RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
COL4A5-207ENST00000504541 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
COL4A5-207ENST00000504541 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
COL4A5-207ENST00000504541 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
COL4A5-207ENST00000504541 FOXD1Q16676 465 aa21.13■□□□□ 0.97
COL4A5-207ENST00000504541 POTEDQ86YR6 584 aa21.07■□□□□ 0.96
COL4A5-207ENST00000504541 MSH5O43196 834 aa20.07■□□□□ 0.8
COL4A5-207ENST00000504541 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
COL4A5-207ENST00000504541 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
COL4A5-207ENST00000504541 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
COL4A5-207ENST00000504541 ADRA2BP18089 450 aa18.98■□□□□ 0.63
COL4A5-207ENST00000504541 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
COL4A5-207ENST00000504541 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
COL4A5-207ENST00000504541 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
COL4A5-207ENST00000504541 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
COL4A5-207ENST00000504541 RNF39Q9H2S5 420 aa17.07■□□□□ 0.32
COL4A5-207ENST00000504541 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
COL4A5-207ENST00000504541 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
COL4A5-207ENST00000504541 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
COL4A5-207ENST00000504541 C1QBPQ07021 282 aaKnown RBP16.75■□□□□ 0.27
COL4A5-207ENST00000504541 KCNA4P22459 653 aa16.52■□□□□ 0.24
COL4A5-207ENST00000504541 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
COL4A5-207ENST00000504541 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
COL4A5-207ENST00000504541 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
COL4A5-207ENST00000504541 POTEHQ6S545 545 aa16.33■□□□□ 0.2
COL4A5-207ENST00000504541 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
COL4A5-207ENST00000504541 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
COL4A5-207ENST00000504541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL4A5-207ENST00000504541 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
COL4A5-207ENST00000504541 DSG3P32926 999 aa15.7■□□□□ 0.1
COL4A5-207ENST00000504541 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
COL4A5-207ENST00000504541 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
COL4A5-207ENST00000504541 CAPN15O75808 1086 aa15.54■□□□□ 0.08
COL4A5-207ENST00000504541 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
COL4A5-207ENST00000504541 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.03
COL4A5-207ENST00000504541 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
COL4A5-207ENST00000504541 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
COL4A5-207ENST00000504541 ZBTB22O15209 634 aa15.13■□□□□ 0.01
COL4A5-207ENST00000504541 ABCB7O75027 752 aa15.13■□□□□ 0.01
COL4A5-207ENST00000504541 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
COL4A5-207ENST00000504541 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
COL4A5-207ENST00000504541 CHRDL2Q6WN34 429 aa14.99□□□□□ -0.01
COL4A5-207ENST00000504541 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
COL4A5-207ENST00000504541 APLP2Q06481 763 aa14.94□□□□□ -0.02
COL4A5-207ENST00000504541 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
COL4A5-207ENST00000504541 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
COL4A5-207ENST00000504541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
COL4A5-207ENST00000504541 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
COL4A5-207ENST00000504541 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
COL4A5-207ENST00000504541 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
COL4A5-207ENST00000504541 POLA2Q14181 598 aa14.51□□□□□ -0.09
COL4A5-207ENST00000504541 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
COL4A5-207ENST00000504541 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
COL4A5-207ENST00000504541 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
COL4A5-207ENST00000504541 HAX1O00165 279 aa14.4□□□□□ -0.1
COL4A5-207ENST00000504541 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-207ENST00000504541 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL4A5-207ENST00000504541 EVX2Q03828 476 aa14.22□□□□□ -0.13
COL4A5-207ENST00000504541 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
COL4A5-207ENST00000504541 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
COL4A5-207ENST00000504541 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
COL4A5-207ENST00000504541 FBLN2P98095 1184 aa13.98□□□□□ -0.17
COL4A5-207ENST00000504541 LHX8Q68G74 356 aa13.96□□□□□ -0.17
COL4A5-207ENST00000504541 C19orf67A6NJJ6 358 aa13.83□□□□□ -0.2
COL4A5-207ENST00000504541 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
COL4A5-207ENST00000504541 GABBR2O75899 941 aa13.82□□□□□ -0.2
COL4A5-207ENST00000504541 FKBP8Q14318 412 aa13.81□□□□□ -0.2
COL4A5-207ENST00000504541 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
COL4A5-207ENST00000504541 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
COL4A5-207ENST00000504541 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
COL4A5-207ENST00000504541 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
COL4A5-207ENST00000504541 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
COL4A5-207ENST00000504541 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
COL4A5-207ENST00000504541 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
COL4A5-207ENST00000504541 SPDYE1Q8NFV5 336 aaPredicted RBP13.61□□□□□ -0.23
COL4A5-207ENST00000504541 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
COL4A5-207ENST00000504541 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
COL4A5-207ENST00000504541 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
COL4A5-207ENST00000504541 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
COL4A5-207ENST00000504541 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
COL4A5-207ENST00000504541 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL4A5-207ENST00000504541 PROM2Q8N271 834 aa13.32□□□□□ -0.28
COL4A5-207ENST00000504541 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
COL4A5-207ENST00000504541 CD44P16070 742 aaKnown RBP13.31□□□□□ -0.28
COL4A5-207ENST00000504541 CLCN6P51797 869 aa13.27□□□□□ -0.29
COL4A5-207ENST00000504541 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
COL4A5-207ENST00000504541 DCBLD2Q96PD2 775 aa13.23□□□□□ -0.29
COL4A5-207ENST00000504541 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
COL4A5-207ENST00000504541 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
COL4A5-207ENST00000504541 POTEMA6NI47 508 aa13.19□□□□□ -0.3
COL4A5-207ENST00000504541 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
COL4A5-207ENST00000504541 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
COL4A5-207ENST00000504541 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
COL4A5-207ENST00000504541 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
COL4A5-207ENST00000504541 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-207ENST00000504541 MIER1Q8N108 512 aa13.03□□□□□ -0.32
COL4A5-207ENST00000504541 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
COL4A5-207ENST00000504541 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
COL4A5-207ENST00000504541 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
COL4A5-207ENST00000504541 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms