RNA–Protein interactions for RNA: ENST00000481212.5

SPTA1-205, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-205ENST00000481212 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-205ENST00000481212 TOP2AP11388 1531 aaKnown RBP11.92□□□□□ -0.5
SPTA1-205ENST00000481212 HOXA2O43364 376 aa11.92□□□□□ -0.5
SPTA1-205ENST00000481212 LILRB3O75022 631 aa11.92□□□□□ -0.5
SPTA1-205ENST00000481212 RNF40O75150 1001 aa11.92□□□□□ -0.5
SPTA1-205ENST00000481212 FDX1P10109 184 aa11.92□□□□□ -0.5
SPTA1-205ENST00000481212 MCM6Q14566 821 aa11.92□□□□□ -0.5
SPTA1-205ENST00000481212 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
SPTA1-205ENST00000481212 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
SPTA1-205ENST00000481212 LCE2DQ5TA82 110 aaPredicted RBP11.91□□□□□ -0.5
SPTA1-205ENST00000481212 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
SPTA1-205ENST00000481212 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
SPTA1-205ENST00000481212 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
SPTA1-205ENST00000481212 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
SPTA1-205ENST00000481212 QPCTQ16769 361 aa11.9□□□□□ -0.5
SPTA1-205ENST00000481212 SPDYE5A6NIY4 337 aa11.89□□□□□ -0.51
SPTA1-205ENST00000481212 CFHP08603 1231 aa11.89□□□□□ -0.51
SPTA1-205ENST00000481212 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
SPTA1-205ENST00000481212 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
SPTA1-205ENST00000481212 A6NJR5 290 aa11.88□□□□□ -0.51
SPTA1-205ENST00000481212 HRO43593 1189 aa11.88□□□□□ -0.51
SPTA1-205ENST00000481212 KMT5BQ4FZB7 885 aa11.88□□□□□ -0.51
SPTA1-205ENST00000481212 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
SPTA1-205ENST00000481212 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
SPTA1-205ENST00000481212 RAD21O60216 631 aa11.87□□□□□ -0.51
SPTA1-205ENST00000481212 ATP6V1AP38606 617 aa11.87□□□□□ -0.51
SPTA1-205ENST00000481212 FUT2Q10981 343 aa11.87□□□□□ -0.51
SPTA1-205ENST00000481212 CABLES1Q8TDN4 633 aa11.87□□□□□ -0.51
SPTA1-205ENST00000481212 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
SPTA1-205ENST00000481212 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
SPTA1-205ENST00000481212 HRCP23327 699 aa11.86□□□□□ -0.51
SPTA1-205ENST00000481212 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
SPTA1-205ENST00000481212 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
SPTA1-205ENST00000481212 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPTA1-205ENST00000481212 AP1G2O75843 785 aa11.85□□□□□ -0.51
SPTA1-205ENST00000481212 GUCA2AQ02747 115 aa11.85□□□□□ -0.51
SPTA1-205ENST00000481212 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
SPTA1-205ENST00000481212 HLA-CQ95604 372 aa11.84□□□□□ -0.51
SPTA1-205ENST00000481212 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
SPTA1-205ENST00000481212 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
SPTA1-205ENST00000481212 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
SPTA1-205ENST00000481212 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
SPTA1-205ENST00000481212 PPP4CP60510 307 aa11.83□□□□□ -0.52
SPTA1-205ENST00000481212 MTMR2Q13614 643 aa11.82□□□□□ -0.52
SPTA1-205ENST00000481212 PRR14Q9BWN1 585 aa11.82□□□□□ -0.52
SPTA1-205ENST00000481212 ARHGEF11O15085 1522 aa11.81□□□□□ -0.52
SPTA1-205ENST00000481212 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
SPTA1-205ENST00000481212 TRAK2O60296 914 aa11.81□□□□□ -0.52
SPTA1-205ENST00000481212 SOWAHBA6NEL2 793 aa11.8□□□□□ -0.52
SPTA1-205ENST00000481212 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
SPTA1-205ENST00000481212 PRM3Q9NNZ6 103 aa11.8□□□□□ -0.52
SPTA1-205ENST00000481212 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
SPTA1-205ENST00000481212 APBB1O00213 710 aa11.79□□□□□ -0.52
SPTA1-205ENST00000481212 WNT2BQ93097 391 aa11.79□□□□□ -0.52
SPTA1-205ENST00000481212 ARXQ96QS3 562 aa11.79□□□□□ -0.52
SPTA1-205ENST00000481212 POM121Q96HA1 1249 aa11.78□□□□□ -0.52
SPTA1-205ENST00000481212 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
SPTA1-205ENST00000481212 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
SPTA1-205ENST00000481212 MORN1Q5T089 497 aa11.77□□□□□ -0.53
SPTA1-205ENST00000481212 COG6Q9Y2V7 657 aa11.77□□□□□ -0.53
SPTA1-205ENST00000481212 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
SPTA1-205ENST00000481212 PUS10Q3MIT2 529 aaKnown RBP11.76□□□□□ -0.53
SPTA1-205ENST00000481212 PROSER2Q86WR7 435 aaPredicted RBP11.76□□□□□ -0.53
SPTA1-205ENST00000481212 MTMR14Q8NCE2 650 aa11.76□□□□□ -0.53
SPTA1-205ENST00000481212 SOCS7O14512 581 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 BCAMP50895 628 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 CTDSPL2Q05D32 466 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 Q3C1V9 767 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 HELBQ8NG08 1087 aaPredicted RBP11.75□□□□□ -0.53
SPTA1-205ENST00000481212 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
SPTA1-205ENST00000481212 TSC1Q92574 1164 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 SYMPKQ92797 1274 aaKnown RBP11.75□□□□□ -0.53
SPTA1-205ENST00000481212 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
SPTA1-205ENST00000481212 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
SPTA1-205ENST00000481212 SOGA1O94964 1423 aa11.73□□□□□ -0.53
SPTA1-205ENST00000481212 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
SPTA1-205ENST00000481212 CFAP99D6REC4 459 aa11.72□□□□□ -0.53
SPTA1-205ENST00000481212 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
SPTA1-205ENST00000481212 FNBP4Q8N3X1 1017 aaPredicted RBP11.72□□□□□ -0.53
SPTA1-205ENST00000481212 PRR7Q8TB68 274 aa11.72□□□□□ -0.53
SPTA1-205ENST00000481212 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
SPTA1-205ENST00000481212 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
SPTA1-205ENST00000481212 APLP1P51693 650 aa11.71□□□□□ -0.53
SPTA1-205ENST00000481212 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
SPTA1-205ENST00000481212 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
SPTA1-205ENST00000481212 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.53
SPTA1-205ENST00000481212 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.54
SPTA1-205ENST00000481212 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SPTA1-205ENST00000481212 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
SPTA1-205ENST00000481212 KRTAP3-3Q9BYR6 98 aa11.7□□□□□ -0.54
SPTA1-205ENST00000481212 KRTAP3-2Q9BYR7 98 aa11.7□□□□□ -0.54
SPTA1-205ENST00000481212 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
SPTA1-205ENST00000481212 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
SPTA1-205ENST00000481212 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
SPTA1-205ENST00000481212 ZNF330Q9Y3S2 320 aaPredicted RBP11.69□□□□□ -0.54
SPTA1-205ENST00000481212 NR1I2O75469 434 aa11.68□□□□□ -0.54
SPTA1-205ENST00000481212 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
SPTA1-205ENST00000481212 ABL2P42684 1182 aa11.67□□□□□ -0.54
SPTA1-205ENST00000481212 HOMEZQ8IX15 550 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 243.4 ms