RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 TBC1D2Q9BYX2 928 aa9.22□□□□□ -0.93
VPS45-207ENST00000477558 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
VPS45-207ENST00000477558 CUX1P39880 1505 aa9.21□□□□□ -0.94
VPS45-207ENST00000477558 KDM4AO75164 1064 aa9.21□□□□□ -0.94
VPS45-207ENST00000477558 APLP1P51693 650 aa9.21□□□□□ -0.94
VPS45-207ENST00000477558 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
VPS45-207ENST00000477558 TARBP1Q13395 1621 aaKnown RBP9.19□□□□□ -0.94
VPS45-207ENST00000477558 NDUFV2P19404 249 aa9.19□□□□□ -0.94
VPS45-207ENST00000477558 FUT2Q10981 343 aa9.19□□□□□ -0.94
VPS45-207ENST00000477558 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
VPS45-207ENST00000477558 HLA-CQ95604 372 aa9.19□□□□□ -0.94
VPS45-207ENST00000477558 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
VPS45-207ENST00000477558 BIVM-ERCC5R4GMW8 1640 aa9.18□□□□□ -0.94
VPS45-207ENST00000477558 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
VPS45-207ENST00000477558 POLA1P09884 1462 aaPredicted RBP9.17□□□□□ -0.94
VPS45-207ENST00000477558 IFT140Q96RY7 1462 aa9.17□□□□□ -0.94
VPS45-207ENST00000477558 ACTN4O43707 911 aaKnown RBP9.17□□□□□ -0.94
VPS45-207ENST00000477558 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
VPS45-207ENST00000477558 KMT5BQ4FZB7 885 aa9.17□□□□□ -0.94
VPS45-207ENST00000477558 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
VPS45-207ENST00000477558 RSPH6AQ9H0K4 717 aa9.17□□□□□ -0.94
VPS45-207ENST00000477558 WDR97A6NE52 1622 aa9.17□□□□□ -0.94
VPS45-207ENST00000477558 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
VPS45-207ENST00000477558 NECTIN2Q92692 538 aa9.16□□□□□ -0.94
VPS45-207ENST00000477558 TOP2BQ02880 1626 aa9.15□□□□□ -0.94
VPS45-207ENST00000477558 HOXA2O43364 376 aa9.15□□□□□ -0.94
VPS45-207ENST00000477558 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
VPS45-207ENST00000477558 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
VPS45-207ENST00000477558 RIC3Q7Z5B4 369 aa9.15□□□□□ -0.94
VPS45-207ENST00000477558 LIMD1Q9UGP4 676 aa9.15□□□□□ -0.94
VPS45-207ENST00000477558 ATP6V1AP38606 617 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 KCNC4Q03721 635 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 DIXDC1Q155Q3 683 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 SYNJ1O43426 1573 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 USP46P62068 366 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 PCDHB15Q9Y5E8 787 aa9.14□□□□□ -0.95
VPS45-207ENST00000477558 FGD5Q6ZNL6 1462 aa9.13□□□□□ -0.95
VPS45-207ENST00000477558 SPTLC1O15269 473 aa9.13□□□□□ -0.95
VPS45-207ENST00000477558 RSBN1LQ6PCB5 846 aaPredicted RBP9.13□□□□□ -0.95
VPS45-207ENST00000477558 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
VPS45-207ENST00000477558 EIF4G3O43432 1585 aaKnown RBP9.12□□□□□ -0.95
VPS45-207ENST00000477558 WRNQ14191 1432 aaPredicted RBP eCLIP9.12□□□□□ -0.95
VPS45-207ENST00000477558 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
VPS45-207ENST00000477558 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
VPS45-207ENST00000477558 MORN1Q5T089 497 aa9.12□□□□□ -0.95
VPS45-207ENST00000477558 PRR14Q9BWN1 585 aa9.12□□□□□ -0.95
VPS45-207ENST00000477558 ATP1B4Q9UN42 357 aaPredicted RBP9.12□□□□□ -0.95
VPS45-207ENST00000477558 PCDHB3Q9Y5E6 796 aa9.12□□□□□ -0.95
VPS45-207ENST00000477558 ZNF608Q9ULD9 1512 aaPredicted RBP9.11□□□□□ -0.95
VPS45-207ENST00000477558 FDX1P10109 184 aa9.11□□□□□ -0.95
VPS45-207ENST00000477558 GRIPAP1Q4V328 841 aa9.11□□□□□ -0.95
VPS45-207ENST00000477558 FBXO31Q5XUX0 539 aaPredicted RBP9.11□□□□□ -0.95
VPS45-207ENST00000477558 BLOC1S3Q6QNY0 202 aa9.11□□□□□ -0.95
VPS45-207ENST00000477558 Q6ZNB5 142 aa9.11□□□□□ -0.95
VPS45-207ENST00000477558 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
VPS45-207ENST00000477558 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
VPS45-207ENST00000477558 COPS2P61201 443 aa9.1□□□□□ -0.95
VPS45-207ENST00000477558 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.95
VPS45-207ENST00000477558 SYMPKQ92797 1274 aaKnown RBP9.09□□□□□ -0.95
VPS45-207ENST00000477558 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS45-207ENST00000477558 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
VPS45-207ENST00000477558 QPCTQ16769 361 aa9.08□□□□□ -0.96
VPS45-207ENST00000477558 SCUBE3Q8IX30 993 aa9.08□□□□□ -0.96
VPS45-207ENST00000477558 RAD54L2Q9Y4B4 1467 aa9.08□□□□□ -0.96
VPS45-207ENST00000477558 GJA5P36382 358 aa9.07□□□□□ -0.96
VPS45-207ENST00000477558 CABLES1Q8TDN4 633 aa9.07□□□□□ -0.96
VPS45-207ENST00000477558 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
VPS45-207ENST00000477558 MTRQ99707 1265 aa9.06□□□□□ -0.96
VPS45-207ENST00000477558 SOGA1O94964 1423 aa9.06□□□□□ -0.96
VPS45-207ENST00000477558 LAPTM4AQ15012 233 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 TUSC1Q2TAM9 212 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 RTL5Q5HYW3 569 aaPredicted RBP9.05□□□□□ -0.96
VPS45-207ENST00000477558 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 LILRB3O75022 631 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 NR1I2O75469 434 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 HRCP23327 699 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 RNF19BQ6ZMZ0 732 aa9.05□□□□□ -0.96
VPS45-207ENST00000477558 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
VPS45-207ENST00000477558 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
VPS45-207ENST00000477558 NUTM2BA6NNL0 878 aaPredicted RBP9.03□□□□□ -0.96
VPS45-207ENST00000477558 NUTM2EB1AL46 878 aaPredicted RBP9.03□□□□□ -0.96
VPS45-207ENST00000477558 NUTM2DQ5VT03 806 aaPredicted RBP9.03□□□□□ -0.96
VPS45-207ENST00000477558 BRICD5Q6PL45 260 aa9.03□□□□□ -0.96
VPS45-207ENST00000477558 NUTM2AQ8IVF1 878 aaPredicted RBP9.03□□□□□ -0.96
VPS45-207ENST00000477558 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
VPS45-207ENST00000477558 ZPR1O75312 459 aa9.02□□□□□ -0.97
VPS45-207ENST00000477558 MTMR2Q13614 643 aa9.02□□□□□ -0.97
VPS45-207ENST00000477558 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
VPS45-207ENST00000477558 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
VPS45-207ENST00000477558 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
VPS45-207ENST00000477558 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS45-207ENST00000477558 TLL1O43897 1013 aa9.01□□□□□ -0.97
VPS45-207ENST00000477558 Q3C1V9 767 aa9.01□□□□□ -0.97
VPS45-207ENST00000477558 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
VPS45-207ENST00000477558 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
VPS45-207ENST00000477558 MAGI1Q96QZ7 1491 aaPredicted RBP9□□□□□ -0.97
VPS45-207ENST00000477558 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
VPS45-207ENST00000477558 RFC5P40937 340 aa9□□□□□ -0.97
VPS45-207ENST00000477558 PPP2R2DQ66LE6 453 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms