RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 MAP2K5Q13163 448 aa11.37□□□□□ -0.59
CRNDE-201ENST00000501177 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
CRNDE-201ENST00000501177 SPSB2Q99619 263 aa11.37□□□□□ -0.59
CRNDE-201ENST00000501177 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
CRNDE-201ENST00000501177 TRAF7Q6Q0C0 670 aa11.36□□□□□ -0.59
CRNDE-201ENST00000501177 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
CRNDE-201ENST00000501177 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
CRNDE-201ENST00000501177 IRF6O14896 467 aa11.34□□□□□ -0.59
CRNDE-201ENST00000501177 ATP6V1AP38606 617 aa11.34□□□□□ -0.59
CRNDE-201ENST00000501177 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
CRNDE-201ENST00000501177 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
CRNDE-201ENST00000501177 CHD1O14646 1710 aa11.33□□□□□ -0.6
CRNDE-201ENST00000501177 RSF1Q96T23 1441 aaPredicted RBP11.33□□□□□ -0.6
CRNDE-201ENST00000501177 FAM160A2Q8N612 972 aaPredicted RBP11.32□□□□□ -0.6
CRNDE-201ENST00000501177 ABCC8Q09428 1581 aa11.32□□□□□ -0.6
CRNDE-201ENST00000501177 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
CRNDE-201ENST00000501177 ARAP1Q96P48 1450 aa11.31□□□□□ -0.6
CRNDE-201ENST00000501177 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
CRNDE-201ENST00000501177 CD46P15529 392 aa11.3□□□□□ -0.6
CRNDE-201ENST00000501177 MDM2Q00987 491 aaPredicted RBP11.3□□□□□ -0.6
CRNDE-201ENST00000501177 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
CRNDE-201ENST00000501177 PRDM9Q9NQV7 894 aa11.3□□□□□ -0.6
CRNDE-201ENST00000501177 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
CRNDE-201ENST00000501177 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
CRNDE-201ENST00000501177 CYB5RLQ6IPT4 315 aa11.29□□□□□ -0.6
CRNDE-201ENST00000501177 RNF19BQ6ZMZ0 732 aa11.29□□□□□ -0.6
CRNDE-201ENST00000501177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
CRNDE-201ENST00000501177 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
CRNDE-201ENST00000501177 BRICD5Q6PL45 260 aa11.28□□□□□ -0.6
CRNDE-201ENST00000501177 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
CRNDE-201ENST00000501177 GDF9O60383 454 aa11.26□□□□□ -0.61
CRNDE-201ENST00000501177 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
CRNDE-201ENST00000501177 FCF1Q9Y324 198 aaKnown RBP11.26□□□□□ -0.61
CRNDE-201ENST00000501177 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
CRNDE-201ENST00000501177 HLA-CQ95604 372 aa11.25□□□□□ -0.61
CRNDE-201ENST00000501177 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
CRNDE-201ENST00000501177 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
CRNDE-201ENST00000501177 PRR20EP86478 221 aa11.24□□□□□ -0.61
CRNDE-201ENST00000501177 PRR20CP86479 221 aa11.24□□□□□ -0.61
CRNDE-201ENST00000501177 PRR20DP86480 221 aa11.24□□□□□ -0.61
CRNDE-201ENST00000501177 PRR20BP86481 221 aa11.24□□□□□ -0.61
CRNDE-201ENST00000501177 PRR20AP86496 221 aa11.24□□□□□ -0.61
CRNDE-201ENST00000501177 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
CRNDE-201ENST00000501177 KDM4AO75164 1064 aa11.22□□□□□ -0.61
CRNDE-201ENST00000501177 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
CRNDE-201ENST00000501177 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
CRNDE-201ENST00000501177 REPIN1Q9BWE0 567 aaKnown RBP11.21□□□□□ -0.61
CRNDE-201ENST00000501177 MSS51Q4VC12 460 aa11.2□□□□□ -0.62
CRNDE-201ENST00000501177 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
CRNDE-201ENST00000501177 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
CRNDE-201ENST00000501177 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
CRNDE-201ENST00000501177 RPIAP49247 311 aa11.18□□□□□ -0.62
CRNDE-201ENST00000501177 MYT1Q01538 1121 aa11.18□□□□□ -0.62
CRNDE-201ENST00000501177 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
CRNDE-201ENST00000501177 CCDC88BA6NC98 1476 aa11.18□□□□□ -0.62
CRNDE-201ENST00000501177 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.622e-8■■■■□ 22.7
CRNDE-201ENST00000501177 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
CRNDE-201ENST00000501177 HOXA2O43364 376 aa11.17□□□□□ -0.62
CRNDE-201ENST00000501177 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
CRNDE-201ENST00000501177 FOXC1Q12948 553 aa11.17□□□□□ -0.62
CRNDE-201ENST00000501177 CLCN1P35523 988 aa11.16□□□□□ -0.62
CRNDE-201ENST00000501177 PKDCCQ504Y2 493 aa11.16□□□□□ -0.62
CRNDE-201ENST00000501177 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
CRNDE-201ENST00000501177 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
CRNDE-201ENST00000501177 DGAT1O75907 488 aa11.15□□□□□ -0.62
CRNDE-201ENST00000501177 Q3C1V9 767 aa11.15□□□□□ -0.62
CRNDE-201ENST00000501177 MMP16P51512 607 aa11.14□□□□□ -0.63
CRNDE-201ENST00000501177 ZMYND10O75800 440 aa11.13□□□□□ -0.63
CRNDE-201ENST00000501177 USP46P62068 366 aa11.13□□□□□ -0.63
CRNDE-201ENST00000501177 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
CRNDE-201ENST00000501177 USB1Q9BQ65 265 aaKnown RBP11.13□□□□□ -0.63
CRNDE-201ENST00000501177 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
CRNDE-201ENST00000501177 ZNF787Q6DD87 383 aa11.12□□□□□ -0.63
CRNDE-201ENST00000501177 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
CRNDE-201ENST00000501177 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
CRNDE-201ENST00000501177 DXOO77932 396 aaKnown RBP11.11□□□□□ -0.63
CRNDE-201ENST00000501177 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
CRNDE-201ENST00000501177 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
CRNDE-201ENST00000501177 POTECB2RU33 542 aa11.1□□□□□ -0.63
CRNDE-201ENST00000501177 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
CRNDE-201ENST00000501177 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
CRNDE-201ENST00000501177 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
CRNDE-201ENST00000501177 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
CRNDE-201ENST00000501177 SSTR3P32745 418 aaPredicted RBP11.07□□□□□ -0.64
CRNDE-201ENST00000501177 PCDHGC3Q9UN70 934 aa11.07□□□□□ -0.64
CRNDE-201ENST00000501177 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 TRIM32Q13049 653 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 SOGA1O94964 1423 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
CRNDE-201ENST00000501177 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
CRNDE-201ENST00000501177 AMHR2Q16671 573 aa11.05□□□□□ -0.64
CRNDE-201ENST00000501177 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
CRNDE-201ENST00000501177 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CRNDE-201ENST00000501177 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
CRNDE-201ENST00000501177 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
CRNDE-201ENST00000501177 SPIRE2Q8WWL2 714 aa11.04□□□□□ -0.64
CRNDE-201ENST00000501177 CYP4X1Q8N118 509 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms