RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SMC3Q9UQE7 1217 aa14.71□□□□□ -0.06
COL8A1-201ENST00000261037 WASHC4Q2M389 1173 aa14.7□□□□□ -0.06
COL8A1-201ENST00000261037 RNF20Q5VTR2 975 aa14.7□□□□□ -0.06
COL8A1-201ENST00000261037 INTS3Q68E01 1043 aaKnown RBP14.7□□□□□ -0.06
COL8A1-201ENST00000261037 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
COL8A1-201ENST00000261037 FAM177BA6PVY3 158 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 RBM33Q96EV2 1170 aaKnown RBP14.69□□□□□ -0.06
COL8A1-201ENST00000261037 NLRP2Q9NX02 1062 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 CCDC47Q96A33 483 aaKnown RBP14.69□□□□□ -0.06
COL8A1-201ENST00000261037 USP35Q9P2H5 1018 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 CCDC70Q6NSX1 233 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 ZNF428Q96B54 188 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
COL8A1-201ENST00000261037 CASKIN1Q8WXD9 1431 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 HOMER1Q86YM7 354 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 RAPGEF4Q8WZA2 1011 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 GNAI1P63096 354 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 FAM69CQ0P6D2 419 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 KIF7Q2M1P5 1343 aa14.68□□□□□ -0.06
COL8A1-201ENST00000261037 CWC22Q9HCG8 908 aaKnown RBP14.67□□□□□ -0.06
COL8A1-201ENST00000261037 LRRC9Q6ZRR7 1453 aa14.67□□□□□ -0.06
COL8A1-201ENST00000261037 ATF3P18847 181 aa14.67□□□□□ -0.06
COL8A1-201ENST00000261037 ANKRD20A12PQ8NF67 263 aa14.66□□□□□ -0.06
COL8A1-201ENST00000261037 SASS6Q6UVJ0 657 aa14.66□□□□□ -0.06
COL8A1-201ENST00000261037 CCDC43Q96MW1 224 aaKnown RBP14.66□□□□□ -0.06
COL8A1-201ENST00000261037 CHMP5Q9NZZ3 219 aa14.66□□□□□ -0.06
COL8A1-201ENST00000261037 ERC2O15083 957 aa14.66□□□□□ -0.06
COL8A1-201ENST00000261037 NAP1L1P55209 391 aaKnown RBP14.65□□□□□ -0.06
COL8A1-201ENST00000261037 C22orf23Q9BZE7 217 aa14.65□□□□□ -0.06
COL8A1-201ENST00000261037 IPO7O95373 1038 aaKnown RBP14.65□□□□□ -0.06
COL8A1-201ENST00000261037 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
COL8A1-201ENST00000261037 ZNF771Q7L3S4 317 aaPredicted RBP14.65□□□□□ -0.06
COL8A1-201ENST00000261037 HOOK1Q9UJC3 728 aaKnown RBP14.65□□□□□ -0.06
COL8A1-201ENST00000261037 CCDC7Q96M83 1385 aa14.65□□□□□ -0.06
COL8A1-201ENST00000261037 SETQ01105 290 aaPredicted RBP14.65□□□□□ -0.06
COL8A1-201ENST00000261037 DNAJC2Q99543 621 aaKnown RBP14.64□□□□□ -0.07
COL8A1-201ENST00000261037 POLA1P09884 1462 aaPredicted RBP14.64□□□□□ -0.07
COL8A1-201ENST00000261037 FYCO1Q9BQS8 1478 aa14.64□□□□□ -0.07
COL8A1-201ENST00000261037 C1orf115Q9H7X2 142 aa14.64□□□□□ -0.07
COL8A1-201ENST00000261037 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
COL8A1-201ENST00000261037 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
COL8A1-201ENST00000261037 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
COL8A1-201ENST00000261037 GPS2Q13227 327 aa14.63□□□□□ -0.07
COL8A1-201ENST00000261037 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
COL8A1-201ENST00000261037 RSPH6AQ9H0K4 717 aa14.62□□□□□ -0.07
COL8A1-201ENST00000261037 NLRP6P59044 892 aa14.62□□□□□ -0.07
COL8A1-201ENST00000261037 SAFBQ15424 915 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL8A1-201ENST00000261037 HSP90AB4PQ58FF6 505 aa14.62□□□□□ -0.07
COL8A1-201ENST00000261037 FSD1Q9BTV5 496 aa14.62□□□□□ -0.07
COL8A1-201ENST00000261037 ADAMTS8Q9UP79 889 aa14.62□□□□□ -0.07
COL8A1-201ENST00000261037 CDC45O75419 566 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 CCDC73Q6ZRK6 1079 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 MIA2Q96PC5 1412 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 EFCAB5A4FU69 1503 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 CNTLNQ9NXG0 1405 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 FAM13BQ9NYF5 915 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 NCOA2Q15596 1464 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 IFT57Q9NWB7 429 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 PDILTQ8N807 584 aa14.61□□□□□ -0.07
COL8A1-201ENST00000261037 NINLQ9Y2I6 1382 aa14.6□□□□□ -0.07
COL8A1-201ENST00000261037 MTHFSP49914 203 aa14.6□□□□□ -0.07
COL8A1-201ENST00000261037 PRG4Q92954 1404 aaPredicted RBP14.6□□□□□ -0.07
COL8A1-201ENST00000261037 RBM42Q9BTD8 480 aaKnown RBP14.6□□□□□ -0.07
COL8A1-201ENST00000261037 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
COL8A1-201ENST00000261037 CDCA7LQ96GN5 454 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
COL8A1-201ENST00000261037 CNTROBQ8N137 903 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 STK11IPQ8N1F8 1099 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 ARHGAP5Q13017 1502 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 IKQ13123 557 aaPredicted RBP14.59□□□□□ -0.07
COL8A1-201ENST00000261037 ESCO1Q5FWF5 840 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 TTLL5Q6EMB2 1281 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 ABTB2Q8N961 1025 aa14.59□□□□□ -0.07
COL8A1-201ENST00000261037 PRXQ9BXM0 1461 aa14.58□□□□□ -0.07
COL8A1-201ENST00000261037 NUCB2P80303 420 aa14.58□□□□□ -0.07
COL8A1-201ENST00000261037 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.07
COL8A1-201ENST00000261037 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
COL8A1-201ENST00000261037 ATP2B1P20020 1258 aa14.57□□□□□ -0.08
COL8A1-201ENST00000261037 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
COL8A1-201ENST00000261037 SURF6O75683 361 aaKnown RBP14.57□□□□□ -0.08
COL8A1-201ENST00000261037 CT47A1Q5JQC4 288 aaPredicted RBP14.57□□□□□ -0.08
COL8A1-201ENST00000261037 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
COL8A1-201ENST00000261037 VSIG10Q8N0Z9 540 aa14.57□□□□□ -0.08
COL8A1-201ENST00000261037 BRMS1Q9HCU9 246 aa14.57□□□□□ -0.08
COL8A1-201ENST00000261037 EPS15P42566 896 aa14.56□□□□□ -0.08
COL8A1-201ENST00000261037 RRP12Q5JTH9 1297 aaKnown RBP14.56□□□□□ -0.08
COL8A1-201ENST00000261037 OLFM4Q6UX06 510 aa14.56□□□□□ -0.08
COL8A1-201ENST00000261037 MAP4K4O95819 1239 aaPredicted RBP14.56□□□□□ -0.08
COL8A1-201ENST00000261037 PRKAR2BP31323 418 aa14.56□□□□□ -0.08
COL8A1-201ENST00000261037 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
COL8A1-201ENST00000261037 FANCIQ9NVI1 1328 aa14.56□□□□□ -0.08
COL8A1-201ENST00000261037 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
COL8A1-201ENST00000261037 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
COL8A1-201ENST00000261037 KIF6Q6ZMV9 814 aa14.55□□□□□ -0.08
COL8A1-201ENST00000261037 TCP11L2Q8N4U5 519 aa14.55□□□□□ -0.08
COL8A1-201ENST00000261037 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
COL8A1-201ENST00000261037 CEBPZQ03701 1054 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms