RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 KIF3AQ9Y496 699 aa7.77□□□□□ -1.17
PTPN3-202ENST00000374541 ARHGEF11O15085 1522 aa7.77□□□□□ -1.17
PTPN3-202ENST00000374541 CAPN15O75808 1086 aa7.77□□□□□ -1.17
PTPN3-202ENST00000374541 VPS53Q5VIR6 699 aa7.77□□□□□ -1.17
PTPN3-202ENST00000374541 C19orf44Q9H6X5 657 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 PHF8Q9UPP1 1060 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 RFC4P35249 363 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 PRAM1Q96QH2 718 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 RBM19Q9Y4C8 960 aaKnown RBP7.76□□□□□ -1.17
PTPN3-202ENST00000374541 DDB1Q16531 1140 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 MPHOSPH9Q99550 1183 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 BCL2L13Q9BXK5 485 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 ERICH3Q5RHP9 1530 aa7.76□□□□□ -1.17
PTPN3-202ENST00000374541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTPN3-202ENST00000374541 ZNF644Q9H582 1327 aaPredicted RBP7.76□□□□□ -1.17
PTPN3-202ENST00000374541 WDR62O43379 1518 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 NEXNQ0ZGT2 675 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 TCEAL9Q9UHQ7 104 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
PTPN3-202ENST00000374541 PLEKHO1Q53GL0 409 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-202ENST00000374541 TSPOAP1O95153 1857 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 B4GALNT3Q6L9W6 998 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 ACSBG1Q96GR2 724 aa7.75□□□□□ -1.17
PTPN3-202ENST00000374541 BIN2Q9UBW5 565 aaPredicted RBP7.75□□□□□ -1.17
PTPN3-202ENST00000374541 CEP89Q96ST8 783 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 TMOD3Q9NYL9 352 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 PARP3Q9Y6F1 533 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 HSP90AA2PQ14568 343 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-202ENST00000374541 GPATCH3Q96I76 525 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 KDM6BO15054 1643 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 SKOR2Q2VWA4 1001 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-202ENST00000374541 CCDC70Q6NSX1 233 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 IL27Q8NEV9 243 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 FAM98CQ17RN3 349 aaKnown RBP7.74□□□□□ -1.17
PTPN3-202ENST00000374541 KCNH5Q8NCM2 988 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 SLAIN2Q9P270 581 aa7.74□□□□□ -1.17
PTPN3-202ENST00000374541 KTN1Q86UP2 1357 aaKnown RBP7.74□□□□□ -1.17
PTPN3-202ENST00000374541 ARAP1Q96P48 1450 aa7.73□□□□□ -1.17
PTPN3-202ENST00000374541 AMER1Q5JTC6 1135 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-202ENST00000374541 MPRIPQ6WCQ1 1025 aa7.73□□□□□ -1.17
PTPN3-202ENST00000374541 HMMRO75330 724 aa7.73□□□□□ -1.17
PTPN3-202ENST00000374541 LMOD3Q0VAK6 560 aa7.73□□□□□ -1.17
PTPN3-202ENST00000374541 IPO9Q96P70 1041 aaKnown RBP7.73□□□□□ -1.17
PTPN3-202ENST00000374541 WDR7Q9Y4E6 1490 aa7.73□□□□□ -1.17
PTPN3-202ENST00000374541 CNTLNQ9NXG0 1405 aa7.73□□□□□ -1.17
PTPN3-202ENST00000374541 MIA2Q96PC5 1412 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 RALBP1Q15311 655 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 ZNF652Q9Y2D9 606 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 CHRNA2Q15822 529 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-202ENST00000374541 MYOM3Q5VTT5 1437 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 NF2P35240 595 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 CABP2Q9NPB3 220 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 ATP6V1DQ9Y5K8 247 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 ZNF408Q9H9D4 720 aa7.72□□□□□ -1.17
PTPN3-202ENST00000374541 SENP3-EIF4A1A0A087X0R7 540 aa7.71□□□□□ -1.17
PTPN3-202ENST00000374541 CDK19Q9BWU1 502 aa7.71□□□□□ -1.17
PTPN3-202ENST00000374541 TMOD2Q9NZR1 351 aa7.71□□□□□ -1.17
PTPN3-202ENST00000374541 SETD5Q9C0A6 1442 aa7.71□□□□□ -1.17
PTPN3-202ENST00000374541 IQGAP2Q13576 1575 aa7.71□□□□□ -1.18
PTPN3-202ENST00000374541 RPGRQ92834 1020 aaKnown RBP7.71□□□□□ -1.18
PTPN3-202ENST00000374541 TOMM22Q9NS69 142 aa7.71□□□□□ -1.18
PTPN3-202ENST00000374541 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
PTPN3-202ENST00000374541 PBRM1Q86U86 1689 aa7.71□□□□□ -1.18
PTPN3-202ENST00000374541 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 ST18O60284 1047 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 HSPA1LP34931 641 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 DDX58O95786 925 aaKnown RBP7.7□□□□□ -1.18
PTPN3-202ENST00000374541 SLC4A3P48751 1232 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 EAPPQ56P03 285 aaPredicted RBP7.7□□□□□ -1.18
PTPN3-202ENST00000374541 JDP2Q8WYK2 163 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 TPM1P09493 284 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 SAMD9Q5K651 1589 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 ROCK1Q13464 1354 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 TEX35Q5T0J7 233 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 BTG4Q9NY30 223 aa7.7□□□□□ -1.18
PTPN3-202ENST00000374541 RRP7AQ9Y3A4 280 aaKnown RBP7.7□□□□□ -1.18
PTPN3-202ENST00000374541 C11orf95C9JLR9 678 aaPredicted RBP7.7□□□□□ -1.18
PTPN3-202ENST00000374541 RTEL1-TNFRSF6BF6WH68 1400 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 STARD3NLO95772 234 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 ST5P78524 1137 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
PTPN3-202ENST00000374541 RCAN3Q9UKA8 241 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 SPDYE4A6NLX3 237 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 CDR1P51861 262 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 SLC4A10Q6U841 1118 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 CENPJQ9HC77 1338 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-202ENST00000374541 ZMYM3Q14202 1370 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 ZNF692Q9BU19 519 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-202ENST00000374541 CGNL1Q0VF96 1302 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 ZNF335Q9H4Z2 1342 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-202ENST00000374541 KIF16BQ96L93 1317 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 TPM2P07951 284 aa7.69□□□□□ -1.18
PTPN3-202ENST00000374541 PSDA5PKW4 1024 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-202ENST00000374541 TMEM87AQ8NBN3 555 aa7.68□□□□□ -1.18
PTPN3-202ENST00000374541 BCS1LQ9Y276 419 aa7.68□□□□□ -1.18
PTPN3-202ENST00000374541 AIMP1Q12904 312 aaKnown RBP7.68□□□□□ -1.18
PTPN3-202ENST00000374541 ST20-MTHFSA0A0A6YYL1 179 aa7.68□□□□□ -1.18
PTPN3-202ENST00000374541 MTHFSP49914 203 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms