RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
LRRC55-201ENST00000497933 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
LRRC55-201ENST00000497933 ACBD3Q9H3P7 528 aa13.67□□□□□ -0.22
LRRC55-201ENST00000497933 FKBP5Q13451 457 aaPredicted RBP13.67□□□□□ -0.22
LRRC55-201ENST00000497933 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
LRRC55-201ENST00000497933 FOXD4L6Q3SYB3 417 aaPredicted RBP13.66□□□□□ -0.22
LRRC55-201ENST00000497933 FOXD4L3Q6VB84 417 aaPredicted RBP13.66□□□□□ -0.22
LRRC55-201ENST00000497933 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
LRRC55-201ENST00000497933 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
LRRC55-201ENST00000497933 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
LRRC55-201ENST00000497933 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
LRRC55-201ENST00000497933 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
LRRC55-201ENST00000497933 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
LRRC55-201ENST00000497933 TSPYL4Q9UJ04 414 aa13.65□□□□□ -0.22
LRRC55-201ENST00000497933 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
LRRC55-201ENST00000497933 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
LRRC55-201ENST00000497933 MARCH6O60337 910 aa13.65□□□□□ -0.22
LRRC55-201ENST00000497933 AMOTL1Q8IY63 956 aa13.65□□□□□ -0.22
LRRC55-201ENST00000497933 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.23
LRRC55-201ENST00000497933 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.23
LRRC55-201ENST00000497933 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
LRRC55-201ENST00000497933 NLRP6P59044 892 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 CDR1P51861 262 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 CCDC47Q96A33 483 aaKnown RBP13.63□□□□□ -0.23
LRRC55-201ENST00000497933 GPRASP1Q5JY77 1395 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 RNF20Q5VTR2 975 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 BICD2Q8TD16 824 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
LRRC55-201ENST00000497933 INTS3Q68E01 1043 aaKnown RBP13.62□□□□□ -0.23
LRRC55-201ENST00000497933 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 TROQ12816 1431 aaPredicted RBP13.62□□□□□ -0.23
LRRC55-201ENST00000497933 HMGN5P82970 282 aaKnown RBP13.62□□□□□ -0.23
LRRC55-201ENST00000497933 PDE4CQ08493 712 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 CFAP70Q5T0N1 1121 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 MNS1Q8NEH6 495 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 TRIM29Q14134 588 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 EHBP1L1Q8N3D4 1523 aa13.62□□□□□ -0.23
LRRC55-201ENST00000497933 SCAPERQ9BY12 1400 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 AK7Q96M32 723 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 IFT57Q9NWB7 429 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 PRXQ9BXM0 1461 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
LRRC55-201ENST00000497933 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
LRRC55-201ENST00000497933 C9orf84Q5VXU9 1444 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
LRRC55-201ENST00000497933 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 ERC2O15083 957 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 HMOX1P09601 288 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 MTHFSP49914 203 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
LRRC55-201ENST00000497933 ESPNB1AK53 854 aa13.6□□□□□ -0.23
LRRC55-201ENST00000497933 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
LRRC55-201ENST00000497933 TRDNQ13061 729 aa13.59□□□□□ -0.23
LRRC55-201ENST00000497933 ANO2Q9NQ90 1003 aa13.59□□□□□ -0.23
LRRC55-201ENST00000497933 KIAA1107Q9UPP5 1409 aa13.59□□□□□ -0.23
LRRC55-201ENST00000497933 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
LRRC55-201ENST00000497933 RUFY1Q96T51 708 aa13.59□□□□□ -0.23
LRRC55-201ENST00000497933 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
LRRC55-201ENST00000497933 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
LRRC55-201ENST00000497933 CCDC73Q6ZRK6 1079 aa13.58□□□□□ -0.23
LRRC55-201ENST00000497933 VPS37DQ86XT2 251 aa13.58□□□□□ -0.23
LRRC55-201ENST00000497933 UQCRHLA0A096LP55 91 aa13.58□□□□□ -0.24
LRRC55-201ENST00000497933 UQCRHP07919 91 aa13.58□□□□□ -0.24
LRRC55-201ENST00000497933 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
LRRC55-201ENST00000497933 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
LRRC55-201ENST00000497933 CPLX1O14810 134 aa13.58□□□□□ -0.24
LRRC55-201ENST00000497933 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
LRRC55-201ENST00000497933 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
LRRC55-201ENST00000497933 RIC3Q7Z5B4 369 aa13.57□□□□□ -0.24
LRRC55-201ENST00000497933 PCMTD1Q96MG8 357 aaPredicted RBP13.57□□□□□ -0.24
LRRC55-201ENST00000497933 MBD3O95983 291 aa13.57□□□□□ -0.24
LRRC55-201ENST00000497933 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
LRRC55-201ENST00000497933 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
LRRC55-201ENST00000497933 RNF214Q8ND24 703 aa13.57□□□□□ -0.24
LRRC55-201ENST00000497933 WWC1Q8IX03 1113 aa13.57□□□□□ -0.24
LRRC55-201ENST00000497933 NAT10Q9H0A0 1025 aaKnown RBP13.57□□□□□ -0.24
LRRC55-201ENST00000497933 PRM3Q9NNZ6 103 aa13.57□□□□□ -0.24
LRRC55-201ENST00000497933 RPGRIP1LQ68CZ1 1315 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 NESP48681 1621 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 APPP05067 770 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 TCP11L2Q8N4U5 519 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
LRRC55-201ENST00000497933 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
LRRC55-201ENST00000497933 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 GNAI3P08754 354 aa13.56□□□□□ -0.24
LRRC55-201ENST00000497933 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
LRRC55-201ENST00000497933 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms