RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ADGRD1Q6QNK2 874 aa10.58□□□□□ -0.72
RTFDC1-209ENST00000487211 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-209ENST00000487211 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
RTFDC1-209ENST00000487211 PRDM2Q13029 1718 aa10.57□□□□□ -0.72
RTFDC1-209ENST00000487211 KIF13AQ9H1H9 1805 aa10.56□□□□□ -0.72
RTFDC1-209ENST00000487211 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
RTFDC1-209ENST00000487211 USP46P62068 366 aa10.55□□□□□ -0.72
RTFDC1-209ENST00000487211 TUSC1Q2TAM9 212 aa10.55□□□□□ -0.72
RTFDC1-209ENST00000487211 FBXO31Q5XUX0 539 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-209ENST00000487211 HOXA2O43364 376 aa10.54□□□□□ -0.72
RTFDC1-209ENST00000487211 RFC5P40937 340 aa10.54□□□□□ -0.72
RTFDC1-209ENST00000487211 ANKRD13DQ6ZTN6 518 aa10.54□□□□□ -0.72
RTFDC1-209ENST00000487211 STAC3Q96MF2 364 aa10.54□□□□□ -0.72
RTFDC1-209ENST00000487211 PCDHB15Q9Y5E8 787 aa10.54□□□□□ -0.72
RTFDC1-209ENST00000487211 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
RTFDC1-209ENST00000487211 CFHP08603 1231 aa10.53□□□□□ -0.72
RTFDC1-209ENST00000487211 GJA5P36382 358 aa10.53□□□□□ -0.72
RTFDC1-209ENST00000487211 MCM6Q14566 821 aa10.53□□□□□ -0.72
RTFDC1-209ENST00000487211 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
RTFDC1-209ENST00000487211 FDX1P10109 184 aa10.52□□□□□ -0.73
RTFDC1-209ENST00000487211 QPCTQ16769 361 aa10.52□□□□□ -0.73
RTFDC1-209ENST00000487211 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
RTFDC1-209ENST00000487211 CHD1O14646 1710 aa10.52□□□□□ -0.73
RTFDC1-209ENST00000487211 CUX1P39880 1505 aa10.52□□□□□ -0.73
RTFDC1-209ENST00000487211 GOLGA8CPA6NN73 597 aa10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 HRO43593 1189 aa10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
RTFDC1-209ENST00000487211 LILRB3O75022 631 aa10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 GUCA2AQ02747 115 aa10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 FUT2Q10981 343 aa10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 CABLES1Q8TDN4 633 aa10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 HLA-CQ95604 372 aa10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
RTFDC1-209ENST00000487211 KMT5BQ4FZB7 885 aa10.49□□□□□ -0.73
RTFDC1-209ENST00000487211 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
RTFDC1-209ENST00000487211 BANK1Q8NDB2 785 aa10.49□□□□□ -0.73
RTFDC1-209ENST00000487211 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.73
RTFDC1-209ENST00000487211 RTL5Q5HYW3 569 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 PRPF38BQ5VTL8 546 aaKnown RBP10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 ZBTB3Q9H5J0 574 aa10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 SOGA1O94964 1423 aa10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 POLA1P09884 1462 aaPredicted RBP10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
RTFDC1-209ENST00000487211 HRCP23327 699 aa10.47□□□□□ -0.73
RTFDC1-209ENST00000487211 ANKK1Q8NFD2 765 aa10.47□□□□□ -0.73
RTFDC1-209ENST00000487211 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
RTFDC1-209ENST00000487211 CLUAP1Q96AJ1 413 aa10.47□□□□□ -0.73
RTFDC1-209ENST00000487211 SNRKQ9NRH2 765 aa10.47□□□□□ -0.73
RTFDC1-209ENST00000487211 SPDYE5A6NIY4 337 aa10.46□□□□□ -0.73
RTFDC1-209ENST00000487211 AP1G2O75843 785 aa10.46□□□□□ -0.73
RTFDC1-209ENST00000487211 ATP6V1AP38606 617 aa10.46□□□□□ -0.73
RTFDC1-209ENST00000487211 ADGRL1O94910 1474 aa10.46□□□□□ -0.74
RTFDC1-209ENST00000487211 FGD5Q6ZNL6 1462 aa10.46□□□□□ -0.74
RTFDC1-209ENST00000487211 IFT140Q96RY7 1462 aa10.46□□□□□ -0.74
RTFDC1-209ENST00000487211 ZNF608Q9ULD9 1512 aaPredicted RBP10.45□□□□□ -0.74
RTFDC1-209ENST00000487211 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
RTFDC1-209ENST00000487211 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 A6NJR5 290 aa10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 BCAMP50895 628 aa10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 PPP4CP60510 307 aa10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 MTMR2Q13614 643 aa10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 SYNJ1O43426 1573 aa10.43□□□□□ -0.74
RTFDC1-209ENST00000487211 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
RTFDC1-209ENST00000487211 RAD21O60216 631 aa10.42□□□□□ -0.74
RTFDC1-209ENST00000487211 WNT2BQ93097 391 aa10.42□□□□□ -0.74
RTFDC1-209ENST00000487211 HPS5Q9UPZ3 1129 aa10.42□□□□□ -0.74
RTFDC1-209ENST00000487211 TARBP1Q13395 1621 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-209ENST00000487211 PUS10Q3MIT2 529 aaKnown RBP10.41□□□□□ -0.74
RTFDC1-209ENST00000487211 POM121Q96HA1 1249 aa10.41□□□□□ -0.74
RTFDC1-209ENST00000487211 PRR14Q9BWN1 585 aa10.41□□□□□ -0.74
RTFDC1-209ENST00000487211 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
RTFDC1-209ENST00000487211 MORN1Q5T089 497 aa10.4□□□□□ -0.74
RTFDC1-209ENST00000487211 TSC1Q92574 1164 aa10.4□□□□□ -0.74
RTFDC1-209ENST00000487211 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
RTFDC1-209ENST00000487211 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
RTFDC1-209ENST00000487211 TSR3Q9UJK0 312 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-209ENST00000487211 MTMR14Q8NCE2 650 aa10.39□□□□□ -0.75
RTFDC1-209ENST00000487211 SYMPKQ92797 1274 aaKnown RBP10.39□□□□□ -0.75
RTFDC1-209ENST00000487211 USP17L8P0C7I0 530 aa10.38□□□□□ -0.75
RTFDC1-209ENST00000487211 SLC27A5Q9Y2P5 690 aa10.38□□□□□ -0.75
RTFDC1-209ENST00000487211 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
RTFDC1-209ENST00000487211 BIVM-ERCC5R4GMW8 1640 aa10.37□□□□□ -0.75
RTFDC1-209ENST00000487211 TRAK2O60296 914 aa10.37□□□□□ -0.75
RTFDC1-209ENST00000487211 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-209ENST00000487211 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
RTFDC1-209ENST00000487211 ARID3CA6NKF2 412 aa10.36□□□□□ -0.75
RTFDC1-209ENST00000487211 CFAP99D6REC4 459 aa10.36□□□□□ -0.75
RTFDC1-209ENST00000487211 APLP1P51693 650 aa10.36□□□□□ -0.75
RTFDC1-209ENST00000487211 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
RTFDC1-209ENST00000487211 CLASP1Q7Z460 1538 aa10.36□□□□□ -0.75
RTFDC1-209ENST00000487211 ABCA10Q8WWZ4 1543 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms