL4A5-207ENST00000504541 ERCC6Q03468 1493 aa9.8□□□□□ -0.84
COL4A5-207ENST00000504541 LILRB3O75022 631 aa9.8□□□□□ -0.84
COL4A5-207ENST00000504541 QPCTQ16769 361 aa9.8□□□□□ -0.84
COL4A5-207ENST00000504541 RNF19BQ6ZMZ0 732 aa9.8□□□□□ -0.84
COL4A5-207ENST00000504541 TSC1Q92574 1164 aa9.8□□□□□ -0.84
COL4A5-207ENST00000504541 USB1Q9BQ65 265 aaKnown RBP9.8□□□□□ -0.84
COL4A5-207ENST00000504541 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
COL4A5-207ENST00000504541 URB2Q14146 1524 aaKnown RBP9.8□□□□□ -0.84
COL4A5-207ENST00000504541 SOGA1O94964 1423 aa9.8□□□□□ -0.84
COL4A5-207ENST00000504541 RTL5Q5HYW3 569 aaPredicted RBP9.78□□□□□ -0.84
COL4A5-207ENST00000504541 RETREG3Q86VR2 466 aa9.78□□□□□ -0.84
COL4A5-207ENST00000504541 KIF27Q86VH2 1401 aa9.78□□□□□ -0.84
COL4A5-207ENST00000504541 TLL1O43897 1013 aa9.77□□□□□ -0.85
COL4A5-207ENST00000504541 ADH1BP00325 375 aa9.77□□□□□ -0.85
COL4A5-207ENST00000504541 PRR7Q8TB68 274 aa9.77□□□□□ -0.85
COL4A5-207ENST00000504541 THAP11Q96EK4 314 aa9.77□□□□□ -0.85
COL4A5-207ENST00000504541 PDZRN3Q9UPQ7 1066 aa9.77□□□□□ -0.85
COL4A5-207ENST00000504541 POLA1P09884 1462 aaPredicted RBP9.77□□□□□ -0.85
COL4A5-207ENST00000504541 FGD5Q6ZNL6 1462 aa9.77□□□□□ -0.85
COL4A5-207ENST00000504541 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms