RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
SPEN-202ENST00000438066 BAZ1BQ9UIG0 1483 aaKnown RBP10□□□□□ -0.81
SPEN-202ENST00000438066 FDX1P10109 184 aa9.99□□□□□ -0.81
SPEN-202ENST00000438066 TSC1Q92574 1164 aa9.99□□□□□ -0.81
SPEN-202ENST00000438066 TRIM34Q9BYJ4 488 aa9.99□□□□□ -0.81
SPEN-202ENST00000438066 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
SPEN-202ENST00000438066 SMAPO00193 183 aa9.99□□□□□ -0.81
SPEN-202ENST00000438066 HOXA2O43364 376 aa9.99□□□□□ -0.81
SPEN-202ENST00000438066 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
SPEN-202ENST00000438066 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
SPEN-202ENST00000438066 LMOD1P29536 600 aaPredicted RBP9.97□□□□□ -0.81
SPEN-202ENST00000438066 HLA-CQ95604 372 aa9.97□□□□□ -0.81
SPEN-202ENST00000438066 PCDHGC3Q9UN70 934 aa9.97□□□□□ -0.81
SPEN-202ENST00000438066 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.81
SPEN-202ENST00000438066 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.81
SPEN-202ENST00000438066 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.81
SPEN-202ENST00000438066 LHX6Q9UPM6 363 aa9.96□□□□□ -0.81
SPEN-202ENST00000438066 USP46P62068 366 aa9.96□□□□□ -0.82
SPEN-202ENST00000438066 PPP4R3BQ5MIZ7 849 aa9.96□□□□□ -0.82
SPEN-202ENST00000438066 PACS2Q86VP3 889 aa9.96□□□□□ -0.82
SPEN-202ENST00000438066 TRIM6-TRIM34B2RNG4 842 aa9.95□□□□□ -0.82
SPEN-202ENST00000438066 GCGRP47871 477 aa9.95□□□□□ -0.82
SPEN-202ENST00000438066 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
SPEN-202ENST00000438066 ALG2Q9H553 416 aa9.95□□□□□ -0.82
SPEN-202ENST00000438066 NCAPD3P42695 1498 aa9.95□□□□□ -0.82
SPEN-202ENST00000438066 PTPREP23469 700 aa9.94□□□□□ -0.82
SPEN-202ENST00000438066 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
SPEN-202ENST00000438066 CDCA8Q53HL2 280 aa9.94□□□□□ -0.82
SPEN-202ENST00000438066 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
SPEN-202ENST00000438066 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
SPEN-202ENST00000438066 MTMR2Q13614 643 aa9.93□□□□□ -0.82
SPEN-202ENST00000438066 GPR153Q6NV75 609 aa9.93□□□□□ -0.82
SPEN-202ENST00000438066 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
SPEN-202ENST00000438066 UCN2Q96RP3 112 aa9.93□□□□□ -0.82
SPEN-202ENST00000438066 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
SPEN-202ENST00000438066 PRR7Q8TB68 274 aa9.92□□□□□ -0.82
SPEN-202ENST00000438066 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
SPEN-202ENST00000438066 PROX2Q3B8N5 592 aa9.91□□□□□ -0.82
SPEN-202ENST00000438066 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
SPEN-202ENST00000438066 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
SPEN-202ENST00000438066 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
SPEN-202ENST00000438066 VRTNQ9H8Y1 702 aa9.9□□□□□ -0.83
SPEN-202ENST00000438066 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
SPEN-202ENST00000438066 SLC10A3P09131 477 aa9.89□□□□□ -0.83
SPEN-202ENST00000438066 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
SPEN-202ENST00000438066 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
SPEN-202ENST00000438066 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
SPEN-202ENST00000438066 E9PSI1 815 aa9.88□□□□□ -0.83
SPEN-202ENST00000438066 POTEHQ6S545 545 aa9.88□□□□□ -0.83
SPEN-202ENST00000438066 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
SPEN-202ENST00000438066 SEMA3FQ13275 785 aa9.87□□□□□ -0.83
SPEN-202ENST00000438066 PSDA5PKW4 1024 aaPredicted RBP9.87□□□□□ -0.83
SPEN-202ENST00000438066 ATG7O95352 703 aa9.87□□□□□ -0.83
SPEN-202ENST00000438066 MAFBQ9Y5Q3 323 aaPredicted RBP9.87□□□□□ -0.83
SPEN-202ENST00000438066 NR6A1Q15406 480 aa9.86□□□□□ -0.83
SPEN-202ENST00000438066 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
SPEN-202ENST00000438066 CC2D2AQ9P2K1 1620 aa9.86□□□□□ -0.83
SPEN-202ENST00000438066 SOX11P35716 441 aa9.85□□□□□ -0.83
SPEN-202ENST00000438066 SWT1Q5T5J6 900 aaKnown RBP9.85□□□□□ -0.83
SPEN-202ENST00000438066 TBC1D9Q6ZT07 1266 aa9.85□□□□□ -0.83
SPEN-202ENST00000438066 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
SPEN-202ENST00000438066 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
SPEN-202ENST00000438066 FUT2Q10981 343 aa9.83□□□□□ -0.84
SPEN-202ENST00000438066 SLF2Q8IX21 1173 aa9.83□□□□□ -0.84
SPEN-202ENST00000438066 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
SPEN-202ENST00000438066 IGSF3O75054 1194 aa9.82□□□□□ -0.84
SPEN-202ENST00000438066 PRDM2Q13029 1718 aa9.82□□□□□ -0.84
SPEN-202ENST00000438066 PER1O15534 1290 aaPredicted RBP9.82□□□□□ -0.84
SPEN-202ENST00000438066 MYT1LQ9UL68 1186 aa9.81□□□□□ -0.84
SPEN-202ENST00000438066 AMOTL2Q9Y2J4 779 aa9.81□□□□□ -0.84
SPEN-202ENST00000438066 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
SPEN-202ENST00000438066 ATP9BO43861 1147 aa9.8□□□□□ -0.84
SPEN-202ENST00000438066 GRIPAP1Q4V328 841 aa9.8□□□□□ -0.84
SPEN-202ENST00000438066 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
SPEN-202ENST00000438066 EIF4G2P78344 907 aaKnown RBP eCLIP9.79□□□□□ -0.84
SPEN-202ENST00000438066 SYNJ1O43426 1573 aa9.79□□□□□ -0.84
SPEN-202ENST00000438066 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
SPEN-202ENST00000438066 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
SPEN-202ENST00000438066 CFTRP13569 1480 aa9.77□□□□□ -0.85
SPEN-202ENST00000438066 CFHP08603 1231 aa9.76□□□□□ -0.85
SPEN-202ENST00000438066 HDGFP51858 240 aaKnown RBP9.76□□□□□ -0.85
SPEN-202ENST00000438066 KANK4Q5T7N3 995 aaPredicted RBP9.76□□□□□ -0.85
SPEN-202ENST00000438066 GNEQ9Y223 722 aaKnown RBP9.76□□□□□ -0.85
SPEN-202ENST00000438066 PIK3CDO00329 1044 aa9.76□□□□□ -0.85
SPEN-202ENST00000438066 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
SPEN-202ENST00000438066 STK32AQ8WU08 396 aa9.76□□□□□ -0.85
SPEN-202ENST00000438066 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
SPEN-202ENST00000438066 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
SPEN-202ENST00000438066 ATP6V1AP38606 617 aa9.75□□□□□ -0.85
SPEN-202ENST00000438066 SLC4A3P48751 1232 aa9.75□□□□□ -0.85
SPEN-202ENST00000438066 TMEM164Q5U3C3 297 aa9.75□□□□□ -0.85
SPEN-202ENST00000438066 ZMIZ1Q9ULJ6 1067 aa9.75□□□□□ -0.85
SPEN-202ENST00000438066 BIVM-ERCC5R4GMW8 1640 aa9.75□□□□□ -0.85
SPEN-202ENST00000438066 TOP2BQ02880 1626 aa9.74□□□□□ -0.85
SPEN-202ENST00000438066 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
SPEN-202ENST00000438066 RNF40O75150 1001 aa9.73□□□□□ -0.85
SPEN-202ENST00000438066 FBXO45P0C2W1 286 aa9.73□□□□□ -0.85
SPEN-202ENST00000438066 NR1H3Q13133 447 aa9.73□□□□□ -0.85
SPEN-202ENST00000438066 NOVA2Q9UNW9 492 aaKnown RBP9.73□□□□□ -0.85
SPEN-202ENST00000438066 PSEN2P49810 448 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms